RNA–Protein interactions for RNA: ENST00000452293.5

RETREG2-207, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-207ENST00000452293 WDR43Q15061 677 aaKnown RBP eCLIP34.49■■■■□ 3.11
RETREG2-207ENST00000452293 PRAMEF22A3QJZ6 481 aa34.48■■■■□ 3.11
RETREG2-207ENST00000452293 RRP7AQ9Y3A4 280 aaKnown RBP34.48■■■■□ 3.11
RETREG2-207ENST00000452293 DCAF8L1A6NGE4 600 aa34.46■■■■□ 3.11
RETREG2-207ENST00000452293 ADAMTS8Q9UP79 889 aa34.46■■■■□ 3.11
RETREG2-207ENST00000452293 PELP1Q8IZL8 1130 aaKnown RBP34.45■■■■□ 3.11
RETREG2-207ENST00000452293 USP42Q9H9J4 1324 aaKnown RBP34.45■■■■□ 3.11
RETREG2-207ENST00000452293 COL15A1P39059 1388 aa34.45■■■■□ 3.11
RETREG2-207ENST00000452293 RIPK4P57078 832 aa34.44■■■■□ 3.1
RETREG2-207ENST00000452293 TAF7Q15545 349 aaPredicted RBP34.44■■■■□ 3.1
RETREG2-207ENST00000452293 CCDC184Q52MB2 194 aa34.44■■■■□ 3.1
RETREG2-207ENST00000452293 STARD3NLO95772 234 aa34.43■■■■□ 3.1
RETREG2-207ENST00000452293 FKBP8Q14318 412 aa34.43■■■■□ 3.1
RETREG2-207ENST00000452293 NEUROD2Q15784 382 aa34.43■■■■□ 3.1
RETREG2-207ENST00000452293 TMPOP42166 694 aaKnown RBP34.42■■■■□ 3.1
RETREG2-207ENST00000452293 PIP4K2AP48426 406 aaPredicted RBP34.42■■■■□ 3.1
RETREG2-207ENST00000452293 USPL1Q5W0Q7 1092 aa34.42■■■■□ 3.1
RETREG2-207ENST00000452293 NLGN1Q8N2Q7 840 aa34.42■■■■□ 3.1
RETREG2-207ENST00000452293 ZNF330Q9Y3S2 320 aaPredicted RBP34.42■■■■□ 3.1
RETREG2-207ENST00000452293 A1BGP04217 495 aa34.41■■■■□ 3.1
RETREG2-207ENST00000452293 USP16Q9Y5T5 823 aa34.41■■■■□ 3.1
RETREG2-207ENST00000452293 N4BP2Q86UW6 1770 aaPredicted RBP34.41■■■■□ 3.1
RETREG2-207ENST00000452293 KIF13BQ9NQT8 1826 aa34.4■■■■□ 3.1
RETREG2-207ENST00000452293 WWC3Q9ULE0 1092 aa34.4■■■■□ 3.1
RETREG2-207ENST00000452293 LAMB4A4D0S4 1761 aa34.39■■■■□ 3.1
RETREG2-207ENST00000452293 ZPR1O75312 459 aa34.38■■■■□ 3.09
RETREG2-207ENST00000452293 GPR162Q16538 588 aa34.38■■■■□ 3.09
RETREG2-207ENST00000452293 TEX13AQ9BXU3 409 aaPredicted RBP34.38■■■■□ 3.09
RETREG2-207ENST00000452293 CD2APQ9Y5K6 639 aa34.38■■■■□ 3.09
RETREG2-207ENST00000452293 CHD4Q14839 1912 aa34.38■■■■□ 3.09
RETREG2-207ENST00000452293 AFDNP55196 1824 aaKnown RBP34.37■■■■□ 3.09
RETREG2-207ENST00000452293 RUNDC1Q96C34 613 aa34.37■■■■□ 3.09
RETREG2-207ENST00000452293 KIAA1551Q9HCM1 1747 aa34.37■■■■□ 3.09
RETREG2-207ENST00000452293 EIF5P55010 431 aaKnown RBP34.35■■■■□ 3.09
RETREG2-207ENST00000452293 DDR1Q08345 913 aa34.35■■■■□ 3.09
RETREG2-207ENST00000452293 SNRPA1P09661 255 aaKnown RBP34.34■■■■□ 3.09
RETREG2-207ENST00000452293 NARFQ9UHQ1 456 aa34.34■■■■□ 3.09
RETREG2-207ENST00000452293 PARP3Q9Y6F1 533 aa34.34■■■■□ 3.09
RETREG2-207ENST00000452293 SCN7AQ01118 1682 aa34.34■■■■□ 3.09
RETREG2-207ENST00000452293 BCL2L12Q9HB09 334 aa34.33■■■■□ 3.09
RETREG2-207ENST00000452293 YBX3P16989 372 aaKnown RBP eCLIP34.31■■■■□ 3.08
RETREG2-207ENST00000452293 PNISRQ8TF01 805 aaKnown RBP34.31■■■■□ 3.08
RETREG2-207ENST00000452293 TBC1D2BQ9UPU7 963 aa34.31■■■■□ 3.08
RETREG2-207ENST00000452293 BCORQ6W2J9 1755 aa34.3■■■■□ 3.08
RETREG2-207ENST00000452293 C10orf71Q711Q0 1435 aa34.3■■■■□ 3.08
RETREG2-207ENST00000452293 EIF4A1P60842 406 aaKnown RBP34.28■■■■□ 3.08
RETREG2-207ENST00000452293 TRIM35Q9UPQ4 493 aa34.28■■■■□ 3.08
RETREG2-207ENST00000452293 ANP32CO43423 234 aa34.27■■■■□ 3.08
RETREG2-207ENST00000452293 YY1P25490 414 aa34.27■■■■□ 3.08
RETREG2-207ENST00000452293 IL6STP40189 918 aaPredicted RBP34.27■■■■□ 3.08
RETREG2-207ENST00000452293 LMOD3Q0VAK6 560 aa34.27■■■■□ 3.08
RETREG2-207ENST00000452293 TSPYL4Q9UJ04 414 aa34.27■■■■□ 3.08
RETREG2-207ENST00000452293 GOLGB1Q14789 3259 aaKnown RBP34.26■■■■□ 3.08
RETREG2-207ENST00000452293 SENP3-EIF4A1A0A087X0R7 540 aa34.26■■■■□ 3.08
RETREG2-207ENST00000452293 POLRMTO00411 1230 aaKnown RBP34.26■■■■□ 3.08
RETREG2-207ENST00000452293 TM4SF1P30408 202 aa34.26■■■■□ 3.08
RETREG2-207ENST00000452293 NFIXQ14938 502 aa34.26■■■■□ 3.08
RETREG2-207ENST00000452293 BICDL1Q6ZP65 573 aa34.26■■■■□ 3.08
RETREG2-207ENST00000452293 PXDNLA1KZ92 1463 aa34.26■■■■□ 3.07
RETREG2-207ENST00000452293 A0A087WZG4 1122 aa34.25■■■■□ 3.07
RETREG2-207ENST00000452293 UTRNP46939 3433 aa34.24■■■■□ 3.07
RETREG2-207ENST00000452293 NBPF26B4DH59 902 aa34.24■■■■□ 3.07
RETREG2-207ENST00000452293 NBPF10Q6P3W6 841 aaKnown RBP34.24■■■■□ 3.07
RETREG2-207ENST00000452293 NBPF15Q8N660 670 aa34.24■■■■□ 3.07
RETREG2-207ENST00000452293 APAF1O14727 1248 aa34.23■■■■□ 3.07
RETREG2-207ENST00000452293 GIGYF1O75420 1035 aaPredicted RBP34.23■■■■□ 3.07
RETREG2-207ENST00000452293 BRCA1P38398 1863 aaKnown RBP34.22■■■■□ 3.07
RETREG2-207ENST00000452293 NRXN2Q9P2S2 1712 aa34.22■■■■□ 3.07
RETREG2-207ENST00000452293 A0A0G2JLW4 131 aa34.22■■■■□ 3.07
RETREG2-207ENST00000452293 LAS1LQ9Y4W2 734 aaKnown RBP34.22■■■■□ 3.07
RETREG2-207ENST00000452293 DZIP3Q86Y13 1208 aaKnown RBP34.21■■■■□ 3.07
RETREG2-207ENST00000452293 TBC1D9BQ66K14 1250 aa34.2■■■■□ 3.07
RETREG2-207ENST00000452293 NPM2Q86SE8 214 aaKnown RBP34.2■■■■□ 3.07
RETREG2-207ENST00000452293 CAMTA2O94983 1202 aa34.19■■■■□ 3.06
RETREG2-207ENST00000452293 MRS2Q9HD23 443 aa34.19■■■■□ 3.06
RETREG2-207ENST00000452293 DPEP1P16444 411 aa34.18■■■■□ 3.06
RETREG2-207ENST00000452293 NGEFQ8N5V2 710 aa34.17■■■■□ 3.06
RETREG2-207ENST00000452293 SERPINB2P05120 415 aa34.16■■■■□ 3.06
RETREG2-207ENST00000452293 KRT24Q2M2I5 525 aa34.15■■■■□ 3.06
RETREG2-207ENST00000452293 ANKRD31Q8N7Z5 1873 aa34.15■■■■□ 3.06
RETREG2-207ENST00000452293 CARMIL3Q8ND23 1372 aa34.13■■■■□ 3.05
RETREG2-207ENST00000452293 TGFB2P61812 414 aa34.13■■■■□ 3.05
RETREG2-207ENST00000452293 NUP98P52948 1817 aa34.13■■■■□ 3.05
RETREG2-207ENST00000452293 MYL6BP14649 208 aa34.12■■■■□ 3.05
RETREG2-207ENST00000452293 CHRNA5P30532 468 aa34.12■■■■□ 3.05
RETREG2-207ENST00000452293 CCDC24Q8N4L8 307 aa34.12■■■■□ 3.05
RETREG2-207ENST00000452293 EIF2S2P20042 333 aaKnown RBP34.11■■■■□ 3.05
RETREG2-207ENST00000452293 CHL1O00533 1208 aa34.1■■■■□ 3.05
RETREG2-207ENST00000452293 GRIN3BO60391 1043 aa34.1■■■■□ 3.05
RETREG2-207ENST00000452293 NECTIN2Q92692 538 aa34.1■■■■□ 3.05
RETREG2-207ENST00000452293 KCNA3P22001 575 aa34.09■■■■□ 3.05
RETREG2-207ENST00000452293 BCS1LQ9Y276 419 aa34.09■■■■□ 3.05
RETREG2-207ENST00000452293 BABAM1Q9NWV8 329 aa34.08■■■■□ 3.05
RETREG2-207ENST00000452293 ARFGEF1Q9Y6D6 1849 aa34.07■■■■□ 3.04
RETREG2-207ENST00000452293 ANXA1P04083 346 aa34.07■■■■□ 3.04
RETREG2-207ENST00000452293 DLEC1Q9Y238 1755 aa34.07■■■■□ 3.04
RETREG2-207ENST00000452293 TTLL7Q6ZT98 887 aa34.06■■■■□ 3.04
RETREG2-207ENST00000452293 HLFQ16534 295 aa34.05■■■■□ 3.04
RETREG2-207ENST00000452293 CACNA1SQ13698 1873 aa34.04■■■■□ 3.04
RETREG2-207ENST00000452293 SETDB2Q96T68 719 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms