RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 INTS5Q6P9B9 1019 aaKnown RBP15.62■□□□□ 0.09
RFC4-208ENST00000447345 PPP1R1BQ9UD71 204 aaPredicted RBP15.62■□□□□ 0.09
RFC4-208ENST00000447345 ZBTB1Q9Y2K1 713 aa15.62■□□□□ 0.09
RFC4-208ENST00000447345 SCN7AQ01118 1682 aa15.62■□□□□ 0.09
RFC4-208ENST00000447345 BCORQ6W2J9 1755 aa15.62■□□□□ 0.09
RFC4-208ENST00000447345 RPS6KA4O75676 772 aa15.61■□□□□ 0.09
RFC4-208ENST00000447345 CANXP27824 592 aaKnown RBP15.61■□□□□ 0.09
RFC4-208ENST00000447345 PTGER2P43116 358 aa15.61■□□□□ 0.09
RFC4-208ENST00000447345 TRAPPC3LQ5T215 181 aa15.61■□□□□ 0.09
RFC4-208ENST00000447345 ZNF330Q9Y3S2 320 aaPredicted RBP15.61■□□□□ 0.09
RFC4-208ENST00000447345 STARD3NLO95772 234 aa15.6■□□□□ 0.09
RFC4-208ENST00000447345 SLC16A10Q8TF71 515 aa15.6■□□□□ 0.09
RFC4-208ENST00000447345 COL15A1P39059 1388 aa15.6■□□□□ 0.09
RFC4-208ENST00000447345 SNRPA1P09661 255 aaKnown RBP15.59■□□□□ 0.09
RFC4-208ENST00000447345 PIP4K2AP48426 406 aaPredicted RBP15.59■□□□□ 0.09
RFC4-208ENST00000447345 ARHGEF1Q92888 912 aaKnown RBP15.59■□□□□ 0.09
RFC4-208ENST00000447345 SALL2Q9Y467 1007 aaPredicted RBP15.59■□□□□ 0.09
RFC4-208ENST00000447345 SOS1Q07889 1333 aaPredicted RBP15.59■□□□□ 0.09
RFC4-208ENST00000447345 POLD1P28340 1107 aa15.58■□□□□ 0.08
RFC4-208ENST00000447345 RFC4P35249 363 aa15.58■□□□□ 0.08
RFC4-208ENST00000447345 EIF4A1P60842 406 aaKnown RBP15.58■□□□□ 0.08
RFC4-208ENST00000447345 KLHL34Q8N239 644 aa15.58■□□□□ 0.08
RFC4-208ENST00000447345 TEX13AQ9BXU3 409 aaPredicted RBP15.58■□□□□ 0.08
RFC4-208ENST00000447345 SRP68Q9UHB9 627 aaKnown RBP15.58■□□□□ 0.08
RFC4-208ENST00000447345 USP16Q9Y5T5 823 aa15.58■□□□□ 0.08
RFC4-208ENST00000447345 A1BGP04217 495 aa15.57■□□□□ 0.08
RFC4-208ENST00000447345 ADRA2BP18089 450 aa15.57■□□□□ 0.08
RFC4-208ENST00000447345 SGIP1Q9BQI5 828 aa15.57■□□□□ 0.08
RFC4-208ENST00000447345 AFDNP55196 1824 aaKnown RBP15.57■□□□□ 0.08
RFC4-208ENST00000447345 MIER1Q8N108 512 aa15.56■□□□□ 0.08
RFC4-208ENST00000447345 USP42Q9H9J4 1324 aaKnown RBP15.55■□□□□ 0.08
RFC4-208ENST00000447345 CCER2I3L3R5 266 aa15.55■□□□□ 0.08
RFC4-208ENST00000447345 GIGYF1O75420 1035 aaPredicted RBP15.55■□□□□ 0.08
RFC4-208ENST00000447345 KRT24Q2M2I5 525 aa15.55■□□□□ 0.08
RFC4-208ENST00000447345 ARXQ96QS3 562 aa15.55■□□□□ 0.08
RFC4-208ENST00000447345 CHL1O00533 1208 aa15.54■□□□□ 0.08
RFC4-208ENST00000447345 CALD1Q05682 793 aaKnown RBP15.54■□□□□ 0.08
RFC4-208ENST00000447345 MBIPQ9NS73 344 aa15.54■□□□□ 0.08
RFC4-208ENST00000447345 BABAM1Q9NWV8 329 aa15.54■□□□□ 0.08
RFC4-208ENST00000447345 NUP98P52948 1817 aa15.53■□□□□ 0.08
RFC4-208ENST00000447345 GYS1P13807 737 aa15.53■□□□□ 0.08
RFC4-208ENST00000447345 USPL1Q5W0Q7 1092 aa15.53■□□□□ 0.08
RFC4-208ENST00000447345 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
RFC4-208ENST00000447345 IFT57Q9NWB7 429 aa15.53■□□□□ 0.08
RFC4-208ENST00000447345 KIF13BQ9NQT8 1826 aa15.52■□□□□ 0.08
RFC4-208ENST00000447345 ZPR1O75312 459 aa15.52■□□□□ 0.08
RFC4-208ENST00000447345 MMP10P09238 476 aa15.52■□□□□ 0.08
RFC4-208ENST00000447345 EIF2S2P20042 333 aaKnown RBP15.52■□□□□ 0.08
RFC4-208ENST00000447345 IL6STP40189 918 aaPredicted RBP15.52■□□□□ 0.08
RFC4-208ENST00000447345 EIF5P55010 431 aaKnown RBP15.52■□□□□ 0.08
RFC4-208ENST00000447345 NPM2Q86SE8 214 aaKnown RBP15.52■□□□□ 0.08
RFC4-208ENST00000447345 WWC1Q8IX03 1113 aa15.52■□□□□ 0.08
RFC4-208ENST00000447345 NECTIN2Q92692 538 aa15.52■□□□□ 0.08
RFC4-208ENST00000447345 FHDC1Q9C0D6 1143 aaPredicted RBP15.52■□□□□ 0.08
RFC4-208ENST00000447345 TBC1D2BQ9UPU7 963 aa15.52■□□□□ 0.08
RFC4-208ENST00000447345 N4BP2Q86UW6 1770 aaPredicted RBP15.52■□□□□ 0.07
RFC4-208ENST00000447345 NBPF26B4DH59 902 aa15.51■□□□□ 0.07
RFC4-208ENST00000447345 GNAI1P63096 354 aa15.51■□□□□ 0.07
RFC4-208ENST00000447345 FKBP8Q14318 412 aa15.51■□□□□ 0.07
RFC4-208ENST00000447345 CCDC27Q2M243 656 aa15.51■□□□□ 0.07
RFC4-208ENST00000447345 NBPF10Q6P3W6 841 aaKnown RBP15.51■□□□□ 0.07
RFC4-208ENST00000447345 NBPF15Q8N660 670 aa15.51■□□□□ 0.07
RFC4-208ENST00000447345 TSR2Q969E8 191 aaKnown RBP15.51■□□□□ 0.07
RFC4-208ENST00000447345 NARFQ9UHQ1 456 aa15.51■□□□□ 0.07
RFC4-208ENST00000447345 ZNF853P0CG23 659 aa15.5■□□□□ 0.07
RFC4-208ENST00000447345 MYL6BP14649 208 aa15.5■□□□□ 0.07
RFC4-208ENST00000447345 NGEFQ8N5V2 710 aa15.5■□□□□ 0.07
RFC4-208ENST00000447345 ANKRD36CQ5JPF3 1778 aa15.49■□□□□ 0.07
RFC4-208ENST00000447345 KIAA1551Q9HCM1 1747 aa15.49■□□□□ 0.07
RFC4-208ENST00000447345 A0A087WZG4 1122 aa15.49■□□□□ 0.07
RFC4-208ENST00000447345 DZIP3Q86Y13 1208 aaKnown RBP15.49■□□□□ 0.07
RFC4-208ENST00000447345 NLGN1Q8N2Q7 840 aa15.49■□□□□ 0.07
RFC4-208ENST00000447345 NRXN2Q9P2S2 1712 aa15.48■□□□□ 0.07
RFC4-208ENST00000447345 ANXA1P04083 346 aa15.48■□□□□ 0.07
RFC4-208ENST00000447345 BCL2L12Q9HB09 334 aa15.48■□□□□ 0.07
RFC4-208ENST00000447345 ELL2O00472 640 aaPredicted RBP15.47■□□□□ 0.07
RFC4-208ENST00000447345 DDR1Q08345 913 aa15.47■□□□□ 0.07
RFC4-208ENST00000447345 DUSP27Q5VZP5 1158 aa15.47■□□□□ 0.07
RFC4-208ENST00000447345 BICDL1Q6ZP65 573 aa15.47■□□□□ 0.07
RFC4-208ENST00000447345 SYT17Q9BSW7 474 aa15.47■□□□□ 0.07
RFC4-208ENST00000447345 PARP3Q9Y6F1 533 aa15.47■□□□□ 0.07
RFC4-208ENST00000447345 ARFGEF2Q9Y6D5 1785 aa15.47■□□□□ 0.07
RFC4-208ENST00000447345 ANKRD31Q8N7Z5 1873 aa15.46■□□□□ 0.07
RFC4-208ENST00000447345 PROSER3Q2NL68 480 aa15.46■□□□□ 0.07
RFC4-208ENST00000447345 HDGFL1Q5TGJ6 251 aa15.46■□□□□ 0.07
RFC4-208ENST00000447345 NLGN2Q8NFZ4 835 aa15.46■□□□□ 0.07
RFC4-208ENST00000447345 CACNA1SQ13698 1873 aa15.46■□□□□ 0.06
RFC4-208ENST00000447345 IL16Q14005 1332 aa15.45■□□□□ 0.06
RFC4-208ENST00000447345 FANCIQ9NVI1 1328 aa15.45■□□□□ 0.06
RFC4-208ENST00000447345 C10orf71Q711Q0 1435 aa15.45■□□□□ 0.06
RFC4-208ENST00000447345 CAMTA2O94983 1202 aa15.45■□□□□ 0.06
RFC4-208ENST00000447345 NFIXQ14938 502 aa15.45■□□□□ 0.06
RFC4-208ENST00000447345 NCBP3Q53F19 620 aaKnown RBP15.45■□□□□ 0.06
RFC4-208ENST00000447345 C8orf58Q8NAV2 365 aa15.45■□□□□ 0.06
RFC4-208ENST00000447345 CHPF2Q9P2E5 772 aa15.45■□□□□ 0.06
RFC4-208ENST00000447345 BRCA1P38398 1863 aaKnown RBP15.45■□□□□ 0.06
RFC4-208ENST00000447345 ERBB4Q15303 1308 aa15.44■□□□□ 0.06
RFC4-208ENST00000447345 TBC1D9BQ66K14 1250 aa15.44■□□□□ 0.06
RFC4-208ENST00000447345 KIF6Q6ZMV9 814 aa15.44■□□□□ 0.06
RFC4-208ENST00000447345 TTLL7Q6ZT98 887 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms