RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 TRIM35Q9UPQ4 493 aa11.16□□□□□ -0.62
SP140-207ENST00000456542 PHF14O94880 888 aa11.15□□□□□ -0.62
SP140-207ENST00000456542 STARD3NLO95772 234 aa11.15□□□□□ -0.62
SP140-207ENST00000456542 NCBP3Q53F19 620 aaKnown RBP11.15□□□□□ -0.62
SP140-207ENST00000456542 INTS5Q6P9B9 1019 aaKnown RBP11.15□□□□□ -0.62
SP140-207ENST00000456542 CNKSR2Q8WXI2 1034 aa11.15□□□□□ -0.62
SP140-207ENST00000456542 ATF5Q9Y2D1 282 aaPredicted RBP11.15□□□□□ -0.62
SP140-207ENST00000456542 SNRPA1P09661 255 aaKnown RBP11.14□□□□□ -0.63
SP140-207ENST00000456542 TRAPPC3LQ5T215 181 aa11.14□□□□□ -0.63
SP140-207ENST00000456542 SOS1Q07889 1333 aaPredicted RBP11.13□□□□□ -0.63
SP140-207ENST00000456542 POLD1P28340 1107 aa11.13□□□□□ -0.63
SP140-207ENST00000456542 EIF4A1P60842 406 aaKnown RBP11.13□□□□□ -0.63
SP140-207ENST00000456542 CACNB1Q02641 598 aaPredicted RBP11.13□□□□□ -0.63
SP140-207ENST00000456542 ARHGEF1Q92888 912 aaKnown RBP11.13□□□□□ -0.63
SP140-207ENST00000456542 MIS18AQ9NYP9 233 aa11.13□□□□□ -0.63
SP140-207ENST00000456542 PPP1R1BQ9UD71 204 aaPredicted RBP11.13□□□□□ -0.63
SP140-207ENST00000456542 ZBTB1Q9Y2K1 713 aa11.13□□□□□ -0.63
SP140-207ENST00000456542 CCER2I3L3R5 266 aa11.12□□□□□ -0.63
SP140-207ENST00000456542 CHL1O00533 1208 aa11.12□□□□□ -0.63
SP140-207ENST00000456542 RFC4P35249 363 aa11.12□□□□□ -0.63
SP140-207ENST00000456542 CALD1Q05682 793 aaKnown RBP11.12□□□□□ -0.63
SP140-207ENST00000456542 CCDC27Q2M243 656 aa11.12□□□□□ -0.63
SP140-207ENST00000456542 SMIM5Q71RC9 77 aa11.12□□□□□ -0.63
SP140-207ENST00000456542 TSPYL4Q9UJ04 414 aa11.12□□□□□ -0.63
SP140-207ENST00000456542 COL15A1P39059 1388 aa11.12□□□□□ -0.63
SP140-207ENST00000456542 USP42Q9H9J4 1324 aaKnown RBP11.11□□□□□ -0.63
SP140-207ENST00000456542 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
SP140-207ENST00000456542 IL6STP40189 918 aaPredicted RBP11.11□□□□□ -0.63
SP140-207ENST00000456542 DIEXFQ68CQ4 756 aaKnown RBP11.11□□□□□ -0.63
SP140-207ENST00000456542 CFAP44Q96MT7 982 aa11.11□□□□□ -0.63
SP140-207ENST00000456542 ARXQ96QS3 562 aa11.11□□□□□ -0.63
SP140-207ENST00000456542 USP16Q9Y5T5 823 aa11.11□□□□□ -0.63
SP140-207ENST00000456542 SCN7AQ01118 1682 aa11.11□□□□□ -0.63
SP140-207ENST00000456542 PRAMEF22A3QJZ6 481 aa11.1□□□□□ -0.63
SP140-207ENST00000456542 CANXP27824 592 aaKnown RBP11.1□□□□□ -0.63
SP140-207ENST00000456542 EIF5P55010 431 aaKnown RBP11.1□□□□□ -0.63
SP140-207ENST00000456542 MSL1Q68DK7 614 aa11.1□□□□□ -0.63
SP140-207ENST00000456542 FAM9BQ8IZU0 186 aa11.1□□□□□ -0.63
SP140-207ENST00000456542 NLGN1Q8N2Q7 840 aa11.1□□□□□ -0.63
SP140-207ENST00000456542 NGEFQ8N5V2 710 aa11.1□□□□□ -0.63
SP140-207ENST00000456542 IFT57Q9NWB7 429 aa11.1□□□□□ -0.63
SP140-207ENST00000456542 BCORQ6W2J9 1755 aa11.1□□□□□ -0.63
SP140-207ENST00000456542 A0A087WZG4 1122 aa11.09□□□□□ -0.63
SP140-207ENST00000456542 A1BGP04217 495 aa11.09□□□□□ -0.63
SP140-207ENST00000456542 ZNF853P0CG23 659 aa11.09□□□□□ -0.63
SP140-207ENST00000456542 GYS1P13807 737 aa11.09□□□□□ -0.63
SP140-207ENST00000456542 GNAI1P63096 354 aa11.09□□□□□ -0.63
SP140-207ENST00000456542 WWC1Q8IX03 1113 aa11.09□□□□□ -0.63
SP140-207ENST00000456542 NARFQ9UHQ1 456 aa11.09□□□□□ -0.63
SP140-207ENST00000456542 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
SP140-207ENST00000456542 KIF13BQ9NQT8 1826 aa11.08□□□□□ -0.64
SP140-207ENST00000456542 ZPR1O75312 459 aa11.08□□□□□ -0.64
SP140-207ENST00000456542 RNF216Q9NWF9 866 aaPredicted RBP11.08□□□□□ -0.64
SP140-207ENST00000456542 IL16Q14005 1332 aa11.08□□□□□ -0.64
SP140-207ENST00000456542 HOXB7P09629 217 aa11.07□□□□□ -0.64
SP140-207ENST00000456542 NPM2Q86SE8 214 aaKnown RBP11.07□□□□□ -0.64
SP140-207ENST00000456542 FHDC1Q9C0D6 1143 aaPredicted RBP11.07□□□□□ -0.64
SP140-207ENST00000456542 MBIPQ9NS73 344 aa11.07□□□□□ -0.64
SP140-207ENST00000456542 SRP68Q9UHB9 627 aaKnown RBP11.07□□□□□ -0.64
SP140-207ENST00000456542 LAS1LQ9Y4W2 734 aaKnown RBP11.07□□□□□ -0.64
SP140-207ENST00000456542 SRCAPQ6ZRS2 3230 aa11.07□□□□□ -0.64
SP140-207ENST00000456542 NBPF26B4DH59 902 aa11.06□□□□□ -0.64
SP140-207ENST00000456542 RGL2O15211 777 aa11.06□□□□□ -0.64
SP140-207ENST00000456542 MMP10P09238 476 aa11.06□□□□□ -0.64
SP140-207ENST00000456542 USPL1Q5W0Q7 1092 aa11.06□□□□□ -0.64
SP140-207ENST00000456542 NBPF10Q6P3W6 841 aaKnown RBP11.06□□□□□ -0.64
SP140-207ENST00000456542 NBPF15Q8N660 670 aa11.06□□□□□ -0.64
SP140-207ENST00000456542 SYT17Q9BSW7 474 aa11.06□□□□□ -0.64
SP140-207ENST00000456542 ZNF330Q9Y3S2 320 aaPredicted RBP11.06□□□□□ -0.64
SP140-207ENST00000456542 NRXN2Q9P2S2 1712 aa11.06□□□□□ -0.64
SP140-207ENST00000456542 AFDNP55196 1824 aaKnown RBP11.05□□□□□ -0.64
SP140-207ENST00000456542 FKBP8Q14318 412 aa11.05□□□□□ -0.64
SP140-207ENST00000456542 DZIP3Q86Y13 1208 aaKnown RBP11.05□□□□□ -0.64
SP140-207ENST00000456542 WDR63Q8IWG1 891 aa11.05□□□□□ -0.64
SP140-207ENST00000456542 BCL2L12Q9HB09 334 aa11.05□□□□□ -0.64
SP140-207ENST00000456542 CD2APQ9Y5K6 639 aa11.05□□□□□ -0.64
SP140-207ENST00000456542 CAMTA2O94983 1202 aa11.04□□□□□ -0.64
SP140-207ENST00000456542 TM4SF1P30408 202 aa11.04□□□□□ -0.64
SP140-207ENST00000456542 PIP4K2AP48426 406 aaPredicted RBP11.04□□□□□ -0.64
SP140-207ENST00000456542 TBC1D2BQ9UPU7 963 aa11.04□□□□□ -0.64
SP140-207ENST00000456542 PARP3Q9Y6F1 533 aa11.04□□□□□ -0.64
SP140-207ENST00000456542 NUP98P52948 1817 aa11.04□□□□□ -0.64
SP140-207ENST00000456542 C10orf71Q711Q0 1435 aa11.03□□□□□ -0.64
SP140-207ENST00000456542 KRT24Q2M2I5 525 aa11.03□□□□□ -0.64
SP140-207ENST00000456542 DUSP27Q5VZP5 1158 aa11.03□□□□□ -0.64
SP140-207ENST00000456542 CLEC4GQ6UXB4 293 aa11.03□□□□□ -0.64
SP140-207ENST00000456542 MIER1Q8N108 512 aa11.03□□□□□ -0.64
SP140-207ENST00000456542 KIAA1551Q9HCM1 1747 aa11.03□□□□□ -0.64
SP140-207ENST00000456542 CACNA1FO60840 1977 aa11.03□□□□□ -0.64
SP140-207ENST00000456542 SENP3-EIF4A1A0A087X0R7 540 aa11.02□□□□□ -0.65
SP140-207ENST00000456542 POLRMTO00411 1230 aaKnown RBP11.02□□□□□ -0.65
SP140-207ENST00000456542 EIF2S2P20042 333 aaKnown RBP11.02□□□□□ -0.65
SP140-207ENST00000456542 DDR1Q08345 913 aa11.02□□□□□ -0.65
SP140-207ENST00000456542 NFIXQ14938 502 aa11.02□□□□□ -0.65
SP140-207ENST00000456542 PDIA6Q15084 440 aa11.02□□□□□ -0.65
SP140-207ENST00000456542 LRP10Q7Z4F1 713 aa11.02□□□□□ -0.65
SP140-207ENST00000456542 KLHL34Q8N239 644 aa11.02□□□□□ -0.65
SP140-207ENST00000456542 CHMP4AQ9BY43 222 aa11.02□□□□□ -0.65
SP140-207ENST00000456542 ZNF652Q9Y2D9 606 aa11.02□□□□□ -0.65
SP140-207ENST00000456542 ZNF521Q96K83 1311 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms