RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 AKT1S1Q96B36 256 aa31.2■■■□□ 2.59
CPSF4-207ENST00000451876 CNTNAP4Q9C0A0 1308 aa31.2■■■□□ 2.58
CPSF4-207ENST00000451876 TEX13AQ9BXU3 409 aaPredicted RBP31.2■■■□□ 2.58
CPSF4-207ENST00000451876 QSER1Q2KHR3 1735 aa31.19■■■□□ 2.58
CPSF4-207ENST00000451876 ELL2O00472 640 aaPredicted RBP31.19■■■□□ 2.58
CPSF4-207ENST00000451876 TSPYL6Q8N831 410 aa31.19■■■□□ 2.58
CPSF4-207ENST00000451876 DUSP27Q5VZP5 1158 aa31.18■■■□□ 2.58
CPSF4-207ENST00000451876 AMIGO3Q86WK7 504 aa31.18■■■□□ 2.58
CPSF4-207ENST00000451876 STARD3NLO95772 234 aa31.17■■■□□ 2.58
CPSF4-207ENST00000451876 EXOSC9Q06265 439 aaKnown RBP31.16■■■□□ 2.58
CPSF4-207ENST00000451876 SLC15A2Q16348 729 aa31.16■■■□□ 2.58
CPSF4-207ENST00000451876 INTS5Q6P9B9 1019 aaKnown RBP31.16■■■□□ 2.58
CPSF4-207ENST00000451876 TRMT2AQ8IZ69 625 aaKnown RBP31.16■■■□□ 2.58
CPSF4-207ENST00000451876 AK7Q96M32 723 aa31.16■■■□□ 2.58
CPSF4-207ENST00000451876 ZBTB1Q9Y2K1 713 aa31.16■■■□□ 2.58
CPSF4-207ENST00000451876 CCDC87Q9NVE4 849 aa31.16■■■□□ 2.58
CPSF4-207ENST00000451876 STK32BQ9NY57 414 aa31.16■■■□□ 2.58
CPSF4-207ENST00000451876 NBPF14Q5TI25 921 aa31.15■■■□□ 2.58
CPSF4-207ENST00000451876 SMIM5Q71RC9 77 aa31.15■■■□□ 2.58
CPSF4-207ENST00000451876 GNPATO15228 680 aa31.14■■■□□ 2.58
CPSF4-207ENST00000451876 A1BGP04217 495 aa31.14■■■□□ 2.58
CPSF4-207ENST00000451876 RC3H1Q5TC82 1133 aaKnown RBP31.14■■■□□ 2.58
CPSF4-207ENST00000451876 C4AP0C0L4 1744 aa31.14■■■□□ 2.58
CPSF4-207ENST00000451876 EIF2S2P20042 333 aaKnown RBP31.13■■■□□ 2.57
CPSF4-207ENST00000451876 PIP4K2AP48426 406 aaPredicted RBP31.13■■■□□ 2.57
CPSF4-207ENST00000451876 HOXB7P09629 217 aa31.13■■■□□ 2.57
CPSF4-207ENST00000451876 HMGB2P26583 209 aaKnown RBP31.13■■■□□ 2.57
CPSF4-207ENST00000451876 NECTIN2Q92692 538 aa31.13■■■□□ 2.57
CPSF4-207ENST00000451876 TWISTNBQ3B726 338 aaPredicted RBP31.12■■■□□ 2.57
CPSF4-207ENST00000451876 TFCP2L1Q9NZI6 479 aa31.12■■■□□ 2.57
CPSF4-207ENST00000451876 CANXP27824 592 aaKnown RBP31.1■■■□□ 2.57
CPSF4-207ENST00000451876 NBPF26B4DH59 902 aa31.09■■■□□ 2.57
CPSF4-207ENST00000451876 R3HDM1Q15032 1099 aaKnown RBP31.09■■■□□ 2.57
CPSF4-207ENST00000451876 HDGFL1Q5TGJ6 251 aa31.09■■■□□ 2.57
CPSF4-207ENST00000451876 NBPF10Q6P3W6 841 aaKnown RBP31.09■■■□□ 2.57
CPSF4-207ENST00000451876 NBPF15Q8N660 670 aa31.09■■■□□ 2.57
CPSF4-207ENST00000451876 RPS6KA4O75676 772 aa31.09■■■□□ 2.57
CPSF4-207ENST00000451876 PHF14O94880 888 aa31.09■■■□□ 2.57
CPSF4-207ENST00000451876 PNPLA7Q6ZV29 1317 aa31.08■■■□□ 2.57
CPSF4-207ENST00000451876 CASZ1Q86V15 1759 aa31.08■■■□□ 2.57
CPSF4-207ENST00000451876 RTCBQ9Y3I0 505 aaKnown RBP31.08■■■□□ 2.57
CPSF4-207ENST00000451876 SOS1Q07889 1333 aaPredicted RBP31.08■■■□□ 2.57
CPSF4-207ENST00000451876 PSDA5PKW4 1024 aaPredicted RBP31.07■■■□□ 2.56
CPSF4-207ENST00000451876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.06■■■□□ 2.56
CPSF4-207ENST00000451876 VAMP4O75379 141 aa31.06■■■□□ 2.56
CPSF4-207ENST00000451876 PDGFDQ9GZP0 370 aaPredicted RBP31.06■■■□□ 2.56
CPSF4-207ENST00000451876 SSFA2P28290 1259 aa31.05■■■□□ 2.56
CPSF4-207ENST00000451876 PDIA6Q15084 440 aa31.05■■■□□ 2.56
CPSF4-207ENST00000451876 PROSER3Q2NL68 480 aa31.05■■■□□ 2.56
CPSF4-207ENST00000451876 COL15A1P39059 1388 aa31.04■■■□□ 2.56
CPSF4-207ENST00000451876 ANXA1P04083 346 aa31.04■■■□□ 2.56
CPSF4-207ENST00000451876 CHPF2Q9P2E5 772 aa31.04■■■□□ 2.56
CPSF4-207ENST00000451876 EIF5P55010 431 aaKnown RBP31.03■■■□□ 2.56
CPSF4-207ENST00000451876 ZNF330Q9Y3S2 320 aaPredicted RBP31.03■■■□□ 2.56
CPSF4-207ENST00000451876 ERBB4Q15303 1308 aa31.03■■■□□ 2.56
CPSF4-207ENST00000451876 MYL6BP14649 208 aa31.02■■■□□ 2.56
CPSF4-207ENST00000451876 IL6STP40189 918 aaPredicted RBP31.02■■■□□ 2.56
CPSF4-207ENST00000451876 COL23A1Q86Y22 540 aaPredicted RBP31.02■■■□□ 2.56
CPSF4-207ENST00000451876 TCERG1O14776 1098 aaKnown RBP31.01■■■□□ 2.55
CPSF4-207ENST00000451876 LRP10Q7Z4F1 713 aa31.01■■■□□ 2.55
CPSF4-207ENST00000451876 ARHGEF1Q92888 912 aaKnown RBP31■■■□□ 2.55
CPSF4-207ENST00000451876 TRAPPC3LQ5T215 181 aa30.99■■■□□ 2.55
CPSF4-207ENST00000451876 BCORQ6W2J9 1755 aa30.99■■■□□ 2.55
CPSF4-207ENST00000451876 SCN7AQ01118 1682 aa30.99■■■□□ 2.55
CPSF4-207ENST00000451876 CACNA1FO60840 1977 aa30.99■■■□□ 2.55
CPSF4-207ENST00000451876 ADRA2BP18089 450 aa30.98■■■□□ 2.55
CPSF4-207ENST00000451876 CCDC30Q5VVM6 783 aa30.98■■■□□ 2.55
CPSF4-207ENST00000451876 DDX21Q9NR30 783 aaKnown RBP eCLIP30.98■■■□□ 2.55
CPSF4-207ENST00000451876 DBF4Q9UBU7 674 aaPredicted RBP30.98■■■□□ 2.55
CPSF4-207ENST00000451876 FLAD1Q8NFF5 587 aa30.97■■■□□ 2.55
CPSF4-207ENST00000451876 MSH5O43196 834 aa30.96■■■□□ 2.55
CPSF4-207ENST00000451876 RFC4P35249 363 aa30.94■■■□□ 2.54
CPSF4-207ENST00000451876 SRP68Q9UHB9 627 aaKnown RBP30.94■■■□□ 2.54
CPSF4-207ENST00000451876 TBC1D2BQ9UPU7 963 aa30.94■■■□□ 2.54
CPSF4-207ENST00000451876 USP42Q9H9J4 1324 aaKnown RBP30.93■■■□□ 2.54
CPSF4-207ENST00000451876 STK31Q9BXU1 1019 aa30.92■■■□□ 2.54
CPSF4-207ENST00000451876 CHMP4AQ9BY43 222 aa30.92■■■□□ 2.54
CPSF4-207ENST00000451876 TTLL7Q6ZT98 887 aa30.91■■■□□ 2.54
CPSF4-207ENST00000451876 NPM2Q86SE8 214 aaKnown RBP30.91■■■□□ 2.54
CPSF4-207ENST00000451876 DZIP3Q86Y13 1208 aaKnown RBP30.91■■■□□ 2.54
CPSF4-207ENST00000451876 ARXQ96QS3 562 aa30.91■■■□□ 2.54
CPSF4-207ENST00000451876 PHAXQ9H814 394 aaKnown RBP30.91■■■□□ 2.54
CPSF4-207ENST00000451876 HYPKQ9NX55 129 aa30.91■■■□□ 2.54
CPSF4-207ENST00000451876 NUP98P52948 1817 aa30.9■■■□□ 2.54
CPSF4-207ENST00000451876 SLC4A2P04920 1241 aa30.9■■■□□ 2.54
CPSF4-207ENST00000451876 CT47B1P0C2W7 299 aaPredicted RBP30.9■■■□□ 2.54
CPSF4-207ENST00000451876 COPS6Q7L5N1 327 aa30.9■■■□□ 2.54
CPSF4-207ENST00000451876 XAGE3Q8WTP9 111 aa30.9■■■□□ 2.54
CPSF4-207ENST00000451876 NARFQ9UHQ1 456 aa30.9■■■□□ 2.54
CPSF4-207ENST00000451876 A0A087WZG4 1122 aa30.89■■■□□ 2.54
CPSF4-207ENST00000451876 AIMP1Q12904 312 aaKnown RBP30.89■■■□□ 2.54
CPSF4-207ENST00000451876 USPL1Q5W0Q7 1092 aa30.89■■■□□ 2.54
CPSF4-207ENST00000451876 COL24A1Q17RW2 1714 aa30.89■■■□□ 2.54
CPSF4-207ENST00000451876 ARFGEF2Q9Y6D5 1785 aa30.89■■■□□ 2.53
CPSF4-207ENST00000451876 CAMTA2O94983 1202 aa30.87■■■□□ 2.53
CPSF4-207ENST00000451876 G2E3Q7L622 706 aa30.87■■■□□ 2.53
CPSF4-207ENST00000451876 SSH1Q8WYL5 1049 aa30.87■■■□□ 2.53
CPSF4-207ENST00000451876 BCL2L13Q9BXK5 485 aa30.87■■■□□ 2.53
CPSF4-207ENST00000451876 GYS1P13807 737 aa30.87■■■□□ 2.53
CPSF4-207ENST00000451876 ZNF428Q96B54 188 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms