RNA–Protein interactions for RNA: ENST00000442929.1

FAM3A-214, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-214ENST00000442929 RTCBQ9Y3I0 505 aaKnown RBP24.76■■□□□ 1.55
FAM3A-214ENST00000442929 SALL2Q9Y467 1007 aaPredicted RBP24.76■■□□□ 1.55
FAM3A-214ENST00000442929 ADRA2BP18089 450 aa24.75■■□□□ 1.55
FAM3A-214ENST00000442929 CYP19A1P11511 503 aaPredicted RBP24.74■■□□□ 1.55
FAM3A-214ENST00000442929 NPM2Q86SE8 214 aaKnown RBP24.74■■□□□ 1.55
FAM3A-214ENST00000442929 ZNF853P0CG23 659 aa24.73■■□□□ 1.55
FAM3A-214ENST00000442929 PNPLA7Q6ZV29 1317 aa24.72■■□□□ 1.55
FAM3A-214ENST00000442929 SENP3-EIF4A1A0A087X0R7 540 aa24.72■■□□□ 1.55
FAM3A-214ENST00000442929 CHMP4AQ9BY43 222 aa24.72■■□□□ 1.55
FAM3A-214ENST00000442929 MBIPQ9NS73 344 aa24.72■■□□□ 1.55
FAM3A-214ENST00000442929 GIGYF1O75420 1035 aaPredicted RBP24.71■■□□□ 1.55
FAM3A-214ENST00000442929 RPS6KA4O75676 772 aa24.71■■□□□ 1.55
FAM3A-214ENST00000442929 HOXB7P09629 217 aa24.71■■□□□ 1.55
FAM3A-214ENST00000442929 SLC16A10Q8TF71 515 aa24.71■■□□□ 1.55
FAM3A-214ENST00000442929 MYH16Q9H6N6 1097 aa24.71■■□□□ 1.55
FAM3A-214ENST00000442929 SOS1Q07889 1333 aaPredicted RBP24.7■■□□□ 1.54
FAM3A-214ENST00000442929 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.7■■□□□ 1.54
FAM3A-214ENST00000442929 MSH5O43196 834 aa24.7■■□□□ 1.54
FAM3A-214ENST00000442929 PHF14O94880 888 aa24.69■■□□□ 1.54
FAM3A-214ENST00000442929 TRAPPC3LQ5T215 181 aa24.69■■□□□ 1.54
FAM3A-214ENST00000442929 ERBB4Q15303 1308 aa24.68■■□□□ 1.54
FAM3A-214ENST00000442929 INTS5Q6P9B9 1019 aaKnown RBP24.68■■□□□ 1.54
FAM3A-214ENST00000442929 COL15A1P39059 1388 aa24.67■■□□□ 1.54
FAM3A-214ENST00000442929 COL24A1Q17RW2 1714 aa24.67■■□□□ 1.54
FAM3A-214ENST00000442929 A0A087WZG4 1122 aa24.67■■□□□ 1.54
FAM3A-214ENST00000442929 ZBTB1Q9Y2K1 713 aa24.67■■□□□ 1.54
FAM3A-214ENST00000442929 ZNF521Q96K83 1311 aa24.66■■□□□ 1.54
FAM3A-214ENST00000442929 SCN7AQ01118 1682 aa24.66■■□□□ 1.54
FAM3A-214ENST00000442929 RFC4P35249 363 aa24.66■■□□□ 1.54
FAM3A-214ENST00000442929 IL6STP40189 918 aaPredicted RBP24.66■■□□□ 1.54
FAM3A-214ENST00000442929 GOLGA2Q08379 1002 aa24.66■■□□□ 1.54
FAM3A-214ENST00000442929 USP16Q9Y5T5 823 aa24.66■■□□□ 1.54
FAM3A-214ENST00000442929 BCORQ6W2J9 1755 aa24.65■■□□□ 1.54
FAM3A-214ENST00000442929 CANXP27824 592 aaKnown RBP24.65■■□□□ 1.54
FAM3A-214ENST00000442929 MTFR1LQ9H019 292 aa24.65■■□□□ 1.54
FAM3A-214ENST00000442929 CACNA1FO60840 1977 aa24.64■■□□□ 1.54
FAM3A-214ENST00000442929 HNRNPUQ00839 825 aaKnown RBP eCLIP24.64■■□□□ 1.54
FAM3A-214ENST00000442929 COL23A1Q86Y22 540 aaPredicted RBP24.64■■□□□ 1.54
FAM3A-214ENST00000442929 FANCIQ9NVI1 1328 aa24.63■■□□□ 1.53
FAM3A-214ENST00000442929 PRAMEF22A3QJZ6 481 aa24.63■■□□□ 1.53
FAM3A-214ENST00000442929 E9PSI1 815 aa24.63■■□□□ 1.53
FAM3A-214ENST00000442929 DUSP27Q5VZP5 1158 aa24.62■■□□□ 1.53
FAM3A-214ENST00000442929 TSR2Q969E8 191 aaKnown RBP24.62■■□□□ 1.53
FAM3A-214ENST00000442929 SPON1Q9HCB6 807 aa24.62■■□□□ 1.53
FAM3A-214ENST00000442929 ZNF330Q9Y3S2 320 aaPredicted RBP24.62■■□□□ 1.53
FAM3A-214ENST00000442929 ZPR1O75312 459 aa24.61■■□□□ 1.53
FAM3A-214ENST00000442929 A1BGP04217 495 aa24.61■■□□□ 1.53
FAM3A-214ENST00000442929 HDGFL1Q5TGJ6 251 aa24.61■■□□□ 1.53
FAM3A-214ENST00000442929 EIF2S2P20042 333 aaKnown RBP24.6■■□□□ 1.53
FAM3A-214ENST00000442929 EIF5P55010 431 aaKnown RBP24.6■■□□□ 1.53
FAM3A-214ENST00000442929 ARHGEF1Q92888 912 aaKnown RBP24.6■■□□□ 1.53
FAM3A-214ENST00000442929 USP42Q9H9J4 1324 aaKnown RBP24.59■■□□□ 1.53
FAM3A-214ENST00000442929 ZBTB7AO95365 584 aa24.58■■□□□ 1.53
FAM3A-214ENST00000442929 POLD1P28340 1107 aa24.58■■□□□ 1.53
FAM3A-214ENST00000442929 AMIGO3Q86WK7 504 aa24.58■■□□□ 1.53
FAM3A-214ENST00000442929 KRT24Q2M2I5 525 aa24.57■■□□□ 1.52
FAM3A-214ENST00000442929 PDGFDQ9GZP0 370 aaPredicted RBP24.57■■□□□ 1.52
FAM3A-214ENST00000442929 NARFQ9UHQ1 456 aa24.57■■□□□ 1.52
FAM3A-214ENST00000442929 TWISTNBQ3B726 338 aaPredicted RBP24.56■■□□□ 1.52
FAM3A-214ENST00000442929 CCDC30Q5VVM6 783 aa24.56■■□□□ 1.52
FAM3A-214ENST00000442929 DBF4Q9UBU7 674 aaPredicted RBP24.56■■□□□ 1.52
FAM3A-214ENST00000442929 NLGN1Q8N2Q7 840 aa24.55■■□□□ 1.52
FAM3A-214ENST00000442929 ZBED9Q6R2W3 1325 aa24.55■■□□□ 1.52
FAM3A-214ENST00000442929 NBPF26B4DH59 902 aa24.54■■□□□ 1.52
FAM3A-214ENST00000442929 MYL6BP14649 208 aa24.54■■□□□ 1.52
FAM3A-214ENST00000442929 NBPF10Q6P3W6 841 aaKnown RBP24.54■■□□□ 1.52
FAM3A-214ENST00000442929 KIF6Q6ZMV9 814 aa24.54■■□□□ 1.52
FAM3A-214ENST00000442929 DZIP3Q86Y13 1208 aaKnown RBP24.54■■□□□ 1.52
FAM3A-214ENST00000442929 NBPF15Q8N660 670 aa24.54■■□□□ 1.52
FAM3A-214ENST00000442929 C8orf58Q8NAV2 365 aa24.54■■□□□ 1.52
FAM3A-214ENST00000442929 ARXQ96QS3 562 aa24.54■■□□□ 1.52
FAM3A-214ENST00000442929 DDX21Q9NR30 783 aaKnown RBP eCLIP24.54■■□□□ 1.52
FAM3A-214ENST00000442929 ZNF652Q9Y2D9 606 aa24.54■■□□□ 1.52
FAM3A-214ENST00000442929 ELL2O00472 640 aaPredicted RBP24.53■■□□□ 1.52
FAM3A-214ENST00000442929 RGL2O15211 777 aa24.53■■□□□ 1.52
FAM3A-214ENST00000442929 SLFN5Q08AF3 891 aa24.53■■□□□ 1.52
FAM3A-214ENST00000442929 STK31Q9BXU1 1019 aa24.53■■□□□ 1.52
FAM3A-214ENST00000442929 NUP98P52948 1817 aa24.53■■□□□ 1.52
FAM3A-214ENST00000442929 PIP4K2AP48426 406 aaPredicted RBP24.52■■□□□ 1.52
FAM3A-214ENST00000442929 SMIM5Q71RC9 77 aa24.52■■□□□ 1.52
FAM3A-214ENST00000442929 NECTIN2Q92692 538 aa24.52■■□□□ 1.52
FAM3A-214ENST00000442929 SPINK5Q9NQ38 1064 aaPredicted RBP24.52■■□□□ 1.52
FAM3A-214ENST00000442929 HYPKQ9NX55 129 aa24.52■■□□□ 1.52
FAM3A-214ENST00000442929 ATF5Q9Y2D1 282 aaPredicted RBP24.52■■□□□ 1.52
FAM3A-214ENST00000442929 ANKRD36CQ5JPF3 1778 aa24.52■■□□□ 1.52
FAM3A-214ENST00000442929 GYS1P13807 737 aa24.51■■□□□ 1.51
FAM3A-214ENST00000442929 EXOSC9Q06265 439 aaKnown RBP24.51■■□□□ 1.51
FAM3A-214ENST00000442929 USPL1Q5W0Q7 1092 aa24.51■■□□□ 1.51
FAM3A-214ENST00000442929 PPP1R1BQ9UD71 204 aaPredicted RBP24.51■■□□□ 1.51
FAM3A-214ENST00000442929 MSL1Q68DK7 614 aa24.5■■□□□ 1.51
FAM3A-214ENST00000442929 CHPF2Q9P2E5 772 aa24.5■■□□□ 1.51
FAM3A-214ENST00000442929 SRP68Q9UHB9 627 aaKnown RBP24.49■■□□□ 1.51
FAM3A-214ENST00000442929 TBC1D2BQ9UPU7 963 aa24.49■■□□□ 1.51
FAM3A-214ENST00000442929 CLEC4GQ6UXB4 293 aa24.48■■□□□ 1.51
FAM3A-214ENST00000442929 TSPYL6Q8N831 410 aa24.48■■□□□ 1.51
FAM3A-214ENST00000442929 ARFGEF2Q9Y6D5 1785 aa24.47■■□□□ 1.51
FAM3A-214ENST00000442929 ERVV-1B6SEH8 477 aa24.47■■□□□ 1.51
FAM3A-214ENST00000442929 PDIA6Q15084 440 aa24.47■■□□□ 1.51
FAM3A-214ENST00000442929 ZNF428Q96B54 188 aa24.47■■□□□ 1.51
FAM3A-214ENST00000442929 MAP3K15Q6ZN16 1313 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms