RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 UBR2Q8IWV8 1755 aa26.05■■□□□ 1.76
PMPCB-205ENST00000453466 CHL1O00533 1208 aa26.05■■□□□ 1.76
PMPCB-205ENST00000453466 EIF4A1P60842 406 aaKnown RBP26.05■■□□□ 1.76
PMPCB-205ENST00000453466 CASZ1Q86V15 1759 aa26.05■■□□□ 1.76
PMPCB-205ENST00000453466 CCDC27Q2M243 656 aa26.04■■□□□ 1.76
PMPCB-205ENST00000453466 CICQ96RK0 1608 aaPredicted RBP26.04■■□□□ 1.76
PMPCB-205ENST00000453466 ARHGEF1Q92888 912 aaKnown RBP26.04■■□□□ 1.76
PMPCB-205ENST00000453466 CFAP44Q96MT7 982 aa26.04■■□□□ 1.76
PMPCB-205ENST00000453466 USP16Q9Y5T5 823 aa26.04■■□□□ 1.76
PMPCB-205ENST00000453466 QSER1Q2KHR3 1735 aa26.03■■□□□ 1.76
PMPCB-205ENST00000453466 TJP1Q07157 1748 aa26.03■■□□□ 1.76
PMPCB-205ENST00000453466 SENP3-EIF4A1A0A087X0R7 540 aa26.03■■□□□ 1.76
PMPCB-205ENST00000453466 RFC4P35249 363 aa26.03■■□□□ 1.76
PMPCB-205ENST00000453466 SRCAPQ6ZRS2 3230 aa26.03■■□□□ 1.76
PMPCB-205ENST00000453466 COL5A3P25940 1745 aaPredicted RBP26.02■■□□□ 1.76
PMPCB-205ENST00000453466 CANXP27824 592 aaKnown RBP26.02■■□□□ 1.76
PMPCB-205ENST00000453466 ZBTB1Q9Y2K1 713 aa26.02■■□□□ 1.76
PMPCB-205ENST00000453466 PRAMEF22A3QJZ6 481 aa26.01■■□□□ 1.75
PMPCB-205ENST00000453466 GIGYF1O75420 1035 aaPredicted RBP26.01■■□□□ 1.75
PMPCB-205ENST00000453466 GNAI1P63096 354 aa26.01■■□□□ 1.75
PMPCB-205ENST00000453466 WWC1Q8IX03 1113 aa26■■□□□ 1.75
PMPCB-205ENST00000453466 POLD1P28340 1107 aa25.99■■□□□ 1.75
PMPCB-205ENST00000453466 PTGER2P43116 358 aa25.99■■□□□ 1.75
PMPCB-205ENST00000453466 IFT57Q9NWB7 429 aa25.99■■□□□ 1.75
PMPCB-205ENST00000453466 PPP1R1BQ9UD71 204 aaPredicted RBP25.99■■□□□ 1.75
PMPCB-205ENST00000453466 UBR3Q6ZT12 1888 aa25.99■■□□□ 1.75
PMPCB-205ENST00000453466 TUBGCP6Q96RT7 1819 aa25.99■■□□□ 1.75
PMPCB-205ENST00000453466 SOS1Q07889 1333 aaPredicted RBP25.99■■□□□ 1.75
PMPCB-205ENST00000453466 A1BGP04217 495 aa25.98■■□□□ 1.75
PMPCB-205ENST00000453466 NPM2Q86SE8 214 aaKnown RBP25.98■■□□□ 1.75
PMPCB-205ENST00000453466 SALL2Q9Y467 1007 aaPredicted RBP25.98■■□□□ 1.75
PMPCB-205ENST00000453466 ZNF521Q96K83 1311 aa25.98■■□□□ 1.75
PMPCB-205ENST00000453466 MYH14Q7Z406 1995 aaKnown RBP25.97■■□□□ 1.75
PMPCB-205ENST00000453466 ZNF853P0CG23 659 aa25.97■■□□□ 1.75
PMPCB-205ENST00000453466 IL6STP40189 918 aaPredicted RBP25.97■■□□□ 1.75
PMPCB-205ENST00000453466 MSL1Q68DK7 614 aa25.97■■□□□ 1.75
PMPCB-205ENST00000453466 A0A087WZG4 1122 aa25.96■■□□□ 1.75
PMPCB-205ENST00000453466 EIF5P55010 431 aaKnown RBP25.96■■□□□ 1.75
PMPCB-205ENST00000453466 SGIP1Q9BQI5 828 aa25.96■■□□□ 1.75
PMPCB-205ENST00000453466 LRP5O75197 1615 aa25.96■■□□□ 1.75
PMPCB-205ENST00000453466 ZPR1O75312 459 aa25.95■■□□□ 1.74
PMPCB-205ENST00000453466 NLGN1Q8N2Q7 840 aa25.95■■□□□ 1.74
PMPCB-205ENST00000453466 MBIPQ9NS73 344 aa25.95■■□□□ 1.74
PMPCB-205ENST00000453466 KDM3BQ7LBC6 1761 aa25.95■■□□□ 1.74
PMPCB-205ENST00000453466 ZNF330Q9Y3S2 320 aaPredicted RBP25.94■■□□□ 1.74
PMPCB-205ENST00000453466 COL15A1P39059 1388 aa25.93■■□□□ 1.74
PMPCB-205ENST00000453466 WDR63Q8IWG1 891 aa25.93■■□□□ 1.74
PMPCB-205ENST00000453466 ARXQ96QS3 562 aa25.93■■□□□ 1.74
PMPCB-205ENST00000453466 IL16Q14005 1332 aa25.92■■□□□ 1.74
PMPCB-205ENST00000453466 GYS1P13807 737 aa25.92■■□□□ 1.74
PMPCB-205ENST00000453466 NARFQ9UHQ1 456 aa25.92■■□□□ 1.74
PMPCB-205ENST00000453466 USP42Q9H9J4 1324 aaKnown RBP25.91■■□□□ 1.74
PMPCB-205ENST00000453466 SRP68Q9UHB9 627 aaKnown RBP25.91■■□□□ 1.74
PMPCB-205ENST00000453466 EIF2S2P20042 333 aaKnown RBP25.9■■□□□ 1.74
PMPCB-205ENST00000453466 PIP4K2AP48426 406 aaPredicted RBP25.89■■□□□ 1.74
PMPCB-205ENST00000453466 USPL1Q5W0Q7 1092 aa25.89■■□□□ 1.74
PMPCB-205ENST00000453466 NBPF26B4DH59 902 aa25.88■■□□□ 1.73
PMPCB-205ENST00000453466 KRT24Q2M2I5 525 aa25.88■■□□□ 1.73
PMPCB-205ENST00000453466 NBPF10Q6P3W6 841 aaKnown RBP25.88■■□□□ 1.73
PMPCB-205ENST00000453466 NBPF15Q8N660 670 aa25.88■■□□□ 1.73
PMPCB-205ENST00000453466 HOXB7P09629 217 aa25.88■■□□□ 1.73
PMPCB-205ENST00000453466 GOLGA2Q08379 1002 aa25.88■■□□□ 1.73
PMPCB-205ENST00000453466 TBC1D2BQ9UPU7 963 aa25.88■■□□□ 1.73
PMPCB-205ENST00000453466 ERBB4Q15303 1308 aa25.87■■□□□ 1.73
PMPCB-205ENST00000453466 DUSP27Q5VZP5 1158 aa25.86■■□□□ 1.73
PMPCB-205ENST00000453466 MMP10P09238 476 aa25.85■■□□□ 1.73
PMPCB-205ENST00000453466 FKBP8Q14318 412 aa25.85■■□□□ 1.73
PMPCB-205ENST00000453466 DZIP3Q86Y13 1208 aaKnown RBP25.85■■□□□ 1.73
PMPCB-205ENST00000453466 MYL6BP14649 208 aa25.84■■□□□ 1.73
PMPCB-205ENST00000453466 TSR2Q969E8 191 aaKnown RBP25.84■■□□□ 1.73
PMPCB-205ENST00000453466 HDGFL1Q5TGJ6 251 aa25.83■■□□□ 1.72
PMPCB-205ENST00000453466 TRMT2AQ8IZ69 625 aaKnown RBP25.83■■□□□ 1.72
PMPCB-205ENST00000453466 NECTIN2Q92692 538 aa25.83■■□□□ 1.72
PMPCB-205ENST00000453466 CDCA7LQ96GN5 454 aa25.83■■□□□ 1.72
PMPCB-205ENST00000453466 CHMP4AQ9BY43 222 aa25.83■■□□□ 1.72
PMPCB-205ENST00000453466 FHDC1Q9C0D6 1143 aaPredicted RBP25.83■■□□□ 1.72
PMPCB-205ENST00000453466 PARP3Q9Y6F1 533 aa25.83■■□□□ 1.72
PMPCB-205ENST00000453466 ELL2O00472 640 aaPredicted RBP25.82■■□□□ 1.72
PMPCB-205ENST00000453466 SLFN5Q08AF3 891 aa25.81■■□□□ 1.72
PMPCB-205ENST00000453466 KLHL34Q8N239 644 aa25.81■■□□□ 1.72
PMPCB-205ENST00000453466 C8orf58Q8NAV2 365 aa25.81■■□□□ 1.72
PMPCB-205ENST00000453466 MYH16Q9H6N6 1097 aa25.81■■□□□ 1.72
PMPCB-205ENST00000453466 BCL2L12Q9HB09 334 aa25.81■■□□□ 1.72
PMPCB-205ENST00000453466 COL24A1Q17RW2 1714 aa25.81■■□□□ 1.72
PMPCB-205ENST00000453466 E9PSI1 815 aa25.8■■□□□ 1.72
PMPCB-205ENST00000453466 TM4SF1P30408 202 aa25.8■■□□□ 1.72
PMPCB-205ENST00000453466 C4AP0C0L4 1744 aa25.79■■□□□ 1.72
PMPCB-205ENST00000453466 CAMTA2O94983 1202 aa25.79■■□□□ 1.72
PMPCB-205ENST00000453466 PDIA6Q15084 440 aa25.79■■□□□ 1.72
PMPCB-205ENST00000453466 SYT17Q9BSW7 474 aa25.79■■□□□ 1.72
PMPCB-205ENST00000453466 LAMB4A4D0S4 1761 aa25.79■■□□□ 1.72
PMPCB-205ENST00000453466 CLEC4GQ6UXB4 293 aa25.78■■□□□ 1.72
PMPCB-205ENST00000453466 DDX21Q9NR30 783 aaKnown RBP eCLIP25.78■■□□□ 1.72
PMPCB-205ENST00000453466 DBF4Q9UBU7 674 aaPredicted RBP25.78■■□□□ 1.72
PMPCB-205ENST00000453466 ZNF652Q9Y2D9 606 aa25.78■■□□□ 1.72
PMPCB-205ENST00000453466 FANCIQ9NVI1 1328 aa25.77■■□□□ 1.72
PMPCB-205ENST00000453466 RGL2O15211 777 aa25.77■■□□□ 1.72
PMPCB-205ENST00000453466 NFIXQ14938 502 aa25.77■■□□□ 1.72
PMPCB-205ENST00000453466 KIF6Q6ZMV9 814 aa25.77■■□□□ 1.72
PMPCB-205ENST00000453466 SPINK5Q9NQ38 1064 aaPredicted RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms