RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 PRAMEF22A3QJZ6 481 aa20.96■□□□□ 0.95
TRAPPC12-209ENST00000441099 USP16Q9Y5T5 823 aa20.96■□□□□ 0.95
TRAPPC12-209ENST00000441099 SNRPA1P09661 255 aaKnown RBP20.95■□□□□ 0.94
TRAPPC12-209ENST00000441099 CANXP27824 592 aaKnown RBP20.95■□□□□ 0.94
TRAPPC12-209ENST00000441099 NLGN1Q8N2Q7 840 aa20.95■□□□□ 0.94
TRAPPC12-209ENST00000441099 MRS2Q9HD23 443 aa20.95■□□□□ 0.94
TRAPPC12-209ENST00000441099 SRP68Q9UHB9 627 aaKnown RBP20.95■□□□□ 0.94
TRAPPC12-209ENST00000441099 COL5A3P25940 1745 aaPredicted RBP20.95■□□□□ 0.94
TRAPPC12-209ENST00000441099 UBR3Q6ZT12 1888 aa20.94■□□□□ 0.94
TRAPPC12-209ENST00000441099 APAF1O14727 1248 aa20.94■□□□□ 0.94
TRAPPC12-209ENST00000441099 EIF5P55010 431 aaKnown RBP20.94■□□□□ 0.94
TRAPPC12-209ENST00000441099 USP42Q9H9J4 1324 aaKnown RBP20.94■□□□□ 0.94
TRAPPC12-209ENST00000441099 SIPA1L3O60292 1781 aaPredicted RBP20.93■□□□□ 0.94
TRAPPC12-209ENST00000441099 A1BGP04217 495 aa20.93■□□□□ 0.94
TRAPPC12-209ENST00000441099 EIF4A1P60842 406 aaKnown RBP20.93■□□□□ 0.94
TRAPPC12-209ENST00000441099 UBR2Q8IWV8 1755 aa20.92■□□□□ 0.94
TRAPPC12-209ENST00000441099 MMP10P09238 476 aa20.92■□□□□ 0.94
TRAPPC12-209ENST00000441099 BABAM1Q9NWV8 329 aa20.92■□□□□ 0.94
TRAPPC12-209ENST00000441099 COL15A1P39059 1388 aa20.91■□□□□ 0.94
TRAPPC12-209ENST00000441099 COL24A1Q17RW2 1714 aa20.91■□□□□ 0.94
TRAPPC12-209ENST00000441099 TSPYL4Q9UJ04 414 aa20.91■□□□□ 0.94
TRAPPC12-209ENST00000441099 GIGYF1O75420 1035 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC12-209ENST00000441099 IL6STP40189 918 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC12-209ENST00000441099 FKBP8Q14318 412 aa20.9■□□□□ 0.94
TRAPPC12-209ENST00000441099 KLHL34Q8N239 644 aa20.9■□□□□ 0.94
TRAPPC12-209ENST00000441099 NARFQ9UHQ1 456 aa20.9■□□□□ 0.94
TRAPPC12-209ENST00000441099 MYH14Q7Z406 1995 aaKnown RBP20.89■□□□□ 0.93
TRAPPC12-209ENST00000441099 ZPR1O75312 459 aa20.89■□□□□ 0.93
TRAPPC12-209ENST00000441099 USPL1Q5W0Q7 1092 aa20.89■□□□□ 0.93
TRAPPC12-209ENST00000441099 CHL1O00533 1208 aa20.88■□□□□ 0.93
TRAPPC12-209ENST00000441099 NLGN2Q8NFZ4 835 aa20.88■□□□□ 0.93
TRAPPC12-209ENST00000441099 BCL2L12Q9HB09 334 aa20.88■□□□□ 0.93
TRAPPC12-209ENST00000441099 CD2APQ9Y5K6 639 aa20.88■□□□□ 0.93
TRAPPC12-209ENST00000441099 A0A087WZG4 1122 aa20.87■□□□□ 0.93
TRAPPC12-209ENST00000441099 PIP4K2AP48426 406 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC12-209ENST00000441099 NBPF26B4DH59 902 aa20.86■□□□□ 0.93
TRAPPC12-209ENST00000441099 TM4SF1P30408 202 aa20.86■□□□□ 0.93
TRAPPC12-209ENST00000441099 NBPF10Q6P3W6 841 aaKnown RBP20.86■□□□□ 0.93
TRAPPC12-209ENST00000441099 NBPF15Q8N660 670 aa20.86■□□□□ 0.93
TRAPPC12-209ENST00000441099 ZNF330Q9Y3S2 320 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC12-209ENST00000441099 VIRMAQ69YN4 1812 aaKnown RBP20.84■□□□□ 0.93
TRAPPC12-209ENST00000441099 DDR1Q08345 913 aa20.84■□□□□ 0.93
TRAPPC12-209ENST00000441099 TBC1D2BQ9UPU7 963 aa20.84■□□□□ 0.93
TRAPPC12-209ENST00000441099 PARP3Q9Y6F1 533 aa20.84■□□□□ 0.93
TRAPPC12-209ENST00000441099 ZNF853P0CG23 659 aa20.83■□□□□ 0.93
TRAPPC12-209ENST00000441099 CFAP44Q96MT7 982 aa20.83■□□□□ 0.93
TRAPPC12-209ENST00000441099 LAS1LQ9Y4W2 734 aaKnown RBP20.83■□□□□ 0.93
TRAPPC12-209ENST00000441099 POLRMTO00411 1230 aaKnown RBP20.82■□□□□ 0.92
TRAPPC12-209ENST00000441099 NFIXQ14938 502 aa20.82■□□□□ 0.92
TRAPPC12-209ENST00000441099 CAMTA2O94983 1202 aa20.81■□□□□ 0.92
TRAPPC12-209ENST00000441099 DZIP3Q86Y13 1208 aaKnown RBP20.81■□□□□ 0.92
TRAPPC12-209ENST00000441099 DLG5Q8TDM6 1919 aa20.8■□□□□ 0.92
TRAPPC12-209ENST00000441099 SENP3-EIF4A1A0A087X0R7 540 aa20.8■□□□□ 0.92
TRAPPC12-209ENST00000441099 CALD1Q05682 793 aaKnown RBP20.8■□□□□ 0.92
TRAPPC12-209ENST00000441099 CCDC27Q2M243 656 aa20.8■□□□□ 0.92
TRAPPC12-209ENST00000441099 KRT24Q2M2I5 525 aa20.8■□□□□ 0.92
TRAPPC12-209ENST00000441099 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
TRAPPC12-209ENST00000441099 NPM2Q86SE8 214 aaKnown RBP20.8■□□□□ 0.92
TRAPPC12-209ENST00000441099 DCAF8L1A6NGE4 600 aa20.79■□□□□ 0.92
TRAPPC12-209ENST00000441099 MBIPQ9NS73 344 aa20.79■□□□□ 0.92
TRAPPC12-209ENST00000441099 IFT57Q9NWB7 429 aa20.79■□□□□ 0.92
TRAPPC12-209ENST00000441099 KDM3BQ7LBC6 1761 aa20.78■□□□□ 0.92
TRAPPC12-209ENST00000441099 TBC1D9BQ66K14 1250 aa20.78■□□□□ 0.92
TRAPPC12-209ENST00000441099 FAM9BQ8IZU0 186 aa20.78■□□□□ 0.92
TRAPPC12-209ENST00000441099 C4AP0C0L4 1744 aa20.78■□□□□ 0.92
TRAPPC12-209ENST00000441099 C10orf71Q711Q0 1435 aa20.78■□□□□ 0.92
TRAPPC12-209ENST00000441099 WWC1Q8IX03 1113 aa20.77■□□□□ 0.92
TRAPPC12-209ENST00000441099 ERBB4Q15303 1308 aa20.77■□□□□ 0.91
TRAPPC12-209ENST00000441099 EIF2S2P20042 333 aaKnown RBP20.76■□□□□ 0.91
TRAPPC12-209ENST00000441099 TGFB2P61812 414 aa20.76■□□□□ 0.91
TRAPPC12-209ENST00000441099 GNAI1P63096 354 aa20.76■□□□□ 0.91
TRAPPC12-209ENST00000441099 PDIA6Q15084 440 aa20.76■□□□□ 0.91
TRAPPC12-209ENST00000441099 BICDL1Q6ZP65 573 aa20.76■□□□□ 0.91
TRAPPC12-209ENST00000441099 SERPINB2P05120 415 aa20.75■□□□□ 0.91
TRAPPC12-209ENST00000441099 GPR162Q16538 588 aa20.75■□□□□ 0.91
TRAPPC12-209ENST00000441099 CLEC4GQ6UXB4 293 aa20.75■□□□□ 0.91
TRAPPC12-209ENST00000441099 LRP10Q7Z4F1 713 aa20.75■□□□□ 0.91
TRAPPC12-209ENST00000441099 RGL2O15211 777 aa20.74■□□□□ 0.91
TRAPPC12-209ENST00000441099 MYL6BP14649 208 aa20.74■□□□□ 0.91
TRAPPC12-209ENST00000441099 NGEFQ8N5V2 710 aa20.74■□□□□ 0.91
TRAPPC12-209ENST00000441099 HOXB7P09629 217 aa20.73■□□□□ 0.91
TRAPPC12-209ENST00000441099 YBX3P16989 372 aaKnown RBP eCLIP20.73■□□□□ 0.91
TRAPPC12-209ENST00000441099 TTLL7Q6ZT98 887 aa20.73■□□□□ 0.91
TRAPPC12-209ENST00000441099 A0A0G2JLW4 131 aa20.72■□□□□ 0.91
TRAPPC12-209ENST00000441099 HLFQ16534 295 aa20.72■□□□□ 0.91
TRAPPC12-209ENST00000441099 PROSER3Q2NL68 480 aa20.72■□□□□ 0.91
TRAPPC12-209ENST00000441099 PELP1Q8IZL8 1130 aaKnown RBP20.72■□□□□ 0.91
TRAPPC12-209ENST00000441099 PXDNLA1KZ92 1463 aa20.72■□□□□ 0.91
TRAPPC12-209ENST00000441099 UTRNP46939 3433 aa20.72■□□□□ 0.91
TRAPPC12-209ENST00000441099 ERVV-1B6SEH8 477 aa20.71■□□□□ 0.91
TRAPPC12-209ENST00000441099 DPEP1P16444 411 aa20.71■□□□□ 0.91
TRAPPC12-209ENST00000441099 DUSP27Q5VZP5 1158 aa20.71■□□□□ 0.91
TRAPPC12-209ENST00000441099 NECTIN2Q92692 538 aa20.71■□□□□ 0.91
TRAPPC12-209ENST00000441099 SETDB2Q96T68 719 aa20.71■□□□□ 0.91
TRAPPC12-209ENST00000441099 ZNF652Q9Y2D9 606 aa20.71■□□□□ 0.91
TRAPPC12-209ENST00000441099 IL16Q14005 1332 aa20.71■□□□□ 0.91
TRAPPC12-209ENST00000441099 CCER2I3L3R5 266 aa20.7■□□□□ 0.9
TRAPPC12-209ENST00000441099 ANXA1P04083 346 aa20.7■□□□□ 0.9
TRAPPC12-209ENST00000441099 KCNA3P22001 575 aa20.7■□□□□ 0.9
TRAPPC12-209ENST00000441099 SALL2Q9Y467 1007 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms