RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 NOS2P35228 1153 aa8.42□□□□□ -1.06
HMGB3P6-201ENST00000444896 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
HMGB3P6-201ENST00000444896 LYSMD3Q7Z3D4 306 aa8.42□□□□□ -1.06
HMGB3P6-201ENST00000444896 STAG2Q8N3U4 1231 aa8.42□□□□□ -1.06
HMGB3P6-201ENST00000444896 CABP1Q9NZU7 370 aa8.42□□□□□ -1.06
HMGB3P6-201ENST00000444896 PARP3Q9Y6F1 533 aa8.42□□□□□ -1.06
HMGB3P6-201ENST00000444896 SOBPA7XYQ1 873 aa8.41□□□□□ -1.06
HMGB3P6-201ENST00000444896 EML1O00423 815 aa8.41□□□□□ -1.06
HMGB3P6-201ENST00000444896 FOXO3O43524 673 aa8.41□□□□□ -1.06
HMGB3P6-201ENST00000444896 PSMA6P60900 246 aaKnown RBP8.41□□□□□ -1.06
HMGB3P6-201ENST00000444896 TXNDC2Q86VQ3 553 aa8.41□□□□□ -1.06
HMGB3P6-201ENST00000444896 NBPF15Q8N660 670 aa8.41□□□□□ -1.06
HMGB3P6-201ENST00000444896 CHMP7Q8WUX9 453 aaPredicted RBP8.41□□□□□ -1.06
HMGB3P6-201ENST00000444896 TRIM47Q96LD4 638 aa8.41□□□□□ -1.06
HMGB3P6-201ENST00000444896 RHOQP17081 205 aa8.4□□□□□ -1.06
HMGB3P6-201ENST00000444896 PHKA2P46019 1235 aa8.4□□□□□ -1.06
HMGB3P6-201ENST00000444896 NBPF10Q6P3W6 841 aaKnown RBP8.4□□□□□ -1.06
HMGB3P6-201ENST00000444896 AEBP1Q8IUX7 1158 aa8.4□□□□□ -1.06
HMGB3P6-201ENST00000444896 L3MBTL2Q969R5 705 aa8.4□□□□□ -1.06
HMGB3P6-201ENST00000444896 NIFKQ9BYG3 293 aaKnown RBP8.4□□□□□ -1.06
HMGB3P6-201ENST00000444896 GNASQ5JWF2 1037 aa8.39□□□□□ -1.07
HMGB3P6-201ENST00000444896 B4GALNT3Q6L9W6 998 aa8.39□□□□□ -1.07
HMGB3P6-201ENST00000444896 MKNK1Q9BUB5 465 aa8.39□□□□□ -1.07
HMGB3P6-201ENST00000444896 SERTM1A2A2V5 107 aa8.38□□□□□ -1.07
HMGB3P6-201ENST00000444896 POTECB2RU33 542 aa8.38□□□□□ -1.07
HMGB3P6-201ENST00000444896 GTF2E1P29083 439 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P6-201ENST00000444896 HIRAP54198 1017 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P6-201ENST00000444896 WDR44Q5JSH3 913 aa8.38□□□□□ -1.07
HMGB3P6-201ENST00000444896 KCTD17Q8N5Z5 321 aa8.38□□□□□ -1.07
HMGB3P6-201ENST00000444896 C7orf43Q8WVR3 580 aa8.38□□□□□ -1.07
HMGB3P6-201ENST00000444896 SEPT3Q9UH03 358 aa8.38□□□□□ -1.07
HMGB3P6-201ENST00000444896 HCN4Q9Y3Q4 1203 aa8.38□□□□□ -1.07
HMGB3P6-201ENST00000444896 SNRPBP14678 240 aaKnown RBP8.37□□□□□ -1.07
HMGB3P6-201ENST00000444896 ARID4AP29374 1257 aaPredicted RBP8.37□□□□□ -1.07
HMGB3P6-201ENST00000444896 TXLNAP40222 546 aa8.37□□□□□ -1.07
HMGB3P6-201ENST00000444896 PLA2G4AP47712 749 aa8.37□□□□□ -1.07
HMGB3P6-201ENST00000444896 KCNA1Q09470 495 aa8.37□□□□□ -1.07
HMGB3P6-201ENST00000444896 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.37□□□□□ -1.07
HMGB3P6-201ENST00000444896 COL26A1Q96A83 441 aa8.37□□□□□ -1.07
HMGB3P6-201ENST00000444896 SENP3-EIF4A1A0A087X0R7 540 aa8.36□□□□□ -1.07
HMGB3P6-201ENST00000444896 TRIM26Q12899 539 aaPredicted RBP8.36□□□□□ -1.07
HMGB3P6-201ENST00000444896 NAA30Q147X3 362 aaPredicted RBP8.36□□□□□ -1.07
HMGB3P6-201ENST00000444896 ZNF232Q9UNY5 417 aa8.36□□□□□ -1.07
HMGB3P6-201ENST00000444896 GNEQ9Y223 722 aaKnown RBP8.36□□□□□ -1.07
HMGB3P6-201ENST00000444896 PTCD1O75127 700 aaKnown RBP8.35□□□□□ -1.07
HMGB3P6-201ENST00000444896 ALDH16A1Q8IZ83 802 aa8.35□□□□□ -1.07
HMGB3P6-201ENST00000444896 SAP130Q9H0E3 1048 aa8.35□□□□□ -1.07
HMGB3P6-201ENST00000444896 QTRT2Q9H974 415 aaKnown RBP8.35□□□□□ -1.07
HMGB3P6-201ENST00000444896 CHMP3Q9Y3E7 222 aa8.35□□□□□ -1.07
HMGB3P6-201ENST00000444896 SERPINB4P48594 390 aa8.34□□□□□ -1.07
HMGB3P6-201ENST00000444896 KLRG1Q96E93 195 aa8.34□□□□□ -1.07
HMGB3P6-201ENST00000444896 PHACTR1Q9C0D0 580 aa8.34□□□□□ -1.07
HMGB3P6-201ENST00000444896 TIMMDC1Q9NPL8 285 aa8.34□□□□□ -1.07
HMGB3P6-201ENST00000444896 LRFN2Q9ULH4 789 aa8.34□□□□□ -1.07
HMGB3P6-201ENST00000444896 IVNS1ABPQ9Y6Y0 642 aa8.34□□□□□ -1.07
HMGB3P6-201ENST00000444896 SLC35F4A4IF30 521 aa8.33□□□□□ -1.08
HMGB3P6-201ENST00000444896 COX20Q5RI15 118 aa8.33□□□□□ -1.08
HMGB3P6-201ENST00000444896 C1orf53Q5VUE5 145 aa8.33□□□□□ -1.08
HMGB3P6-201ENST00000444896 VTI1AQ96AJ9 217 aa8.33□□□□□ -1.08
HMGB3P6-201ENST00000444896 AIDAQ96BJ3 306 aa8.33□□□□□ -1.08
HMGB3P6-201ENST00000444896 NGLY1Q96IV0 654 aa8.33□□□□□ -1.08
HMGB3P6-201ENST00000444896 ZDHHC3Q9NYG2 299 aa8.33□□□□□ -1.08
HMGB3P6-201ENST00000444896 ATP4AP20648 1035 aa8.32□□□□□ -1.08
HMGB3P6-201ENST00000444896 MSX1P28360 303 aa8.32□□□□□ -1.08
HMGB3P6-201ENST00000444896 PTSQ03393 145 aa8.32□□□□□ -1.08
HMGB3P6-201ENST00000444896 CCER1Q8TC90 406 aaPredicted RBP8.32□□□□□ -1.08
HMGB3P6-201ENST00000444896 GTF3C2Q8WUA4 911 aaPredicted RBP8.32□□□□□ -1.08
HMGB3P6-201ENST00000444896 MYO19Q96H55 970 aa8.32□□□□□ -1.08
HMGB3P6-201ENST00000444896 DYRK1BQ9Y463 629 aa8.32□□□□□ -1.08
HMGB3P6-201ENST00000444896 DNMT3AQ9Y6K1 912 aaPredicted RBP8.32□□□□□ -1.08
HMGB3P6-201ENST00000444896 A0A1B0GTH6 734 aa8.31□□□□□ -1.08
HMGB3P6-201ENST00000444896 C16orf46Q6P387 395 aa8.31□□□□□ -1.08
HMGB3P6-201ENST00000444896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.31□□□□□ -1.08
HMGB3P6-201ENST00000444896 PATL2C9JE40 543 aaKnown RBP8.3□□□□□ -1.08
HMGB3P6-201ENST00000444896 NBPF1Q3BBV0 1214 aa8.3□□□□□ -1.08
HMGB3P6-201ENST00000444896 SLC16A10Q8TF71 515 aa8.3□□□□□ -1.08
HMGB3P6-201ENST00000444896 ZIC5Q96T25 663 aa8.3□□□□□ -1.08
HMGB3P6-201ENST00000444896 TNFRSF10BO14763 440 aa8.29□□□□□ -1.08
HMGB3P6-201ENST00000444896 F11P03951 625 aa8.29□□□□□ -1.08
HMGB3P6-201ENST00000444896 MTMR3Q13615 1198 aa8.29□□□□□ -1.08
HMGB3P6-201ENST00000444896 ECM1Q16610 540 aa8.29□□□□□ -1.08
HMGB3P6-201ENST00000444896 RTN1Q16799 776 aa8.29□□□□□ -1.08
HMGB3P6-201ENST00000444896 FAM26DQ5JW98 314 aa8.29□□□□□ -1.08
HMGB3P6-201ENST00000444896 ANO2Q9NQ90 1003 aa8.29□□□□□ -1.08
HMGB3P6-201ENST00000444896 BCS1LQ9Y276 419 aa8.29□□□□□ -1.08
HMGB3P6-201ENST00000444896 ABL1P00519 1130 aa8.28□□□□□ -1.08
HMGB3P6-201ENST00000444896 THBS1P07996 1170 aa8.28□□□□□ -1.08
HMGB3P6-201ENST00000444896 ZNF211Q13398 564 aaPredicted RBP8.28□□□□□ -1.08
HMGB3P6-201ENST00000444896 CCDC155Q8N6L0 562 aa8.28□□□□□ -1.08
HMGB3P6-201ENST00000444896 HELQQ8TDG4 1101 aa8.28□□□□□ -1.08
HMGB3P6-201ENST00000444896 GAS2L1Q99501 681 aaPredicted RBP8.28□□□□□ -1.08
HMGB3P6-201ENST00000444896 GPAMQ9HCL2 828 aa8.28□□□□□ -1.08
HMGB3P6-201ENST00000444896 KLK14Q9P0G3 267 aa8.28□□□□□ -1.08
HMGB3P6-201ENST00000444896 EGFL7Q9UHF1 273 aa8.28□□□□□ -1.08
HMGB3P6-201ENST00000444896 MTMR7Q9Y216 660 aa8.28□□□□□ -1.08
HMGB3P6-201ENST00000444896 SOWAHDA6NJG2 315 aa8.27□□□□□ -1.09
HMGB3P6-201ENST00000444896 ICMTO60725 284 aa8.27□□□□□ -1.09
HMGB3P6-201ENST00000444896 TATP17735 454 aaPredicted RBP8.27□□□□□ -1.09
HMGB3P6-201ENST00000444896 DGKZQ13574 1117 aa8.27□□□□□ -1.09
HMGB3P6-201ENST00000444896 C11orf91Q3C1V1 193 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms