RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	WWC1	Q8IX03	1113 aa		13.46	□□□□□ -0.25
MRPL55-223	ENST00000459783	TSPYL4	Q9UJ04	414 aa		13.46	□□□□□ -0.25
MRPL55-223	ENST00000459783	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.46	□□□□□ -0.25
MRPL55-223	ENST00000459783	GIGYF1	O75420	1035 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPL55-223	ENST00000459783	A1BG	P04217	495 aa		13.45	□□□□□ -0.26
MRPL55-223	ENST00000459783	PIP4K2A	P48426	406 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPL55-223	ENST00000459783	CCDC27	Q2M243	656 aa		13.45	□□□□□ -0.26
MRPL55-223	ENST00000459783	SALL2	Q9Y467	1007 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPL55-223	ENST00000459783	NBPF26	B4DH59	902 aa		13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	SNRPA1	P09661	255 aa	Known RBP	13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	NCBP3	Q53F19	620 aa	Known RBP	13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	MSL1	Q68DK7	614 aa		13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	NBPF10	Q6P3W6	841 aa	Known RBP	13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	NBPF15	Q8N660	670 aa		13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	ARHGEF1	Q92888	912 aa	Known RBP	13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	CFAP44	Q96MT7	982 aa		13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	MTFR1L	Q9H019	292 aa		13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	MBIP	Q9NS73	344 aa		13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	BABAM1	Q9NWV8	329 aa		13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	RTCB	Q9Y3I0	505 aa	Known RBP	13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	LAS1L	Q9Y4W2	734 aa	Known RBP	13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	C4A	P0C0L4	1744 aa		13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	COL24A1	Q17RW2	1714 aa		13.44	□□□□□ -0.26
MRPL55-223	ENST00000459783	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.43	□□□□□ -0.26
MRPL55-223	ENST00000459783	SRP68	Q9UHB9	627 aa	Known RBP	13.43	□□□□□ -0.26
MRPL55-223	ENST00000459783	ZNF521	Q96K83	1311 aa		13.42	□□□□□ -0.26
MRPL55-223	ENST00000459783	MSH5	O43196	834 aa		13.42	□□□□□ -0.26
MRPL55-223	ENST00000459783	STARD3NL	O95772	234 aa		13.42	□□□□□ -0.26
MRPL55-223	ENST00000459783	CANX	P27824	592 aa	Known RBP	13.42	□□□□□ -0.26
MRPL55-223	ENST00000459783	EIF5	P55010	431 aa	Known RBP	13.42	□□□□□ -0.26
MRPL55-223	ENST00000459783	SLC16A10	Q8TF71	515 aa		13.42	□□□□□ -0.26
MRPL55-223	ENST00000459783	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPL55-223	ENST00000459783	SPON1	Q9HCB6	807 aa		13.42	□□□□□ -0.26
MRPL55-223	ENST00000459783	IFT57	Q9NWB7	429 aa		13.42	□□□□□ -0.26
MRPL55-223	ENST00000459783	COL15A1	P39059	1388 aa		13.42	□□□□□ -0.26
MRPL55-223	ENST00000459783	LAMB4	A4D0S4	1761 aa		13.41	□□□□□ -0.26
MRPL55-223	ENST00000459783	ADRA2B	P18089	450 aa		13.41	□□□□□ -0.26
MRPL55-223	ENST00000459783	TRAPPC3L	Q5T215	181 aa		13.41	□□□□□ -0.26
MRPL55-223	ENST00000459783	FLAD1	Q8NFF5	587 aa		13.41	□□□□□ -0.26
MRPL55-223	ENST00000459783	TSR2	Q969E8	191 aa	Known RBP	13.41	□□□□□ -0.26
MRPL55-223	ENST00000459783	BCL2L12	Q9HB09	334 aa		13.41	□□□□□ -0.26
MRPL55-223	ENST00000459783	USP42	Q9H9J4	1324 aa	Known RBP	13.4	□□□□□ -0.26
MRPL55-223	ENST00000459783	GYS1	P13807	737 aa		13.4	□□□□□ -0.26
MRPL55-223	ENST00000459783	HMGB2	P26583	209 aa	Known RBP	13.4	□□□□□ -0.26
MRPL55-223	ENST00000459783	GNAI1	P63096	354 aa		13.39	□□□□□ -0.27
MRPL55-223	ENST00000459783	PDIA6	Q15084	440 aa		13.39	□□□□□ -0.27
MRPL55-223	ENST00000459783	PROSER3	Q2NL68	480 aa		13.39	□□□□□ -0.27
MRPL55-223	ENST00000459783	LRP10	Q7Z4F1	713 aa		13.39	□□□□□ -0.27
MRPL55-223	ENST00000459783	C8orf58	Q8NAV2	365 aa		13.39	□□□□□ -0.27
MRPL55-223	ENST00000459783	IL16	Q14005	1332 aa		13.39	□□□□□ -0.27
MRPL55-223	ENST00000459783	IL6ST	P40189	918 aa	Predicted RBP	13.38	□□□□□ -0.27
MRPL55-223	ENST00000459783	FKBP8	Q14318	412 aa		13.38	□□□□□ -0.27
MRPL55-223	ENST00000459783	TSPYL6	Q8N831	410 aa		13.38	□□□□□ -0.27
MRPL55-223	ENST00000459783	ANXA1	P04083	346 aa		13.37	□□□□□ -0.27
MRPL55-223	ENST00000459783	RFC4	P35249	363 aa		13.37	□□□□□ -0.27
MRPL55-223	ENST00000459783	CALD1	Q05682	793 aa	Known RBP	13.37	□□□□□ -0.27
MRPL55-223	ENST00000459783	DUSP27	Q5VZP5	1158 aa		13.37	□□□□□ -0.27
MRPL55-223	ENST00000459783	USPL1	Q5W0Q7	1092 aa		13.37	□□□□□ -0.27
MRPL55-223	ENST00000459783	WDR63	Q8IWG1	891 aa		13.37	□□□□□ -0.27
MRPL55-223	ENST00000459783	NECTIN2	Q92692	538 aa		13.37	□□□□□ -0.27
MRPL55-223	ENST00000459783	NARF	Q9UHQ1	456 aa		13.37	□□□□□ -0.27
MRPL55-223	ENST00000459783	TBC1D2B	Q9UPU7	963 aa		13.37	□□□□□ -0.27
MRPL55-223	ENST00000459783	FANCI	Q9NVI1	1328 aa		13.37	□□□□□ -0.27
MRPL55-223	ENST00000459783	CAMTA2	O94983	1202 aa		13.36	□□□□□ -0.27
MRPL55-223	ENST00000459783	EIF2S2	P20042	333 aa	Known RBP	13.36	□□□□□ -0.27
MRPL55-223	ENST00000459783	DDR1	Q08345	913 aa		13.36	□□□□□ -0.27
MRPL55-223	ENST00000459783	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.36	□□□□□ -0.27
MRPL55-223	ENST00000459783	SCN7A	Q01118	1682 aa		13.36	□□□□□ -0.27
MRPL55-223	ENST00000459783	ELL2	O00472	640 aa	Predicted RBP	13.35	□□□□□ -0.27
MRPL55-223	ENST00000459783	TTLL7	Q6ZT98	887 aa		13.35	□□□□□ -0.27
MRPL55-223	ENST00000459783	NGEF	Q8N5V2	710 aa		13.35	□□□□□ -0.27
MRPL55-223	ENST00000459783	ARX	Q96QS3	562 aa		13.35	□□□□□ -0.27
MRPL55-223	ENST00000459783	MMP10	P09238	476 aa		13.34	□□□□□ -0.27
MRPL55-223	ENST00000459783	HOXB7	P09629	217 aa		13.34	□□□□□ -0.27
MRPL55-223	ENST00000459783	ERBB4	Q15303	1308 aa		13.34	□□□□□ -0.27
MRPL55-223	ENST00000459783	BCOR	Q6W2J9	1755 aa		13.33	□□□□□ -0.28
MRPL55-223	ENST00000459783	MYL6B	P14649	208 aa		13.33	□□□□□ -0.28
MRPL55-223	ENST00000459783	TM4SF1	P30408	202 aa		13.33	□□□□□ -0.28
MRPL55-223	ENST00000459783	NFIX	Q14938	502 aa		13.33	□□□□□ -0.28
MRPL55-223	ENST00000459783	HDGFL1	Q5TGJ6	251 aa		13.33	□□□□□ -0.28
MRPL55-223	ENST00000459783	DZIP3	Q86Y13	1208 aa	Known RBP	13.33	□□□□□ -0.28
MRPL55-223	ENST00000459783	NLGN1	Q8N2Q7	840 aa		13.33	□□□□□ -0.28
MRPL55-223	ENST00000459783	CDCA7L	Q96GN5	454 aa		13.33	□□□□□ -0.28
MRPL55-223	ENST00000459783	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.33	□□□□□ -0.28
MRPL55-223	ENST00000459783	CHPF2	Q9P2E5	772 aa		13.33	□□□□□ -0.28
MRPL55-223	ENST00000459783		A0A087WZG4	1122 aa		13.32	□□□□□ -0.28
MRPL55-223	ENST00000459783	ZPR1	O75312	459 aa		13.32	□□□□□ -0.28
MRPL55-223	ENST00000459783	POLD1	P28340	1107 aa		13.32	□□□□□ -0.28
MRPL55-223	ENST00000459783	EXOSC9	Q06265	439 aa	Known RBP	13.32	□□□□□ -0.28
MRPL55-223	ENST00000459783	POLRMT	O00411	1230 aa	Known RBP	13.31	□□□□□ -0.28
MRPL55-223	ENST00000459783	HLF	Q16534	295 aa		13.31	□□□□□ -0.28
MRPL55-223	ENST00000459783	TBC1D9B	Q66K14	1250 aa		13.31	□□□□□ -0.28
MRPL55-223	ENST00000459783	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
MRPL55-223	ENST00000459783	TCERG1	O14776	1098 aa	Known RBP	13.3	□□□□□ -0.28
MRPL55-223	ENST00000459783	SLFN5	Q08AF3	891 aa		13.3	□□□□□ -0.28
MRPL55-223	ENST00000459783	NLGN2	Q8NFZ4	835 aa		13.3	□□□□□ -0.28
MRPL55-223	ENST00000459783	SYT17	Q9BSW7	474 aa		13.3	□□□□□ -0.28
MRPL55-223	ENST00000459783	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.3	□□□□□ -0.28
MRPL55-223	ENST00000459783	C10orf71	Q711Q0	1435 aa		13.3	□□□□□ -0.28
MRPL55-223	ENST00000459783	GOLGA2	Q08379	1002 aa		13.29	□□□□□ -0.28

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