RNA–Protein interactions for RNA: ENST00000461768.5

SRRM1-204, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-204ENST00000461768 MBIPQ9NS73 344 aa11.01□□□□□ -0.65
SRRM1-204ENST00000461768 PNPLA7Q6ZV29 1317 aa11.01□□□□□ -0.65
SRRM1-204ENST00000461768 ZNF521Q96K83 1311 aa11.01□□□□□ -0.65
SRRM1-204ENST00000461768 GNPATO15228 680 aa11□□□□□ -0.65
SRRM1-204ENST00000461768 GIGYF1O75420 1035 aaPredicted RBP11□□□□□ -0.65
SRRM1-204ENST00000461768 STARD3NLO95772 234 aa11□□□□□ -0.65
SRRM1-204ENST00000461768 INTS5Q6P9B9 1019 aaKnown RBP11□□□□□ -0.65
SRRM1-204ENST00000461768 CCDC87Q9NVE4 849 aa11□□□□□ -0.65
SRRM1-204ENST00000461768 RPS6KA4O75676 772 aa10.99□□□□□ -0.65
SRRM1-204ENST00000461768 SSFA2P28290 1259 aa10.99□□□□□ -0.65
SRRM1-204ENST00000461768 PDGFDQ9GZP0 370 aaPredicted RBP10.99□□□□□ -0.65
SRRM1-204ENST00000461768 USP16Q9Y5T5 823 aa10.99□□□□□ -0.65
SRRM1-204ENST00000461768 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.98□□□□□ -0.65
SRRM1-204ENST00000461768 ADRA2BP18089 450 aa10.98□□□□□ -0.65
SRRM1-204ENST00000461768 COL23A1Q86Y22 540 aaPredicted RBP10.98□□□□□ -0.65
SRRM1-204ENST00000461768 FLAD1Q8NFF5 587 aa10.98□□□□□ -0.65
SRRM1-204ENST00000461768 ZBTB1Q9Y2K1 713 aa10.98□□□□□ -0.65
SRRM1-204ENST00000461768 RTCBQ9Y3I0 505 aaKnown RBP10.98□□□□□ -0.65
SRRM1-204ENST00000461768 SOS1Q07889 1333 aaPredicted RBP10.98□□□□□ -0.65
SRRM1-204ENST00000461768 C4AP0C0L4 1744 aa10.98□□□□□ -0.65
SRRM1-204ENST00000461768 PHF14O94880 888 aa10.97□□□□□ -0.65
SRRM1-204ENST00000461768 A1BGP04217 495 aa10.97□□□□□ -0.65
SRRM1-204ENST00000461768 HOXB7P09629 217 aa10.97□□□□□ -0.65
SRRM1-204ENST00000461768 KRT24Q2M2I5 525 aa10.97□□□□□ -0.65
SRRM1-204ENST00000461768 SMIM5Q71RC9 77 aa10.97□□□□□ -0.65
SRRM1-204ENST00000461768 TSR2Q969E8 191 aaKnown RBP10.97□□□□□ -0.65
SRRM1-204ENST00000461768 SPINK5Q9NQ38 1064 aaPredicted RBP10.97□□□□□ -0.65
SRRM1-204ENST00000461768 FANCIQ9NVI1 1328 aa10.97□□□□□ -0.65
SRRM1-204ENST00000461768 CANXP27824 592 aaKnown RBP10.96□□□□□ -0.65
SRRM1-204ENST00000461768 EIF5P55010 431 aaKnown RBP10.96□□□□□ -0.65
SRRM1-204ENST00000461768 TRAPPC3LQ5T215 181 aa10.96□□□□□ -0.65
SRRM1-204ENST00000461768 COL24A1Q17RW2 1714 aa10.95□□□□□ -0.66
SRRM1-204ENST00000461768 COL15A1P39059 1388 aa10.95□□□□□ -0.66
SRRM1-204ENST00000461768 ERBB4Q15303 1308 aa10.95□□□□□ -0.66
SRRM1-204ENST00000461768 NBPF26B4DH59 902 aa10.95□□□□□ -0.66
SRRM1-204ENST00000461768 IL6STP40189 918 aaPredicted RBP10.95□□□□□ -0.66
SRRM1-204ENST00000461768 GOLGA2Q08379 1002 aa10.95□□□□□ -0.66
SRRM1-204ENST00000461768 DUSP27Q5VZP5 1158 aa10.95□□□□□ -0.66
SRRM1-204ENST00000461768 NBPF10Q6P3W6 841 aaKnown RBP10.95□□□□□ -0.66
SRRM1-204ENST00000461768 NBPF15Q8N660 670 aa10.95□□□□□ -0.66
SRRM1-204ENST00000461768 C8orf58Q8NAV2 365 aa10.95□□□□□ -0.66
SRRM1-204ENST00000461768 SLC16A10Q8TF71 515 aa10.95□□□□□ -0.66
SRRM1-204ENST00000461768 ARHGEF1Q92888 912 aaKnown RBP10.95□□□□□ -0.66
SRRM1-204ENST00000461768 ZBTB7AO95365 584 aa10.94□□□□□ -0.66
SRRM1-204ENST00000461768 PIP4K2AP48426 406 aaPredicted RBP10.94□□□□□ -0.66
SRRM1-204ENST00000461768 HNRNPUQ00839 825 aaKnown RBP eCLIP10.94□□□□□ -0.66
SRRM1-204ENST00000461768 MTFR1LQ9H019 292 aa10.94□□□□□ -0.66
SRRM1-204ENST00000461768 MYH16Q9H6N6 1097 aa10.94□□□□□ -0.66
SRRM1-204ENST00000461768 A0A087WZG4 1122 aa10.93□□□□□ -0.66
SRRM1-204ENST00000461768 E9PSI1 815 aa10.93□□□□□ -0.66
SRRM1-204ENST00000461768 EIF2S2P20042 333 aaKnown RBP10.93□□□□□ -0.66
SRRM1-204ENST00000461768 RFC4P35249 363 aa10.93□□□□□ -0.66
SRRM1-204ENST00000461768 SLFN5Q08AF3 891 aa10.93□□□□□ -0.66
SRRM1-204ENST00000461768 TSPYL6Q8N831 410 aa10.93□□□□□ -0.66
SRRM1-204ENST00000461768 LRP5O75197 1615 aa10.93□□□□□ -0.66
SRRM1-204ENST00000461768 SCN7AQ01118 1682 aa10.92□□□□□ -0.66
SRRM1-204ENST00000461768 USP42Q9H9J4 1324 aaKnown RBP10.92□□□□□ -0.66
SRRM1-204ENST00000461768 ELL2O00472 640 aaPredicted RBP10.92□□□□□ -0.66
SRRM1-204ENST00000461768 EXOSC9Q06265 439 aaKnown RBP10.92□□□□□ -0.66
SRRM1-204ENST00000461768 PDIA6Q15084 440 aa10.92□□□□□ -0.66
SRRM1-204ENST00000461768 HDGFL1Q5TGJ6 251 aa10.92□□□□□ -0.66
SRRM1-204ENST00000461768 TRMT2AQ8IZ69 625 aaKnown RBP10.92□□□□□ -0.66
SRRM1-204ENST00000461768 CDCA7LQ96GN5 454 aa10.92□□□□□ -0.66
SRRM1-204ENST00000461768 SPON1Q9HCB6 807 aa10.92□□□□□ -0.66
SRRM1-204ENST00000461768 NARFQ9UHQ1 456 aa10.92□□□□□ -0.66
SRRM1-204ENST00000461768 ATF5Q9Y2D1 282 aaPredicted RBP10.92□□□□□ -0.66
SRRM1-204ENST00000461768 ZBED9Q6R2W3 1325 aa10.91□□□□□ -0.66
SRRM1-204ENST00000461768 BCORQ6W2J9 1755 aa10.91□□□□□ -0.66
SRRM1-204ENST00000461768 GYS1P13807 737 aa10.91□□□□□ -0.66
SRRM1-204ENST00000461768 PTGER2P43116 358 aa10.91□□□□□ -0.66
SRRM1-204ENST00000461768 PROSER3Q2NL68 480 aa10.91□□□□□ -0.66
SRRM1-204ENST00000461768 TWISTNBQ3B726 338 aaPredicted RBP10.91□□□□□ -0.66
SRRM1-204ENST00000461768 LRP10Q7Z4F1 713 aa10.91□□□□□ -0.66
SRRM1-204ENST00000461768 NECTIN2Q92692 538 aa10.91□□□□□ -0.66
SRRM1-204ENST00000461768 SGIP1Q9BQI5 828 aa10.91□□□□□ -0.66
SRRM1-204ENST00000461768 CHPF2Q9P2E5 772 aa10.91□□□□□ -0.66
SRRM1-204ENST00000461768 SRP68Q9UHB9 627 aaKnown RBP10.91□□□□□ -0.66
SRRM1-204ENST00000461768 ZNF330Q9Y3S2 320 aaPredicted RBP10.91□□□□□ -0.66
SRRM1-204ENST00000461768 ZPR1O75312 459 aa10.9□□□□□ -0.66
SRRM1-204ENST00000461768 MYL6BP14649 208 aa10.9□□□□□ -0.66
SRRM1-204ENST00000461768 USPL1Q5W0Q7 1092 aa10.9□□□□□ -0.66
SRRM1-204ENST00000461768 MSL1Q68DK7 614 aa10.9□□□□□ -0.66
SRRM1-204ENST00000461768 NPM2Q86SE8 214 aaKnown RBP10.9□□□□□ -0.66
SRRM1-204ENST00000461768 DZIP3Q86Y13 1208 aaKnown RBP10.9□□□□□ -0.66
SRRM1-204ENST00000461768 CHMP4AQ9BY43 222 aa10.9□□□□□ -0.66
SRRM1-204ENST00000461768 BCL2L12Q9HB09 334 aa10.9□□□□□ -0.66
SRRM1-204ENST00000461768 DDX21Q9NR30 783 aaKnown RBP eCLIP10.9□□□□□ -0.66
SRRM1-204ENST00000461768 DBF4Q9UBU7 674 aaPredicted RBP10.9□□□□□ -0.66
SRRM1-204ENST00000461768 TBC1D2BQ9UPU7 963 aa10.9□□□□□ -0.66
SRRM1-204ENST00000461768 SRCAPQ6ZRS2 3230 aa10.9□□□□□ -0.67
SRRM1-204ENST00000461768 RGL2O15211 777 aa10.89□□□□□ -0.67
SRRM1-204ENST00000461768 VAMP4O75379 141 aa10.89□□□□□ -0.67
SRRM1-204ENST00000461768 CAMTA2O94983 1202 aa10.89□□□□□ -0.67
SRRM1-204ENST00000461768 ANXA1P04083 346 aa10.89□□□□□ -0.67
SRRM1-204ENST00000461768 FKBP8Q14318 412 aa10.89□□□□□ -0.67
SRRM1-204ENST00000461768 CCDC30Q5VVM6 783 aa10.89□□□□□ -0.67
SRRM1-204ENST00000461768 NLGN1Q8N2Q7 840 aa10.89□□□□□ -0.67
SRRM1-204ENST00000461768 POLD1P28340 1107 aa10.88□□□□□ -0.67
SRRM1-204ENST00000461768 TTLL7Q6ZT98 887 aa10.88□□□□□ -0.67
SRRM1-204ENST00000461768 ARXQ96QS3 562 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms