RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 PRAMEF22A3QJZ6 481 aa22.19■■□□□ 1.14
PMPCB-206ENST00000456433 SSFA2P28290 1259 aa22.19■■□□□ 1.14
PMPCB-206ENST00000456433 GOLGA2Q08379 1002 aa22.19■■□□□ 1.14
PMPCB-206ENST00000456433 TFCP2L1Q9NZI6 479 aa22.19■■□□□ 1.14
PMPCB-206ENST00000456433 USP16Q9Y5T5 823 aa22.19■■□□□ 1.14
PMPCB-206ENST00000456433 SOS1Q07889 1333 aaPredicted RBP22.19■■□□□ 1.14
PMPCB-206ENST00000456433 FANCIQ9NVI1 1328 aa22.19■■□□□ 1.14
PMPCB-206ENST00000456433 PNPLA7Q6ZV29 1317 aa22.18■■□□□ 1.14
PMPCB-206ENST00000456433 RPS6KA4O75676 772 aa22.18■■□□□ 1.14
PMPCB-206ENST00000456433 HNRNPUQ00839 825 aaKnown RBP eCLIP22.18■■□□□ 1.14
PMPCB-206ENST00000456433 R3HDM1Q15032 1099 aaKnown RBP22.18■■□□□ 1.14
PMPCB-206ENST00000456433 FLAD1Q8NFF5 587 aa22.18■■□□□ 1.14
PMPCB-206ENST00000456433 MYH16Q9H6N6 1097 aa22.18■■□□□ 1.14
PMPCB-206ENST00000456433 SPINK5Q9NQ38 1064 aaPredicted RBP22.18■■□□□ 1.14
PMPCB-206ENST00000456433 GNPATO15228 680 aa22.17■■□□□ 1.14
PMPCB-206ENST00000456433 ADRA2BP18089 450 aa22.17■■□□□ 1.14
PMPCB-206ENST00000456433 TSR2Q969E8 191 aaKnown RBP22.17■■□□□ 1.14
PMPCB-206ENST00000456433 ERBB4Q15303 1308 aa22.16■■□□□ 1.14
PMPCB-206ENST00000456433 E9PSI1 815 aa22.16■■□□□ 1.14
PMPCB-206ENST00000456433 KRT24Q2M2I5 525 aa22.16■■□□□ 1.14
PMPCB-206ENST00000456433 AMIGO3Q86WK7 504 aa22.16■■□□□ 1.14
PMPCB-206ENST00000456433 ZBTB1Q9Y2K1 713 aa22.16■■□□□ 1.14
PMPCB-206ENST00000456433 RTCBQ9Y3I0 505 aaKnown RBP22.16■■□□□ 1.14
PMPCB-206ENST00000456433 ZBED9Q6R2W3 1325 aa22.15■■□□□ 1.14
PMPCB-206ENST00000456433 SLFN5Q08AF3 891 aa22.14■■□□□ 1.13
PMPCB-206ENST00000456433 DUSP27Q5VZP5 1158 aa22.14■■□□□ 1.13
PMPCB-206ENST00000456433 C4AP0C0L4 1744 aa22.14■■□□□ 1.13
PMPCB-206ENST00000456433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.13■■□□□ 1.13
PMPCB-206ENST00000456433 PSDA5PKW4 1024 aaPredicted RBP22.13■■□□□ 1.13
PMPCB-206ENST00000456433 A1BGP04217 495 aa22.13■■□□□ 1.13
PMPCB-206ENST00000456433 IL6STP40189 918 aaPredicted RBP22.13■■□□□ 1.13
PMPCB-206ENST00000456433 TRMT2AQ8IZ69 625 aaKnown RBP22.13■■□□□ 1.13
PMPCB-206ENST00000456433 C8orf58Q8NAV2 365 aa22.13■■□□□ 1.13
PMPCB-206ENST00000456433 EIF5P55010 431 aaKnown RBP22.12■■□□□ 1.13
PMPCB-206ENST00000456433 COL23A1Q86Y22 540 aaPredicted RBP22.12■■□□□ 1.13
PMPCB-206ENST00000456433 TRAPPC3LQ5T215 181 aa22.11■■□□□ 1.13
PMPCB-206ENST00000456433 SLC16A10Q8TF71 515 aa22.11■■□□□ 1.13
PMPCB-206ENST00000456433 CHMP4AQ9BY43 222 aa22.11■■□□□ 1.13
PMPCB-206ENST00000456433 COL15A1P39059 1388 aa22.11■■□□□ 1.13
PMPCB-206ENST00000456433 NBPF26B4DH59 902 aa22.1■■□□□ 1.13
PMPCB-206ENST00000456433 COL24A1Q17RW2 1714 aa22.1■■□□□ 1.13
PMPCB-206ENST00000456433 NBPF10Q6P3W6 841 aaKnown RBP22.1■■□□□ 1.13
PMPCB-206ENST00000456433 NBPF15Q8N660 670 aa22.1■■□□□ 1.13
PMPCB-206ENST00000456433 CANXP27824 592 aaKnown RBP22.09■■□□□ 1.13
PMPCB-206ENST00000456433 TSPYL6Q8N831 410 aa22.09■■□□□ 1.13
PMPCB-206ENST00000456433 CDCA7LQ96GN5 454 aa22.09■■□□□ 1.13
PMPCB-206ENST00000456433 A0A087WZG4 1122 aa22.08■■□□□ 1.13
PMPCB-206ENST00000456433 PHF14O94880 888 aa22.08■■□□□ 1.13
PMPCB-206ENST00000456433 EIF2S2P20042 333 aaKnown RBP22.08■■□□□ 1.13
PMPCB-206ENST00000456433 EXOSC9Q06265 439 aaKnown RBP22.08■■□□□ 1.13
PMPCB-206ENST00000456433 TWISTNBQ3B726 338 aaPredicted RBP22.08■■□□□ 1.13
PMPCB-206ENST00000456433 HDGFL1Q5TGJ6 251 aa22.08■■□□□ 1.13
PMPCB-206ENST00000456433 ARHGEF1Q92888 912 aaKnown RBP22.08■■□□□ 1.13
PMPCB-206ENST00000456433 PDGFDQ9GZP0 370 aaPredicted RBP22.08■■□□□ 1.13
PMPCB-206ENST00000456433 CACNA1FO60840 1977 aa22.08■■□□□ 1.12
PMPCB-206ENST00000456433 PDIA6Q15084 440 aa22.07■■□□□ 1.12
PMPCB-206ENST00000456433 LRP10Q7Z4F1 713 aa22.07■■□□□ 1.12
PMPCB-206ENST00000456433 ELL2O00472 640 aaPredicted RBP22.06■■□□□ 1.12
PMPCB-206ENST00000456433 SMIM5Q71RC9 77 aa22.06■■□□□ 1.12
PMPCB-206ENST00000456433 DDX21Q9NR30 783 aaKnown RBP eCLIP22.06■■□□□ 1.12
PMPCB-206ENST00000456433 USP42Q9H9J4 1324 aaKnown RBP22.06■■□□□ 1.12
PMPCB-206ENST00000456433 SCN7AQ01118 1682 aa22.05■■□□□ 1.12
PMPCB-206ENST00000456433 RFC4P35249 363 aa22.05■■□□□ 1.12
PMPCB-206ENST00000456433 NARFQ9UHQ1 456 aa22.05■■□□□ 1.12
PMPCB-206ENST00000456433 BCORQ6W2J9 1755 aa22.04■■□□□ 1.12
PMPCB-206ENST00000456433 VAMP4O75379 141 aa22.04■■□□□ 1.12
PMPCB-206ENST00000456433 PIP4K2AP48426 406 aaPredicted RBP22.04■■□□□ 1.12
PMPCB-206ENST00000456433 CCDC30Q5VVM6 783 aa22.04■■□□□ 1.12
PMPCB-206ENST00000456433 MTFR1LQ9H019 292 aa22.04■■□□□ 1.12
PMPCB-206ENST00000456433 DBF4Q9UBU7 674 aaPredicted RBP22.04■■□□□ 1.12
PMPCB-206ENST00000456433 RGL2O15211 777 aa22.03■■□□□ 1.12
PMPCB-206ENST00000456433 NPM2Q86SE8 214 aaKnown RBP22.03■■□□□ 1.12
PMPCB-206ENST00000456433 CHPF2Q9P2E5 772 aa22.03■■□□□ 1.12
PMPCB-206ENST00000456433 MSH5O43196 834 aa22.02■■□□□ 1.12
PMPCB-206ENST00000456433 CT47B1P0C2W7 299 aaPredicted RBP22.02■■□□□ 1.12
PMPCB-206ENST00000456433 PROSER3Q2NL68 480 aa22.02■■□□□ 1.12
PMPCB-206ENST00000456433 NECTIN2Q92692 538 aa22.01■■□□□ 1.11
PMPCB-206ENST00000456433 ZNF428Q96B54 188 aa22.01■■□□□ 1.11
PMPCB-206ENST00000456433 SRCAPQ6ZRS2 3230 aa22.01■■□□□ 1.11
PMPCB-206ENST00000456433 ZPR1O75312 459 aa22■■□□□ 1.11
PMPCB-206ENST00000456433 GYS1P13807 737 aa22■■□□□ 1.11
PMPCB-206ENST00000456433 MYL6BP14649 208 aa22■■□□□ 1.11
PMPCB-206ENST00000456433 DZIP3Q86Y13 1208 aaKnown RBP22■■□□□ 1.11
PMPCB-206ENST00000456433 HYPKQ9NX55 129 aa22■■□□□ 1.11
PMPCB-206ENST00000456433 ZNF330Q9Y3S2 320 aaPredicted RBP22■■□□□ 1.11
PMPCB-206ENST00000456433 LRP5O75197 1615 aa21.99■■□□□ 1.11
PMPCB-206ENST00000456433 CAMTA2O94983 1202 aa21.99■■□□□ 1.11
PMPCB-206ENST00000456433 ZBTB7AO95365 584 aa21.99■■□□□ 1.11
PMPCB-206ENST00000456433 SRP68Q9UHB9 627 aaKnown RBP21.99■■□□□ 1.11
PMPCB-206ENST00000456433 ANXA1P04083 346 aa21.98■■□□□ 1.11
PMPCB-206ENST00000456433 USPL1Q5W0Q7 1092 aa21.98■■□□□ 1.11
PMPCB-206ENST00000456433 NLGN1Q8N2Q7 840 aa21.98■■□□□ 1.11
PMPCB-206ENST00000456433 SGIP1Q9BQI5 828 aa21.98■■□□□ 1.11
PMPCB-206ENST00000456433 BCL2L12Q9HB09 334 aa21.98■■□□□ 1.11
PMPCB-206ENST00000456433 SPON1Q9HCB6 807 aa21.98■■□□□ 1.11
PMPCB-206ENST00000456433 TBC1D2BQ9UPU7 963 aa21.98■■□□□ 1.11
PMPCB-206ENST00000456433 ERVV-1B6SEH8 477 aa21.97■■□□□ 1.11
PMPCB-206ENST00000456433 STK31Q9BXU1 1019 aa21.97■■□□□ 1.11
PMPCB-206ENST00000456433 CLEC4GQ6UXB4 293 aa21.96■■□□□ 1.11
PMPCB-206ENST00000456433 TTLL7Q6ZT98 887 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms