RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 CCDC87Q9NVE4 849 aa15.18■□□□□ 0.02
TRAF3IP1-204ENST00000462122 SALL2Q9Y467 1007 aaPredicted RBP15.18■□□□□ 0.02
TRAF3IP1-204ENST00000462122 GIGYF1O75420 1035 aaPredicted RBP15.17■□□□□ 0.02
TRAF3IP1-204ENST00000462122 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
TRAF3IP1-204ENST00000462122 CASZ1Q86V15 1759 aa15.16■□□□□ 0.02
TRAF3IP1-204ENST00000462122 TUBGCP6Q96RT7 1819 aa15.16■□□□□ 0.02
TRAF3IP1-204ENST00000462122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.16■□□□□ 0.02
TRAF3IP1-204ENST00000462122 INTS5Q6P9B9 1019 aaKnown RBP15.16■□□□□ 0.02
TRAF3IP1-204ENST00000462122 SLC16A10Q8TF71 515 aa15.16■□□□□ 0.02
TRAF3IP1-204ENST00000462122 MBIPQ9NS73 344 aa15.16■□□□□ 0.02
TRAF3IP1-204ENST00000462122 SRCAPQ6ZRS2 3230 aa15.16■□□□□ 0.02
TRAF3IP1-204ENST00000462122 UBR3Q6ZT12 1888 aa15.16■□□□□ 0.02
TRAF3IP1-204ENST00000462122 PHF14O94880 888 aa15.15■□□□□ 0.02
TRAF3IP1-204ENST00000462122 TRAPPC3LQ5T215 181 aa15.15■□□□□ 0.02
TRAF3IP1-204ENST00000462122 COL23A1Q86Y22 540 aaPredicted RBP15.15■□□□□ 0.02
TRAF3IP1-204ENST00000462122 ZBTB1Q9Y2K1 713 aa15.15■□□□□ 0.02
TRAF3IP1-204ENST00000462122 USP16Q9Y5T5 823 aa15.15■□□□□ 0.02
TRAF3IP1-204ENST00000462122 ZNF521Q96K83 1311 aa15.15■□□□□ 0.02
TRAF3IP1-204ENST00000462122 LAMB4A4D0S4 1761 aa15.14■□□□□ 0.01
TRAF3IP1-204ENST00000462122 PRAMEF22A3QJZ6 481 aa15.14■□□□□ 0.01
TRAF3IP1-204ENST00000462122 HOXB7P09629 217 aa15.14■□□□□ 0.01
TRAF3IP1-204ENST00000462122 AMIGO3Q86WK7 504 aa15.14■□□□□ 0.01
TRAF3IP1-204ENST00000462122 MTFR1LQ9H019 292 aa15.14■□□□□ 0.01
TRAF3IP1-204ENST00000462122 SOS1Q07889 1333 aaPredicted RBP15.14■□□□□ 0.01
TRAF3IP1-204ENST00000462122 MYH14Q7Z406 1995 aaKnown RBP15.13■□□□□ 0.01
TRAF3IP1-204ENST00000462122 IL6STP40189 918 aaPredicted RBP15.13■□□□□ 0.01
TRAF3IP1-204ENST00000462122 PDGFDQ9GZP0 370 aaPredicted RBP15.13■□□□□ 0.01
TRAF3IP1-204ENST00000462122 CANXP27824 592 aaKnown RBP15.12■□□□□ 0.01
TRAF3IP1-204ENST00000462122 NPM2Q86SE8 214 aaKnown RBP15.12■□□□□ 0.01
TRAF3IP1-204ENST00000462122 MYH16Q9H6N6 1097 aa15.12■□□□□ 0.01
TRAF3IP1-204ENST00000462122 ERBB4Q15303 1308 aa15.12■□□□□ 0.01
TRAF3IP1-204ENST00000462122 COL15A1P39059 1388 aa15.11■□□□□ 0.01
TRAF3IP1-204ENST00000462122 A0A087WZG4 1122 aa15.11■□□□□ 0.01
TRAF3IP1-204ENST00000462122 ZBTB7AO95365 584 aa15.11■□□□□ 0.01
TRAF3IP1-204ENST00000462122 A1BGP04217 495 aa15.11■□□□□ 0.01
TRAF3IP1-204ENST00000462122 RFC4P35249 363 aa15.11■□□□□ 0.01
TRAF3IP1-204ENST00000462122 EIF5P55010 431 aaKnown RBP15.11■□□□□ 0.01
TRAF3IP1-204ENST00000462122 ARHGEF1Q92888 912 aaKnown RBP15.11■□□□□ 0.01
TRAF3IP1-204ENST00000462122 TSR2Q969E8 191 aaKnown RBP15.11■□□□□ 0.01
TRAF3IP1-204ENST00000462122 CHMP4AQ9BY43 222 aa15.11■□□□□ 0.01
TRAF3IP1-204ENST00000462122 SPON1Q9HCB6 807 aa15.11■□□□□ 0.01
TRAF3IP1-204ENST00000462122 FANCIQ9NVI1 1328 aa15.11■□□□□ 0.01
TRAF3IP1-204ENST00000462122 GOLGA2Q08379 1002 aa15.1■□□□□ 0.01
TRAF3IP1-204ENST00000462122 SMIM5Q71RC9 77 aa15.1■□□□□ 0.01
TRAF3IP1-204ENST00000462122 KRT24Q2M2I5 525 aa15.09■□□□□ 0.01
TRAF3IP1-204ENST00000462122 HDGFL1Q5TGJ6 251 aa15.09■□□□□ 0.01
TRAF3IP1-204ENST00000462122 DUSP27Q5VZP5 1158 aa15.09■□□□□ 0.01
TRAF3IP1-204ENST00000462122 USP42Q9H9J4 1324 aaKnown RBP15.09■□□□□ 0.01
TRAF3IP1-204ENST00000462122 LRP5O75197 1615 aa15.08■□□□□ 0
TRAF3IP1-204ENST00000462122 NBPF26B4DH59 902 aa15.08■□□□□ 0
TRAF3IP1-204ENST00000462122 E9PSI1 815 aa15.08■□□□□ 0
TRAF3IP1-204ENST00000462122 ZPR1O75312 459 aa15.08■□□□□ 0
TRAF3IP1-204ENST00000462122 EIF2S2P20042 333 aaKnown RBP15.08■□□□□ 0
TRAF3IP1-204ENST00000462122 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
TRAF3IP1-204ENST00000462122 NBPF10Q6P3W6 841 aaKnown RBP15.08■□□□□ 0
TRAF3IP1-204ENST00000462122 NBPF15Q8N660 670 aa15.08■□□□□ 0
TRAF3IP1-204ENST00000462122 ZNF330Q9Y3S2 320 aaPredicted RBP15.08■□□□□ 0
TRAF3IP1-204ENST00000462122 C4AP0C0L4 1744 aa15.08■□□□□ 0
TRAF3IP1-204ENST00000462122 POLD1P28340 1107 aa15.07■□□□□ 0
TRAF3IP1-204ENST00000462122 NLGN1Q8N2Q7 840 aa15.07■□□□□ 0
TRAF3IP1-204ENST00000462122 SPINK5Q9NQ38 1064 aaPredicted RBP15.07■□□□□ 0
TRAF3IP1-204ENST00000462122 NARFQ9UHQ1 456 aa15.07■□□□□ 0
TRAF3IP1-204ENST00000462122 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
TRAF3IP1-204ENST00000462122 GYS1P13807 737 aa15.06■□□□□ 0
TRAF3IP1-204ENST00000462122 PIP4K2AP48426 406 aaPredicted RBP15.06■□□□□ 0
TRAF3IP1-204ENST00000462122 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
TRAF3IP1-204ENST00000462122 C8orf58Q8NAV2 365 aa15.06■□□□□ 0
TRAF3IP1-204ENST00000462122 ELL2O00472 640 aaPredicted RBP15.05■□□□□ -0
TRAF3IP1-204ENST00000462122 RGL2O15211 777 aa15.05■□□□□ -0
TRAF3IP1-204ENST00000462122 MYL6BP14649 208 aa15.05■□□□□ -0
TRAF3IP1-204ENST00000462122 PTGER2P43116 358 aa15.05■□□□□ -0
TRAF3IP1-204ENST00000462122 TWISTNBQ3B726 338 aaPredicted RBP15.05■□□□□ -0
TRAF3IP1-204ENST00000462122 USPL1Q5W0Q7 1092 aa15.05■□□□□ -0
TRAF3IP1-204ENST00000462122 MSL1Q68DK7 614 aa15.05■□□□□ -0
TRAF3IP1-204ENST00000462122 DZIP3Q86Y13 1208 aaKnown RBP15.05■□□□□ -0
TRAF3IP1-204ENST00000462122 SGIP1Q9BQI5 828 aa15.05■□□□□ -0
TRAF3IP1-204ENST00000462122 DBF4Q9UBU7 674 aaPredicted RBP15.05■□□□□ -0
TRAF3IP1-204ENST00000462122 SRP68Q9UHB9 627 aaKnown RBP15.05■□□□□ -0
TRAF3IP1-204ENST00000462122 COL24A1Q17RW2 1714 aa15.05■□□□□ -0
TRAF3IP1-204ENST00000462122 SLFN5Q08AF3 891 aa15.04■□□□□ -0
TRAF3IP1-204ENST00000462122 PDIA6Q15084 440 aa15.04■□□□□ -0
TRAF3IP1-204ENST00000462122 CCDC30Q5VVM6 783 aa15.04■□□□□ -0
TRAF3IP1-204ENST00000462122 TSPYL6Q8N831 410 aa15.04■□□□□ -0
TRAF3IP1-204ENST00000462122 NECTIN2Q92692 538 aa15.04■□□□□ -0
TRAF3IP1-204ENST00000462122 DDX21Q9NR30 783 aaKnown RBP eCLIP15.04■□□□□ -0
TRAF3IP1-204ENST00000462122 SCN7AQ01118 1682 aa15.03■□□□□ -0
TRAF3IP1-204ENST00000462122 EXOSC9Q06265 439 aaKnown RBP15.03■□□□□ -0
TRAF3IP1-204ENST00000462122 KIF6Q6ZMV9 814 aa15.03■□□□□ -0
TRAF3IP1-204ENST00000462122 LRP10Q7Z4F1 713 aa15.03■□□□□ -0
TRAF3IP1-204ENST00000462122 ARXQ96QS3 562 aa15.03■□□□□ -0
TRAF3IP1-204ENST00000462122 CHPF2Q9P2E5 772 aa15.03■□□□□ -0
TRAF3IP1-204ENST00000462122 TBC1D2BQ9UPU7 963 aa15.03■□□□□ -0
TRAF3IP1-204ENST00000462122 ZBED9Q6R2W3 1325 aa15.02■□□□□ -0
TRAF3IP1-204ENST00000462122 CAMTA2O94983 1202 aa15.02■□□□□ -0
TRAF3IP1-204ENST00000462122 PROSER3Q2NL68 480 aa15.02■□□□□ -0
TRAF3IP1-204ENST00000462122 HYPKQ9NX55 129 aa15.02■□□□□ -0
TRAF3IP1-204ENST00000462122 PPP1R1BQ9UD71 204 aaPredicted RBP15.02■□□□□ -0
TRAF3IP1-204ENST00000462122 ZNF652Q9Y2D9 606 aa15.02■□□□□ -0
TRAF3IP1-204ENST00000462122 ERVV-1B6SEH8 477 aa15.01□□□□□ -0.01
TRAF3IP1-204ENST00000462122 MMP10P09238 476 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms