RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 POU4F2Q12837 409 aa8.59□□□□□ -1.03
VBP1-202ENST00000460509 LCE2AQ5TA79 106 aaPredicted RBP8.59□□□□□ -1.03
VBP1-202ENST00000460509 PHLDB3Q6NSJ2 640 aa8.59□□□□□ -1.03
VBP1-202ENST00000460509 TREML4Q6UXN2 200 aa8.59□□□□□ -1.03
VBP1-202ENST00000460509 LYSMD3Q7Z3D4 306 aa8.59□□□□□ -1.03
VBP1-202ENST00000460509 RNF217Q8TC41 542 aa8.59□□□□□ -1.03
VBP1-202ENST00000460509 RHBDD1Q8TEB9 315 aa8.59□□□□□ -1.03
VBP1-202ENST00000460509 AIDAQ96BJ3 306 aa8.59□□□□□ -1.03
VBP1-202ENST00000460509 NGLY1Q96IV0 654 aa8.59□□□□□ -1.03
VBP1-202ENST00000460509 IQSEC3Q9UPP2 1182 aaPredicted RBP8.59□□□□□ -1.03
VBP1-202ENST00000460509 SERTM1A2A2V5 107 aa8.58□□□□□ -1.04
VBP1-202ENST00000460509 MAN1A2O60476 641 aa8.58□□□□□ -1.04
VBP1-202ENST00000460509 PLA2G4AP47712 749 aa8.58□□□□□ -1.04
VBP1-202ENST00000460509 TRIM26Q12899 539 aaPredicted RBP8.58□□□□□ -1.04
VBP1-202ENST00000460509 NAA30Q147X3 362 aaPredicted RBP8.58□□□□□ -1.04
VBP1-202ENST00000460509 HCN4Q9Y3Q4 1203 aa8.58□□□□□ -1.04
VBP1-202ENST00000460509 SOS2Q07890 1332 aaPredicted RBP8.57□□□□□ -1.04
VBP1-202ENST00000460509 FOXO3O43524 673 aa8.57□□□□□ -1.04
VBP1-202ENST00000460509 NOS2P35228 1153 aa8.57□□□□□ -1.04
VBP1-202ENST00000460509 KCNA1Q09470 495 aa8.57□□□□□ -1.04
VBP1-202ENST00000460509 C4orf17Q53FE4 359 aa8.57□□□□□ -1.04
VBP1-202ENST00000460509 TAS1R3Q7RTX0 852 aa8.57□□□□□ -1.04
VBP1-202ENST00000460509 L3MBTL2Q969R5 705 aa8.57□□□□□ -1.04
VBP1-202ENST00000460509 SOBPA7XYQ1 873 aa8.56□□□□□ -1.04
VBP1-202ENST00000460509 ABL1P00519 1130 aa8.56□□□□□ -1.04
VBP1-202ENST00000460509 SNRPBP14678 240 aaKnown RBP8.56□□□□□ -1.04
VBP1-202ENST00000460509 ARID4AP29374 1257 aaPredicted RBP8.56□□□□□ -1.04
VBP1-202ENST00000460509 SH3PXD2AQ5TCZ1 1133 aa8.56□□□□□ -1.04
VBP1-202ENST00000460509 CAPN12Q6ZSI9 719 aa8.56□□□□□ -1.04
VBP1-202ENST00000460509 CCER1Q8TC90 406 aaPredicted RBP8.56□□□□□ -1.04
VBP1-202ENST00000460509 C2orf49Q9BVC5 232 aaPredicted RBP8.56□□□□□ -1.04
VBP1-202ENST00000460509 MTMR7Q9Y216 660 aa8.56□□□□□ -1.04
VBP1-202ENST00000460509 IVNS1ABPQ9Y6Y0 642 aa8.56□□□□□ -1.04
VBP1-202ENST00000460509 PATL2C9JE40 543 aaKnown RBP8.55□□□□□ -1.04
VBP1-202ENST00000460509 TEAD4Q15561 434 aa8.55□□□□□ -1.04
VBP1-202ENST00000460509 NBPF10Q6P3W6 841 aaKnown RBP8.55□□□□□ -1.04
VBP1-202ENST00000460509 ZDHHC1Q8WTX9 485 aa8.55□□□□□ -1.04
VBP1-202ENST00000460509 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.55□□□□□ -1.04
VBP1-202ENST00000460509 SEPT3Q9UH03 358 aa8.55□□□□□ -1.04
VBP1-202ENST00000460509 DNMT3LQ9UJW3 386 aa8.55□□□□□ -1.04
VBP1-202ENST00000460509 PTCD1O75127 700 aaKnown RBP8.54□□□□□ -1.04
VBP1-202ENST00000460509 C1orf216Q8TAB5 229 aa8.54□□□□□ -1.04
VBP1-202ENST00000460509 SENP2Q9HC62 589 aa8.54□□□□□ -1.04
VBP1-202ENST00000460509 TIMMDC1Q9NPL8 285 aa8.54□□□□□ -1.04
VBP1-202ENST00000460509 SPATA31C2B4DYI2 1134 aa8.53□□□□□ -1.04
VBP1-202ENST00000460509 EML1O00423 815 aa8.53□□□□□ -1.04
VBP1-202ENST00000460509 SERPINB4P48594 390 aa8.53□□□□□ -1.04
VBP1-202ENST00000460509 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.53□□□□□ -1.04
VBP1-202ENST00000460509 ANO2Q9NQ90 1003 aa8.53□□□□□ -1.04
VBP1-202ENST00000460509 WFS1O76024 890 aa8.52□□□□□ -1.05
VBP1-202ENST00000460509 TXLNAP40222 546 aa8.52□□□□□ -1.05
VBP1-202ENST00000460509 NBPF1Q3BBV0 1214 aa8.52□□□□□ -1.05
VBP1-202ENST00000460509 ALDH16A1Q8IZ83 802 aa8.52□□□□□ -1.05
VBP1-202ENST00000460509 STAG2Q8N3U4 1231 aa8.52□□□□□ -1.05
VBP1-202ENST00000460509 GTF3C2Q8WUA4 911 aaPredicted RBP8.52□□□□□ -1.05
VBP1-202ENST00000460509 KIFC2Q96AC6 838 aa8.52□□□□□ -1.05
VBP1-202ENST00000460509 GAS2L1Q99501 681 aaPredicted RBP8.52□□□□□ -1.05
VBP1-202ENST00000460509 GZF1Q9H116 711 aaPredicted RBP8.52□□□□□ -1.05
VBP1-202ENST00000460509 NFX1Q12986 1120 aaKnown RBP8.51□□□□□ -1.05
VBP1-202ENST00000460509 ZNF211Q13398 564 aaPredicted RBP8.51□□□□□ -1.05
VBP1-202ENST00000460509 BICDL1Q6ZP65 573 aa8.51□□□□□ -1.05
VBP1-202ENST00000460509 TXNDC2Q86VQ3 553 aa8.51□□□□□ -1.05
VBP1-202ENST00000460509 ZNF295-AS1Q8N0V1 137 aa8.51□□□□□ -1.05
VBP1-202ENST00000460509 TRIM47Q96LD4 638 aa8.51□□□□□ -1.05
VBP1-202ENST00000460509 PHACTR1Q9C0D0 580 aa8.51□□□□□ -1.05
VBP1-202ENST00000460509 TATP17735 454 aaPredicted RBP8.5□□□□□ -1.05
VBP1-202ENST00000460509 SAP130Q9H0E3 1048 aa8.5□□□□□ -1.05
VBP1-202ENST00000460509 GPAMQ9HCL2 828 aa8.5□□□□□ -1.05
VBP1-202ENST00000460509 MTMR3Q13615 1198 aa8.49□□□□□ -1.05
VBP1-202ENST00000460509 ARSJQ5FYB0 599 aaPredicted RBP8.49□□□□□ -1.05
VBP1-202ENST00000460509 C16orf46Q6P387 395 aa8.49□□□□□ -1.05
VBP1-202ENST00000460509 RHPN1Q8TCX5 695 aa8.49□□□□□ -1.05
VBP1-202ENST00000460509 COL26A1Q96A83 441 aa8.49□□□□□ -1.05
VBP1-202ENST00000460509 NEUROD4Q9HD90 331 aa8.49□□□□□ -1.05
VBP1-202ENST00000460509 A0A1B0GTH6 734 aa8.48□□□□□ -1.05
VBP1-202ENST00000460509 WDR44Q5JSH3 913 aa8.48□□□□□ -1.05
VBP1-202ENST00000460509 COX20Q5RI15 118 aa8.48□□□□□ -1.05
VBP1-202ENST00000460509 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
VBP1-202ENST00000460509 QTRT2Q9H974 415 aaKnown RBP8.48□□□□□ -1.05
VBP1-202ENST00000460509 GNEQ9Y223 722 aaKnown RBP8.48□□□□□ -1.05
VBP1-202ENST00000460509 DNMT3AQ9Y6K1 912 aaPredicted RBP8.48□□□□□ -1.05
VBP1-202ENST00000460509 MSX1P28360 303 aa8.47□□□□□ -1.05
VBP1-202ENST00000460509 HIRAP54198 1017 aaPredicted RBP8.47□□□□□ -1.05
VBP1-202ENST00000460509 PTSQ03393 145 aa8.47□□□□□ -1.05
VBP1-202ENST00000460509 DGKZQ13574 1117 aa8.47□□□□□ -1.05
VBP1-202ENST00000460509 RIPOR1Q6ZS17 1223 aa8.47□□□□□ -1.05
VBP1-202ENST00000460509 KLK14Q9P0G3 267 aa8.47□□□□□ -1.05
VBP1-202ENST00000460509 BIN2Q9UBW5 565 aaPredicted RBP8.47□□□□□ -1.05
VBP1-202ENST00000460509 H3BRB1 525 aa8.46□□□□□ -1.06
VBP1-202ENST00000460509 RTN1Q16799 776 aa8.46□□□□□ -1.06
VBP1-202ENST00000460509 GLYCTKQ8IVS8 523 aa8.46□□□□□ -1.06
VBP1-202ENST00000460509 PGBD3Q8N328 593 aa8.46□□□□□ -1.06
VBP1-202ENST00000460509 TUT1Q9H6E5 874 aaKnown RBP8.46□□□□□ -1.06
VBP1-202ENST00000460509 RUBCNLQ9H714 662 aa8.46□□□□□ -1.06
VBP1-202ENST00000460509 ZDHHC3Q9NYG2 299 aa8.46□□□□□ -1.06
VBP1-202ENST00000460509 LRFN2Q9ULH4 789 aa8.46□□□□□ -1.06
VBP1-202ENST00000460509 GJA3Q9Y6H8 435 aa8.46□□□□□ -1.06
VBP1-202ENST00000460509 FKBP4Q02790 459 aaKnown RBP eCLIP8.45□□□□□ -1.06
VBP1-202ENST00000460509 AAMPQ13685 434 aa8.45□□□□□ -1.06
VBP1-202ENST00000460509 C1orf53Q5VUE5 145 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms