RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 SHISA8B8ZZ34 492 aa8.61□□□□□ -1.03
LINC00440-201ENST00000446579 EML3Q32P44 896 aa8.61□□□□□ -1.03
LINC00440-201ENST00000446579 PPARGC1BQ86YN6 1023 aaKnown RBP8.61□□□□□ -1.03
LINC00440-201ENST00000446579 EDARADDQ8WWZ3 215 aa8.61□□□□□ -1.03
LINC00440-201ENST00000446579 AIDAQ96BJ3 306 aa8.61□□□□□ -1.03
LINC00440-201ENST00000446579 ATXN7L1Q9ULK2 861 aaPredicted RBP8.61□□□□□ -1.03
LINC00440-201ENST00000446579 C1orf229Q6ZS94 237 aaPredicted RBP8.6□□□□□ -1.03
LINC00440-201ENST00000446579 TBC1D9Q6ZT07 1266 aa8.6□□□□□ -1.03
LINC00440-201ENST00000446579 GOLGA6L1Q8N7Z2 621 aa8.6□□□□□ -1.03
LINC00440-201ENST00000446579 SPOCK3Q9BQ16 436 aa8.6□□□□□ -1.03
LINC00440-201ENST00000446579 MKL2Q9ULH7 1088 aa8.6□□□□□ -1.03
LINC00440-201ENST00000446579 FGFR3P22607 806 aa8.59□□□□□ -1.03
LINC00440-201ENST00000446579 GDF10P55107 478 aa8.59□□□□□ -1.03
LINC00440-201ENST00000446579 UBAP2LQ14157 1087 aaKnown RBP8.59□□□□□ -1.03
LINC00440-201ENST00000446579 GLMNQ92990 594 aa8.59□□□□□ -1.03
LINC00440-201ENST00000446579 NOD1Q9Y239 953 aa8.59□□□□□ -1.03
LINC00440-201ENST00000446579 USP17L5A8MUK1 530 aa8.58□□□□□ -1.04
LINC00440-201ENST00000446579 BNIP3LO60238 219 aa8.58□□□□□ -1.04
LINC00440-201ENST00000446579 CTBSQ01459 385 aa8.58□□□□□ -1.04
LINC00440-201ENST00000446579 TRAIPQ9BWF2 469 aa8.58□□□□□ -1.04
LINC00440-201ENST00000446579 C2CD2LO14523 706 aa8.57□□□□□ -1.04
LINC00440-201ENST00000446579 ATP9BO43861 1147 aa8.57□□□□□ -1.04
LINC00440-201ENST00000446579 INHAP05111 366 aa8.57□□□□□ -1.04
LINC00440-201ENST00000446579 NCOA4Q13772 614 aa8.57□□□□□ -1.04
LINC00440-201ENST00000446579 PLEKHM2Q8IWE5 1019 aa8.57□□□□□ -1.04
LINC00440-201ENST00000446579 CALR3Q96L12 384 aaKnown RBP8.57□□□□□ -1.04
LINC00440-201ENST00000446579 UCN2Q96RP3 112 aa8.57□□□□□ -1.04
LINC00440-201ENST00000446579 NIFKQ9BYG3 293 aaKnown RBP8.57□□□□□ -1.04
LINC00440-201ENST00000446579 SERTAD1Q9UHV2 236 aa8.57□□□□□ -1.04
LINC00440-201ENST00000446579 GGA1Q9UJY5 639 aa8.57□□□□□ -1.04
LINC00440-201ENST00000446579 ITGB2P05107 769 aa8.56□□□□□ -1.04
LINC00440-201ENST00000446579 SCNN1DP51172 638 aa8.56□□□□□ -1.04
LINC00440-201ENST00000446579 ARSJQ5FYB0 599 aaPredicted RBP8.56□□□□□ -1.04
LINC00440-201ENST00000446579 FIGNL1Q6PIW4 674 aa8.56□□□□□ -1.04
LINC00440-201ENST00000446579 CRISPLD1Q9H336 500 aa8.56□□□□□ -1.04
LINC00440-201ENST00000446579 GRIN2CQ14957 1233 aa8.55□□□□□ -1.04
LINC00440-201ENST00000446579 TRIM50Q86XT4 487 aa8.55□□□□□ -1.04
LINC00440-201ENST00000446579 ZCCHC2Q9C0B9 1178 aaKnown RBP8.55□□□□□ -1.04
LINC00440-201ENST00000446579 PCDHGA11Q9Y5H2 935 aa8.55□□□□□ -1.04
LINC00440-201ENST00000446579 SMTNP53814 917 aa8.54□□□□□ -1.04
LINC00440-201ENST00000446579 GTF2IP78347 998 aa8.54□□□□□ -1.04
LINC00440-201ENST00000446579 DEPDC4Q8N2C3 294 aa8.54□□□□□ -1.04
LINC00440-201ENST00000446579 NDFIP2Q9NV92 336 aa8.54□□□□□ -1.04
LINC00440-201ENST00000446579 PCDHGC4Q9Y5F7 938 aa8.54□□□□□ -1.04
LINC00440-201ENST00000446579 ZBTB7CA1YPR0 619 aa8.53□□□□□ -1.04
LINC00440-201ENST00000446579 DCDC2BA2VCK2 349 aa8.53□□□□□ -1.04
LINC00440-201ENST00000446579 KRBA1A5PL33 1030 aa8.53□□□□□ -1.04
LINC00440-201ENST00000446579 USP17L3A6NCW0 530 aa8.53□□□□□ -1.04
LINC00440-201ENST00000446579 USP17L4A6NCW7 530 aa8.53□□□□□ -1.04
LINC00440-201ENST00000446579 NEURL1BA8MQ27 555 aa8.53□□□□□ -1.04
LINC00440-201ENST00000446579 PROCP04070 461 aa8.53□□□□□ -1.04
LINC00440-201ENST00000446579 NBPF1Q3BBV0 1214 aa8.53□□□□□ -1.04
LINC00440-201ENST00000446579 USP17L2Q6R6M4 530 aa8.53□□□□□ -1.04
LINC00440-201ENST00000446579 SLCO4C1Q6ZQN7 724 aa8.53□□□□□ -1.04
LINC00440-201ENST00000446579 USP17L1Q7RTZ2 530 aa8.53□□□□□ -1.04
LINC00440-201ENST00000446579 TFIP11Q9UBB9 837 aaKnown RBP8.53□□□□□ -1.04
LINC00440-201ENST00000446579 GJA3Q9Y6H8 435 aa8.53□□□□□ -1.04
LINC00440-201ENST00000446579 ATXN7O15265 892 aaPredicted RBP8.52□□□□□ -1.05
LINC00440-201ENST00000446579 ADAM23O75077 832 aa8.52□□□□□ -1.05
LINC00440-201ENST00000446579 PPP1R15AO75807 674 aaPredicted RBP8.52□□□□□ -1.05
LINC00440-201ENST00000446579 TATP17735 454 aaPredicted RBP8.52□□□□□ -1.05
LINC00440-201ENST00000446579 ATP4AP20648 1035 aa8.52□□□□□ -1.05
LINC00440-201ENST00000446579 ATP1A2P50993 1020 aa8.52□□□□□ -1.05
LINC00440-201ENST00000446579 C1orf216Q8TAB5 229 aa8.52□□□□□ -1.05
LINC00440-201ENST00000446579 CABP1Q9NZU7 370 aa8.52□□□□□ -1.05
LINC00440-201ENST00000446579 A0A1W2PNR3 127 aa8.51□□□□□ -1.05
LINC00440-201ENST00000446579 KHNYNO15037 678 aaKnown RBP8.51□□□□□ -1.05
LINC00440-201ENST00000446579 COL8A1P27658 744 aa8.51□□□□□ -1.05
LINC00440-201ENST00000446579 PSME1Q06323 249 aa8.51□□□□□ -1.05
LINC00440-201ENST00000446579 NLRP8Q86W28 1048 aa8.51□□□□□ -1.05
LINC00440-201ENST00000446579 BTBD6Q96KE9 485 aa8.51□□□□□ -1.05
LINC00440-201ENST00000446579 SLC4A9Q96Q91 983 aa8.51□□□□□ -1.05
LINC00440-201ENST00000446579 SUV39H2Q9H5I1 410 aa8.51□□□□□ -1.05
LINC00440-201ENST00000446579 PALM3A6NDB9 673 aaPredicted RBP8.5□□□□□ -1.05
LINC00440-201ENST00000446579 TMEM229AB2RXF0 380 aa8.5□□□□□ -1.05
LINC00440-201ENST00000446579 PIK3R2O00459 728 aa8.5□□□□□ -1.05
LINC00440-201ENST00000446579 BACH1O14867 736 aa8.5□□□□□ -1.05
LINC00440-201ENST00000446579 ARAFP10398 606 aa8.5□□□□□ -1.05
LINC00440-201ENST00000446579 EPXP11678 715 aa8.5□□□□□ -1.05
LINC00440-201ENST00000446579 CD33P20138 364 aa8.5□□□□□ -1.05
LINC00440-201ENST00000446579 PPP1R12CQ9BZL4 782 aa8.5□□□□□ -1.05
LINC00440-201ENST00000446579 DNAAF2Q9NVR5 837 aaKnown RBP8.5□□□□□ -1.05
LINC00440-201ENST00000446579 MKRN1Q9UHC7 482 aaKnown RBP8.5□□□□□ -1.05
LINC00440-201ENST00000446579 A6NJY4 79 aa8.49□□□□□ -1.05
LINC00440-201ENST00000446579 MAPTP10636 758 aaKnown RBP8.49□□□□□ -1.05
LINC00440-201ENST00000446579 BICDL1Q6ZP65 573 aa8.49□□□□□ -1.05
LINC00440-201ENST00000446579 ALYREFQ86V81 257 aaKnown RBP8.49□□□□□ -1.05
LINC00440-201ENST00000446579 MAFBQ9Y5Q3 323 aaPredicted RBP8.49□□□□□ -1.05
LINC00440-201ENST00000446579 GNB5O14775 395 aa8.48□□□□□ -1.05
LINC00440-201ENST00000446579 BAG6P46379 1132 aa8.48□□□□□ -1.05
LINC00440-201ENST00000446579 LINC00114Q6XXX2 140 aa8.48□□□□□ -1.05
LINC00440-201ENST00000446579 LARGE2Q8N3Y3 721 aa8.48□□□□□ -1.05
LINC00440-201ENST00000446579 RETREG2Q8NC44 543 aa8.48□□□□□ -1.05
LINC00440-201ENST00000446579 PRR12Q9ULL5 1215 aa8.48□□□□□ -1.05
LINC00440-201ENST00000446579 PARP3Q9Y6F1 533 aa8.48□□□□□ -1.05
LINC00440-201ENST00000446579 USP3Q9Y6I4 520 aa8.48□□□□□ -1.05
LINC00440-201ENST00000446579 K7ELQ4 463 aaPredicted RBP8.47□□□□□ -1.05
LINC00440-201ENST00000446579 CDK2AP1O14519 115 aa8.47□□□□□ -1.05
LINC00440-201ENST00000446579 ADH6P28332 368 aa8.47□□□□□ -1.05
LINC00440-201ENST00000446579 TNP2Q05952 138 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms