RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 CFAP44Q96MT7 982 aa14.44□□□□□ -0.1
APTX-209ENST00000460940 IFT57Q9NWB7 429 aa14.44□□□□□ -0.1
APTX-209ENST00000460940 EIF4A1P60842 406 aaKnown RBP14.43□□□□□ -0.1
APTX-209ENST00000460940 WWC1Q8IX03 1113 aa14.43□□□□□ -0.1
APTX-209ENST00000460940 SLC16A10Q8TF71 515 aa14.43□□□□□ -0.1
APTX-209ENST00000460940 CCDC87Q9NVE4 849 aa14.43□□□□□ -0.1
APTX-209ENST00000460940 RTCBQ9Y3I0 505 aaKnown RBP14.43□□□□□ -0.1
APTX-209ENST00000460940 GNAI1P63096 354 aa14.42□□□□□ -0.1
APTX-209ENST00000460940 IL16Q14005 1332 aa14.42□□□□□ -0.1
APTX-209ENST00000460940 LAMB4A4D0S4 1761 aa14.42□□□□□ -0.1
APTX-209ENST00000460940 LRP5O75197 1615 aa14.42□□□□□ -0.1
APTX-209ENST00000460940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.42□□□□□ -0.1
APTX-209ENST00000460940 RPS6KA4O75676 772 aa14.42□□□□□ -0.1
APTX-209ENST00000460940 ZNF853P0CG23 659 aa14.42□□□□□ -0.1
APTX-209ENST00000460940 INTS5Q6P9B9 1019 aaKnown RBP14.42□□□□□ -0.1
APTX-209ENST00000460940 MTFR1LQ9H019 292 aa14.41□□□□□ -0.1
APTX-209ENST00000460940 MYH14Q7Z406 1995 aaKnown RBP14.41□□□□□ -0.1
APTX-209ENST00000460940 GIGYF1O75420 1035 aaPredicted RBP14.4□□□□□ -0.1
APTX-209ENST00000460940 COL23A1Q86Y22 540 aaPredicted RBP14.4□□□□□ -0.1
APTX-209ENST00000460940 WDR63Q8IWG1 891 aa14.4□□□□□ -0.1
APTX-209ENST00000460940 LAS1LQ9Y4W2 734 aaKnown RBP14.4□□□□□ -0.1
APTX-209ENST00000460940 PHF14O94880 888 aa14.4□□□□□ -0.1
APTX-209ENST00000460940 TRAPPC3LQ5T215 181 aa14.4□□□□□ -0.1
APTX-209ENST00000460940 AMIGO3Q86WK7 504 aa14.4□□□□□ -0.1
APTX-209ENST00000460940 PDGFDQ9GZP0 370 aaPredicted RBP14.4□□□□□ -0.1
APTX-209ENST00000460940 SOS1Q07889 1333 aaPredicted RBP14.4□□□□□ -0.1
APTX-209ENST00000460940 SPON1Q9HCB6 807 aa14.39□□□□□ -0.11
APTX-209ENST00000460940 MBIPQ9NS73 344 aa14.39□□□□□ -0.11
APTX-209ENST00000460940 ZBTB1Q9Y2K1 713 aa14.39□□□□□ -0.11
APTX-209ENST00000460940 MSH5O43196 834 aa14.38□□□□□ -0.11
APTX-209ENST00000460940 HOXB7P09629 217 aa14.38□□□□□ -0.11
APTX-209ENST00000460940 COL15A1P39059 1388 aa14.38□□□□□ -0.11
APTX-209ENST00000460940 ERBB4Q15303 1308 aa14.38□□□□□ -0.11
APTX-209ENST00000460940 ZBTB7AO95365 584 aa14.38□□□□□ -0.11
APTX-209ENST00000460940 USP16Q9Y5T5 823 aa14.38□□□□□ -0.11
APTX-209ENST00000460940 C4AP0C0L4 1744 aa14.37□□□□□ -0.11
APTX-209ENST00000460940 A0A087WZG4 1122 aa14.37□□□□□ -0.11
APTX-209ENST00000460940 PRAMEF22A3QJZ6 481 aa14.37□□□□□ -0.11
APTX-209ENST00000460940 IL6STP40189 918 aaPredicted RBP14.37□□□□□ -0.11
APTX-209ENST00000460940 COL24A1Q17RW2 1714 aa14.36□□□□□ -0.11
APTX-209ENST00000460940 ZNF521Q96K83 1311 aa14.36□□□□□ -0.11
APTX-209ENST00000460940 SENP3-EIF4A1A0A087X0R7 540 aa14.36□□□□□ -0.11
APTX-209ENST00000460940 CANXP27824 592 aaKnown RBP14.36□□□□□ -0.11
APTX-209ENST00000460940 RFC4P35249 363 aa14.36□□□□□ -0.11
APTX-209ENST00000460940 ARHGEF1Q92888 912 aaKnown RBP14.36□□□□□ -0.11
APTX-209ENST00000460940 SALL2Q9Y467 1007 aaPredicted RBP14.36□□□□□ -0.11
APTX-209ENST00000460940 EIF5P55010 431 aaKnown RBP14.35□□□□□ -0.11
APTX-209ENST00000460940 USP42Q9H9J4 1324 aaKnown RBP14.35□□□□□ -0.11
APTX-209ENST00000460940 A1BGP04217 495 aa14.35□□□□□ -0.11
APTX-209ENST00000460940 NPM2Q86SE8 214 aaKnown RBP14.35□□□□□ -0.11
APTX-209ENST00000460940 SMIM5Q71RC9 77 aa14.34□□□□□ -0.11
APTX-209ENST00000460940 POLD1P28340 1107 aa14.33□□□□□ -0.11
APTX-209ENST00000460940 CHMP4AQ9BY43 222 aa14.33□□□□□ -0.11
APTX-209ENST00000460940 MYH16Q9H6N6 1097 aa14.33□□□□□ -0.11
APTX-209ENST00000460940 ZPR1O75312 459 aa14.33□□□□□ -0.12
APTX-209ENST00000460940 PTGER2P43116 358 aa14.33□□□□□ -0.12
APTX-209ENST00000460940 SGIP1Q9BQI5 828 aa14.33□□□□□ -0.12
APTX-209ENST00000460940 NARFQ9UHQ1 456 aa14.33□□□□□ -0.12
APTX-209ENST00000460940 ATF5Q9Y2D1 282 aaPredicted RBP14.33□□□□□ -0.12
APTX-209ENST00000460940 FANCIQ9NVI1 1328 aa14.32□□□□□ -0.12
APTX-209ENST00000460940 SCN7AQ01118 1682 aa14.32□□□□□ -0.12
APTX-209ENST00000460940 NBPF26B4DH59 902 aa14.32□□□□□ -0.12
APTX-209ENST00000460940 KRT24Q2M2I5 525 aa14.32□□□□□ -0.12
APTX-209ENST00000460940 DUSP27Q5VZP5 1158 aa14.32□□□□□ -0.12
APTX-209ENST00000460940 NBPF10Q6P3W6 841 aaKnown RBP14.32□□□□□ -0.12
APTX-209ENST00000460940 NLGN1Q8N2Q7 840 aa14.32□□□□□ -0.12
APTX-209ENST00000460940 NBPF15Q8N660 670 aa14.32□□□□□ -0.12
APTX-209ENST00000460940 TSR2Q969E8 191 aaKnown RBP14.32□□□□□ -0.12
APTX-209ENST00000460940 RGL2O15211 777 aa14.31□□□□□ -0.12
APTX-209ENST00000460940 GYS1P13807 737 aa14.31□□□□□ -0.12
APTX-209ENST00000460940 GOLGA2Q08379 1002 aa14.31□□□□□ -0.12
APTX-209ENST00000460940 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
APTX-209ENST00000460940 MSL1Q68DK7 614 aa14.31□□□□□ -0.12
APTX-209ENST00000460940 ZNF330Q9Y3S2 320 aaPredicted RBP14.31□□□□□ -0.12
APTX-209ENST00000460940 EIF2S2P20042 333 aaKnown RBP14.3□□□□□ -0.12
APTX-209ENST00000460940 SRP68Q9UHB9 627 aaKnown RBP14.3□□□□□ -0.12
APTX-209ENST00000460940 E9PSI1 815 aa14.29□□□□□ -0.12
APTX-209ENST00000460940 PIP4K2AP48426 406 aaPredicted RBP14.29□□□□□ -0.12
APTX-209ENST00000460940 DZIP3Q86Y13 1208 aaKnown RBP14.29□□□□□ -0.12
APTX-209ENST00000460940 PPP1R1BQ9UD71 204 aaPredicted RBP14.29□□□□□ -0.12
APTX-209ENST00000460940 BCORQ6W2J9 1755 aa14.29□□□□□ -0.12
APTX-209ENST00000460940 USPL1Q5W0Q7 1092 aa14.29□□□□□ -0.12
APTX-209ENST00000460940 C8orf58Q8NAV2 365 aa14.29□□□□□ -0.12
APTX-209ENST00000460940 ARXQ96QS3 562 aa14.29□□□□□ -0.12
APTX-209ENST00000460940 DDX21Q9NR30 783 aaKnown RBP eCLIP14.29□□□□□ -0.12
APTX-209ENST00000460940 SRCAPQ6ZRS2 3230 aa14.28□□□□□ -0.12
APTX-209ENST00000460940 CAMTA2O94983 1202 aa14.28□□□□□ -0.12
APTX-209ENST00000460940 PDIA6Q15084 440 aa14.28□□□□□ -0.12
APTX-209ENST00000460940 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
APTX-209ENST00000460940 DBF4Q9UBU7 674 aaPredicted RBP14.28□□□□□ -0.12
APTX-209ENST00000460940 MYL6BP14649 208 aa14.27□□□□□ -0.12
APTX-209ENST00000460940 FKBP8Q14318 412 aa14.27□□□□□ -0.12
APTX-209ENST00000460940 TWISTNBQ3B726 338 aaPredicted RBP14.27□□□□□ -0.12
APTX-209ENST00000460940 KIF6Q6ZMV9 814 aa14.27□□□□□ -0.12
APTX-209ENST00000460940 TBC1D2BQ9UPU7 963 aa14.27□□□□□ -0.12
APTX-209ENST00000460940 ZNF652Q9Y2D9 606 aa14.27□□□□□ -0.12
APTX-209ENST00000460940 MMP10P09238 476 aa14.27□□□□□ -0.13
APTX-209ENST00000460940 CCDC30Q5VVM6 783 aa14.27□□□□□ -0.13
APTX-209ENST00000460940 CLEC4GQ6UXB4 293 aa14.27□□□□□ -0.13
APTX-209ENST00000460940 LRP10Q7Z4F1 713 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms