RNA–Protein interactions for RNA: ENST00000442500.6

LINC00454-203, long intergenic non-protein coding RNA 454, humanhuman

TSL 5

Gene LINC00454, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00454-203ENST00000442500 HOXB7P09629 217 aa16.91■□□□□ 0.3
LINC00454-203ENST00000442500 R3HDM1Q15032 1099 aaKnown RBP16.91■□□□□ 0.3
LINC00454-203ENST00000442500 SPINK5Q9NQ38 1064 aaPredicted RBP16.91■□□□□ 0.3
LINC00454-203ENST00000442500 CCDC87Q9NVE4 849 aa16.91■□□□□ 0.3
LINC00454-203ENST00000442500 USP16Q9Y5T5 823 aa16.91■□□□□ 0.3
LINC00454-203ENST00000442500 PNPLA7Q6ZV29 1317 aa16.91■□□□□ 0.3
LINC00454-203ENST00000442500 FANCIQ9NVI1 1328 aa16.91■□□□□ 0.3
LINC00454-203ENST00000442500 GNPATO15228 680 aa16.9■□□□□ 0.3
LINC00454-203ENST00000442500 SSFA2P28290 1259 aa16.9■□□□□ 0.3
LINC00454-203ENST00000442500 AMIGO3Q86WK7 504 aa16.9■□□□□ 0.3
LINC00454-203ENST00000442500 TSR2Q969E8 191 aaKnown RBP16.9■□□□□ 0.3
LINC00454-203ENST00000442500 TFCP2L1Q9NZI6 479 aa16.9■□□□□ 0.3
LINC00454-203ENST00000442500 RPS6KA4O75676 772 aa16.89■□□□□ 0.29
LINC00454-203ENST00000442500 HNRNPUQ00839 825 aaKnown RBP eCLIP16.89■□□□□ 0.29
LINC00454-203ENST00000442500 GOLGA2Q08379 1002 aa16.89■□□□□ 0.29
LINC00454-203ENST00000442500 KRT24Q2M2I5 525 aa16.89■□□□□ 0.29
LINC00454-203ENST00000442500 MYH16Q9H6N6 1097 aa16.89■□□□□ 0.29
LINC00454-203ENST00000442500 ZBTB1Q9Y2K1 713 aa16.89■□□□□ 0.29
LINC00454-203ENST00000442500 SOS1Q07889 1333 aaPredicted RBP16.89■□□□□ 0.29
LINC00454-203ENST00000442500 COL24A1Q17RW2 1714 aa16.88■□□□□ 0.29
LINC00454-203ENST00000442500 PSDA5PKW4 1024 aaPredicted RBP16.88■□□□□ 0.29
LINC00454-203ENST00000442500 ADRA2BP18089 450 aa16.88■□□□□ 0.29
LINC00454-203ENST00000442500 FLAD1Q8NFF5 587 aa16.88■□□□□ 0.29
LINC00454-203ENST00000442500 RTCBQ9Y3I0 505 aaKnown RBP16.88■□□□□ 0.29
LINC00454-203ENST00000442500 ERBB4Q15303 1308 aa16.88■□□□□ 0.29
LINC00454-203ENST00000442500 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.87■□□□□ 0.29
LINC00454-203ENST00000442500 E9PSI1 815 aa16.87■□□□□ 0.29
LINC00454-203ENST00000442500 ZBED9Q6R2W3 1325 aa16.87■□□□□ 0.29
LINC00454-203ENST00000442500 A1BGP04217 495 aa16.86■□□□□ 0.29
LINC00454-203ENST00000442500 EIF5P55010 431 aaKnown RBP16.86■□□□□ 0.29
LINC00454-203ENST00000442500 SLFN5Q08AF3 891 aa16.86■□□□□ 0.29
LINC00454-203ENST00000442500 DUSP27Q5VZP5 1158 aa16.86■□□□□ 0.29
LINC00454-203ENST00000442500 C8orf58Q8NAV2 365 aa16.86■□□□□ 0.29
LINC00454-203ENST00000442500 IL6STP40189 918 aaPredicted RBP16.85■□□□□ 0.29
LINC00454-203ENST00000442500 COL23A1Q86Y22 540 aaPredicted RBP16.85■□□□□ 0.29
LINC00454-203ENST00000442500 TRMT2AQ8IZ69 625 aaKnown RBP16.85■□□□□ 0.29
LINC00454-203ENST00000442500 PDGFDQ9GZP0 370 aaPredicted RBP16.85■□□□□ 0.29
LINC00454-203ENST00000442500 CACNA1FO60840 1977 aa16.85■□□□□ 0.29
LINC00454-203ENST00000442500 COL15A1P39059 1388 aa16.85■□□□□ 0.29
LINC00454-203ENST00000442500 NBPF26B4DH59 902 aa16.84■□□□□ 0.29
LINC00454-203ENST00000442500 NBPF10Q6P3W6 841 aaKnown RBP16.84■□□□□ 0.29
LINC00454-203ENST00000442500 SMIM5Q71RC9 77 aa16.84■□□□□ 0.29
LINC00454-203ENST00000442500 NBPF15Q8N660 670 aa16.84■□□□□ 0.29
LINC00454-203ENST00000442500 TSPYL6Q8N831 410 aa16.84■□□□□ 0.29
LINC00454-203ENST00000442500 SCN7AQ01118 1682 aa16.84■□□□□ 0.29
LINC00454-203ENST00000442500 BCORQ6W2J9 1755 aa16.84■□□□□ 0.29
LINC00454-203ENST00000442500 PHF14O94880 888 aa16.83■□□□□ 0.28
LINC00454-203ENST00000442500 CANXP27824 592 aaKnown RBP16.83■□□□□ 0.28
LINC00454-203ENST00000442500 TRAPPC3LQ5T215 181 aa16.83■□□□□ 0.28
LINC00454-203ENST00000442500 SLC16A10Q8TF71 515 aa16.83■□□□□ 0.28
LINC00454-203ENST00000442500 ARHGEF1Q92888 912 aaKnown RBP16.83■□□□□ 0.28
LINC00454-203ENST00000442500 CDCA7LQ96GN5 454 aa16.83■□□□□ 0.28
LINC00454-203ENST00000442500 EIF2S2P20042 333 aaKnown RBP16.82■□□□□ 0.28
LINC00454-203ENST00000442500 PDIA6Q15084 440 aa16.82■□□□□ 0.28
LINC00454-203ENST00000442500 TWISTNBQ3B726 338 aaPredicted RBP16.82■□□□□ 0.28
LINC00454-203ENST00000442500 HDGFL1Q5TGJ6 251 aa16.82■□□□□ 0.28
LINC00454-203ENST00000442500 LRP10Q7Z4F1 713 aa16.82■□□□□ 0.28
LINC00454-203ENST00000442500 USP42Q9H9J4 1324 aaKnown RBP16.81■□□□□ 0.28
LINC00454-203ENST00000442500 EXOSC9Q06265 439 aaKnown RBP16.81■□□□□ 0.28
LINC00454-203ENST00000442500 CHMP4AQ9BY43 222 aa16.81■□□□□ 0.28
LINC00454-203ENST00000442500 A0A087WZG4 1122 aa16.8■□□□□ 0.28
LINC00454-203ENST00000442500 ELL2O00472 640 aaPredicted RBP16.8■□□□□ 0.28
LINC00454-203ENST00000442500 PIP4K2AP48426 406 aaPredicted RBP16.8■□□□□ 0.28
LINC00454-203ENST00000442500 DDX21Q9NR30 783 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC00454-203ENST00000442500 LRP5O75197 1615 aa16.8■□□□□ 0.28
LINC00454-203ENST00000442500 VAMP4O75379 141 aa16.79■□□□□ 0.28
LINC00454-203ENST00000442500 RFC4P35249 363 aa16.79■□□□□ 0.28
LINC00454-203ENST00000442500 MTFR1LQ9H019 292 aa16.79■□□□□ 0.28
LINC00454-203ENST00000442500 CHPF2Q9P2E5 772 aa16.79■□□□□ 0.28
LINC00454-203ENST00000442500 NARFQ9UHQ1 456 aa16.79■□□□□ 0.28
LINC00454-203ENST00000442500 PROSER3Q2NL68 480 aa16.78■□□□□ 0.28
LINC00454-203ENST00000442500 CCDC30Q5VVM6 783 aa16.78■□□□□ 0.28
LINC00454-203ENST00000442500 NECTIN2Q92692 538 aa16.78■□□□□ 0.28
LINC00454-203ENST00000442500 DBF4Q9UBU7 674 aaPredicted RBP16.78■□□□□ 0.28
LINC00454-203ENST00000442500 RGL2O15211 777 aa16.77■□□□□ 0.28
LINC00454-203ENST00000442500 MSH5O43196 834 aa16.77■□□□□ 0.28
LINC00454-203ENST00000442500 GYS1P13807 737 aa16.77■□□□□ 0.28
LINC00454-203ENST00000442500 MYL6BP14649 208 aa16.77■□□□□ 0.28
LINC00454-203ENST00000442500 SRP68Q9UHB9 627 aaKnown RBP16.77■□□□□ 0.28
LINC00454-203ENST00000442500 NUP98P52948 1817 aa16.76■□□□□ 0.27
LINC00454-203ENST00000442500 CAMTA2O94983 1202 aa16.76■□□□□ 0.27
LINC00454-203ENST00000442500 ZBTB7AO95365 584 aa16.76■□□□□ 0.27
LINC00454-203ENST00000442500 ANXA1P04083 346 aa16.76■□□□□ 0.27
LINC00454-203ENST00000442500 NPM2Q86SE8 214 aaKnown RBP16.76■□□□□ 0.27
LINC00454-203ENST00000442500 DZIP3Q86Y13 1208 aaKnown RBP16.76■□□□□ 0.27
LINC00454-203ENST00000442500 ZNF330Q9Y3S2 320 aaPredicted RBP16.76■□□□□ 0.27
LINC00454-203ENST00000442500 ZPR1O75312 459 aa16.75■□□□□ 0.27
LINC00454-203ENST00000442500 CT47B1P0C2W7 299 aaPredicted RBP16.75■□□□□ 0.27
LINC00454-203ENST00000442500 USPL1Q5W0Q7 1092 aa16.75■□□□□ 0.27
LINC00454-203ENST00000442500 SGIP1Q9BQI5 828 aa16.75■□□□□ 0.27
LINC00454-203ENST00000442500 BCL2L12Q9HB09 334 aa16.75■□□□□ 0.27
LINC00454-203ENST00000442500 HYPKQ9NX55 129 aa16.75■□□□□ 0.27
LINC00454-203ENST00000442500 TBC1D2BQ9UPU7 963 aa16.75■□□□□ 0.27
LINC00454-203ENST00000442500 PTGER2P43116 358 aa16.74■□□□□ 0.27
LINC00454-203ENST00000442500 NLGN1Q8N2Q7 840 aa16.74■□□□□ 0.27
LINC00454-203ENST00000442500 ZNF428Q96B54 188 aa16.74■□□□□ 0.27
LINC00454-203ENST00000442500 SPON1Q9HCB6 807 aa16.74■□□□□ 0.27
LINC00454-203ENST00000442500 MAP3K15Q6ZN16 1313 aa16.73■□□□□ 0.27
LINC00454-203ENST00000442500 ERVV-1B6SEH8 477 aa16.73■□□□□ 0.27
LINC00454-203ENST00000442500 CLEC4GQ6UXB4 293 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms