RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 AMIGO3Q86WK7 504 aa24.06■■□□□ 1.44
DDR1-241ENST00000460944 INTS5Q6P9B9 1019 aaKnown RBP24.05■■□□□ 1.44
DDR1-241ENST00000460944 SMIM5Q71RC9 77 aa24.04■■□□□ 1.44
DDR1-241ENST00000460944 PPP1R1BQ9UD71 204 aaPredicted RBP24.04■■□□□ 1.44
DDR1-241ENST00000460944 LAS1LQ9Y4W2 734 aaKnown RBP24.04■■□□□ 1.44
DDR1-241ENST00000460944 ZBTB1Q9Y2K1 713 aa24.03■■□□□ 1.44
DDR1-241ENST00000460944 LAMB4A4D0S4 1761 aa24.03■■□□□ 1.44
DDR1-241ENST00000460944 SRCAPQ6ZRS2 3230 aa24.02■■□□□ 1.44
DDR1-241ENST00000460944 POLD1P28340 1107 aa24.02■■□□□ 1.44
DDR1-241ENST00000460944 RFC4P35249 363 aa24.02■■□□□ 1.44
DDR1-241ENST00000460944 EIF4A1P60842 406 aaKnown RBP24.02■■□□□ 1.44
DDR1-241ENST00000460944 C4AP0C0L4 1744 aa24.01■■□□□ 1.43
DDR1-241ENST00000460944 CANXP27824 592 aaKnown RBP24.01■■□□□ 1.43
DDR1-241ENST00000460944 ARHGEF1Q92888 912 aaKnown RBP24.01■■□□□ 1.43
DDR1-241ENST00000460944 COL24A1Q17RW2 1714 aa24.01■■□□□ 1.43
DDR1-241ENST00000460944 CCDC27Q2M243 656 aa24■■□□□ 1.43
DDR1-241ENST00000460944 NCBP3Q53F19 620 aaKnown RBP24■■□□□ 1.43
DDR1-241ENST00000460944 SOS1Q07889 1333 aaPredicted RBP24■■□□□ 1.43
DDR1-241ENST00000460944 SENP3-EIF4A1A0A087X0R7 540 aa23.99■■□□□ 1.43
DDR1-241ENST00000460944 CHL1O00533 1208 aa23.99■■□□□ 1.43
DDR1-241ENST00000460944 PTGER2P43116 358 aa23.99■■□□□ 1.43
DDR1-241ENST00000460944 MSL1Q68DK7 614 aa23.99■■□□□ 1.43
DDR1-241ENST00000460944 NPM2Q86SE8 214 aaKnown RBP23.99■■□□□ 1.43
DDR1-241ENST00000460944 CFAP44Q96MT7 982 aa23.99■■□□□ 1.43
DDR1-241ENST00000460944 USP16Q9Y5T5 823 aa23.99■■□□□ 1.43
DDR1-241ENST00000460944 PRAMEF22A3QJZ6 481 aa23.98■■□□□ 1.43
DDR1-241ENST00000460944 IFT57Q9NWB7 429 aa23.98■■□□□ 1.43
DDR1-241ENST00000460944 COL15A1P39059 1388 aa23.98■■□□□ 1.43
DDR1-241ENST00000460944 GIGYF1O75420 1035 aaPredicted RBP23.97■■□□□ 1.43
DDR1-241ENST00000460944 GNAI1P63096 354 aa23.97■■□□□ 1.43
DDR1-241ENST00000460944 A1BGP04217 495 aa23.96■■□□□ 1.43
DDR1-241ENST00000460944 IL6STP40189 918 aaPredicted RBP23.96■■□□□ 1.43
DDR1-241ENST00000460944 MIER1Q8N108 512 aa23.96■■□□□ 1.43
DDR1-241ENST00000460944 SGIP1Q9BQI5 828 aa23.96■■□□□ 1.43
DDR1-241ENST00000460944 ZNF330Q9Y3S2 320 aaPredicted RBP23.96■■□□□ 1.43
DDR1-241ENST00000460944 A0A087WZG4 1122 aa23.95■■□□□ 1.42
DDR1-241ENST00000460944 ZPR1O75312 459 aa23.95■■□□□ 1.42
DDR1-241ENST00000460944 WWC1Q8IX03 1113 aa23.95■■□□□ 1.42
DDR1-241ENST00000460944 NGEFQ8N5V2 710 aa23.95■■□□□ 1.42
DDR1-241ENST00000460944 SALL2Q9Y467 1007 aaPredicted RBP23.95■■□□□ 1.42
DDR1-241ENST00000460944 USP42Q9H9J4 1324 aaKnown RBP23.94■■□□□ 1.42
DDR1-241ENST00000460944 EIF5P55010 431 aaKnown RBP23.94■■□□□ 1.42
DDR1-241ENST00000460944 ARXQ96QS3 562 aa23.94■■□□□ 1.42
DDR1-241ENST00000460944 ZNF853P0CG23 659 aa23.93■■□□□ 1.42
DDR1-241ENST00000460944 NLGN1Q8N2Q7 840 aa23.93■■□□□ 1.42
DDR1-241ENST00000460944 MBIPQ9NS73 344 aa23.93■■□□□ 1.42
DDR1-241ENST00000460944 GYS1P13807 737 aa23.92■■□□□ 1.42
DDR1-241ENST00000460944 SRP68Q9UHB9 627 aaKnown RBP23.92■■□□□ 1.42
DDR1-241ENST00000460944 NARFQ9UHQ1 456 aa23.91■■□□□ 1.42
DDR1-241ENST00000460944 PIP4K2AP48426 406 aaPredicted RBP23.9■■□□□ 1.42
DDR1-241ENST00000460944 USPL1Q5W0Q7 1092 aa23.9■■□□□ 1.42
DDR1-241ENST00000460944 IL16Q14005 1332 aa23.89■■□□□ 1.42
DDR1-241ENST00000460944 ERBB4Q15303 1308 aa23.88■■□□□ 1.41
DDR1-241ENST00000460944 EIF2S2P20042 333 aaKnown RBP23.88■■□□□ 1.41
DDR1-241ENST00000460944 WDR63Q8IWG1 891 aa23.88■■□□□ 1.41
DDR1-241ENST00000460944 SCN7AQ01118 1682 aa23.87■■□□□ 1.41
DDR1-241ENST00000460944 NBPF26B4DH59 902 aa23.87■■□□□ 1.41
DDR1-241ENST00000460944 MMP10P09238 476 aa23.87■■□□□ 1.41
DDR1-241ENST00000460944 HOXB7P09629 217 aa23.87■■□□□ 1.41
DDR1-241ENST00000460944 KRT24Q2M2I5 525 aa23.87■■□□□ 1.41
DDR1-241ENST00000460944 NBPF10Q6P3W6 841 aaKnown RBP23.87■■□□□ 1.41
DDR1-241ENST00000460944 KLHL34Q8N239 644 aa23.87■■□□□ 1.41
DDR1-241ENST00000460944 NBPF15Q8N660 670 aa23.87■■□□□ 1.41
DDR1-241ENST00000460944 DZIP3Q86Y13 1208 aaKnown RBP23.86■■□□□ 1.41
DDR1-241ENST00000460944 TBC1D2BQ9UPU7 963 aa23.86■■□□□ 1.41
DDR1-241ENST00000460944 FKBP8Q14318 412 aa23.85■■□□□ 1.41
DDR1-241ENST00000460944 FHDC1Q9C0D6 1143 aaPredicted RBP23.85■■□□□ 1.41
DDR1-241ENST00000460944 BCORQ6W2J9 1755 aa23.84■■□□□ 1.41
DDR1-241ENST00000460944 MYL6BP14649 208 aa23.84■■□□□ 1.41
DDR1-241ENST00000460944 DUSP27Q5VZP5 1158 aa23.84■■□□□ 1.41
DDR1-241ENST00000460944 HDGFL1Q5TGJ6 251 aa23.83■■□□□ 1.41
DDR1-241ENST00000460944 TSR2Q969E8 191 aaKnown RBP23.83■■□□□ 1.41
DDR1-241ENST00000460944 PARP3Q9Y6F1 533 aa23.83■■□□□ 1.41
DDR1-241ENST00000460944 NECTIN2Q92692 538 aa23.82■■□□□ 1.4
DDR1-241ENST00000460944 CAMTA2O94983 1202 aa23.81■■□□□ 1.4
DDR1-241ENST00000460944 ZNF652Q9Y2D9 606 aa23.81■■□□□ 1.4
DDR1-241ENST00000460944 KIF6Q6ZMV9 814 aa23.8■■□□□ 1.4
DDR1-241ENST00000460944 SYT17Q9BSW7 474 aa23.8■■□□□ 1.4
DDR1-241ENST00000460944 CHMP4AQ9BY43 222 aa23.8■■□□□ 1.4
DDR1-241ENST00000460944 MYH16Q9H6N6 1097 aa23.8■■□□□ 1.4
DDR1-241ENST00000460944 BCL2L12Q9HB09 334 aa23.8■■□□□ 1.4
DDR1-241ENST00000460944 ELL2O00472 640 aaPredicted RBP23.79■■□□□ 1.4
DDR1-241ENST00000460944 FANCIQ9NVI1 1328 aa23.79■■□□□ 1.4
DDR1-241ENST00000460944 NFIXQ14938 502 aa23.78■■□□□ 1.4
DDR1-241ENST00000460944 DDX21Q9NR30 783 aaKnown RBP eCLIP23.78■■□□□ 1.4
DDR1-241ENST00000460944 TM4SF1P30408 202 aa23.77■■□□□ 1.4
DDR1-241ENST00000460944 DDR1Q08345 913 aa23.77■■□□□ 1.4
DDR1-241ENST00000460944 GOLGA2Q08379 1002 aa23.77■■□□□ 1.4
DDR1-241ENST00000460944 PDIA6Q15084 440 aa23.77■■□□□ 1.4
DDR1-241ENST00000460944 BICDL1Q6ZP65 573 aa23.77■■□□□ 1.4
DDR1-241ENST00000460944 C8orf58Q8NAV2 365 aa23.77■■□□□ 1.4
DDR1-241ENST00000460944 DBF4Q9UBU7 674 aaPredicted RBP23.77■■□□□ 1.4
DDR1-241ENST00000460944 CD2APQ9Y5K6 639 aa23.77■■□□□ 1.4
DDR1-241ENST00000460944 ZNF521Q96K83 1311 aa23.77■■□□□ 1.4
DDR1-241ENST00000460944 POLRMTO00411 1230 aaKnown RBP23.76■■□□□ 1.39
DDR1-241ENST00000460944 RGL2O15211 777 aa23.76■■□□□ 1.39
DDR1-241ENST00000460944 CLEC4GQ6UXB4 293 aa23.76■■□□□ 1.39
DDR1-241ENST00000460944 CHPF2Q9P2E5 772 aa23.76■■□□□ 1.39
DDR1-241ENST00000460944 ANXA1P04083 346 aa23.75■■□□□ 1.39
DDR1-241ENST00000460944 PROSER3Q2NL68 480 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms