RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 SGIP1Q9BQI5 828 aa23.67■■□□□ 1.38
CPSF4-205ENST00000440514 ZBTB1Q9Y2K1 713 aa23.67■■□□□ 1.38
CPSF4-205ENST00000440514 FAM9BQ8IZU0 186 aa23.66■■□□□ 1.38
CPSF4-205ENST00000440514 TSPYL4Q9UJ04 414 aa23.65■■□□□ 1.38
CPSF4-205ENST00000440514 SOS1Q07889 1333 aaPredicted RBP23.64■■□□□ 1.38
CPSF4-205ENST00000440514 TRAPPC3LQ5T215 181 aa23.64■■□□□ 1.37
CPSF4-205ENST00000440514 PPP1R1BQ9UD71 204 aaPredicted RBP23.64■■□□□ 1.37
CPSF4-205ENST00000440514 STARD3NLO95772 234 aa23.63■■□□□ 1.37
CPSF4-205ENST00000440514 ADRA2BP18089 450 aa23.63■■□□□ 1.37
CPSF4-205ENST00000440514 DIEXFQ68CQ4 756 aaKnown RBP23.63■■□□□ 1.37
CPSF4-205ENST00000440514 ARHGEF1Q92888 912 aaKnown RBP23.63■■□□□ 1.37
CPSF4-205ENST00000440514 TEX13AQ9BXU3 409 aaPredicted RBP23.63■■□□□ 1.37
CPSF4-205ENST00000440514 COL15A1P39059 1388 aa23.63■■□□□ 1.37
CPSF4-205ENST00000440514 SNRPA1P09661 255 aaKnown RBP23.62■■□□□ 1.37
CPSF4-205ENST00000440514 CANXP27824 592 aaKnown RBP23.62■■□□□ 1.37
CPSF4-205ENST00000440514 EIF4A1P60842 406 aaKnown RBP23.62■■□□□ 1.37
CPSF4-205ENST00000440514 USP16Q9Y5T5 823 aa23.62■■□□□ 1.37
CPSF4-205ENST00000440514 LAS1LQ9Y4W2 734 aaKnown RBP23.61■■□□□ 1.37
CPSF4-205ENST00000440514 A1BGP04217 495 aa23.6■■□□□ 1.37
CPSF4-205ENST00000440514 RFC4P35249 363 aa23.6■■□□□ 1.37
CPSF4-205ENST00000440514 POLD1P28340 1107 aa23.59■■□□□ 1.37
CPSF4-205ENST00000440514 PIP4K2AP48426 406 aaPredicted RBP23.59■■□□□ 1.37
CPSF4-205ENST00000440514 SRP68Q9UHB9 627 aaKnown RBP23.59■■□□□ 1.37
CPSF4-205ENST00000440514 USP42Q9H9J4 1324 aaKnown RBP23.59■■□□□ 1.37
CPSF4-205ENST00000440514 SCN7AQ01118 1682 aa23.58■■□□□ 1.37
CPSF4-205ENST00000440514 ARXQ96QS3 562 aa23.58■■□□□ 1.37
CPSF4-205ENST00000440514 BABAM1Q9NWV8 329 aa23.58■■□□□ 1.37
CPSF4-205ENST00000440514 CCER2I3L3R5 266 aa23.57■■□□□ 1.36
CPSF4-205ENST00000440514 CHL1O00533 1208 aa23.57■■□□□ 1.36
CPSF4-205ENST00000440514 GIGYF1O75420 1035 aaPredicted RBP23.57■■□□□ 1.36
CPSF4-205ENST00000440514 ZNF330Q9Y3S2 320 aaPredicted RBP23.57■■□□□ 1.36
CPSF4-205ENST00000440514 GYS1P13807 737 aa23.56■■□□□ 1.36
CPSF4-205ENST00000440514 EIF5P55010 431 aaKnown RBP23.55■■□□□ 1.36
CPSF4-205ENST00000440514 KRT24Q2M2I5 525 aa23.54■■□□□ 1.36
CPSF4-205ENST00000440514 CFAP44Q96MT7 982 aa23.54■■□□□ 1.36
CPSF4-205ENST00000440514 SALL2Q9Y467 1007 aaPredicted RBP23.54■■□□□ 1.36
CPSF4-205ENST00000440514 BCORQ6W2J9 1755 aa23.54■■□□□ 1.36
CPSF4-205ENST00000440514 IL6STP40189 918 aaPredicted RBP23.53■■□□□ 1.36
CPSF4-205ENST00000440514 CALD1Q05682 793 aaKnown RBP23.53■■□□□ 1.36
CPSF4-205ENST00000440514 CCDC27Q2M243 656 aa23.53■■□□□ 1.36
CPSF4-205ENST00000440514 USPL1Q5W0Q7 1092 aa23.53■■□□□ 1.36
CPSF4-205ENST00000440514 WWC1Q8IX03 1113 aa23.53■■□□□ 1.36
CPSF4-205ENST00000440514 MIER1Q8N108 512 aa23.53■■□□□ 1.36
CPSF4-205ENST00000440514 FHDC1Q9C0D6 1143 aaPredicted RBP23.53■■□□□ 1.36
CPSF4-205ENST00000440514 MBIPQ9NS73 344 aa23.53■■□□□ 1.36
CPSF4-205ENST00000440514 NBPF26B4DH59 902 aa23.52■■□□□ 1.36
CPSF4-205ENST00000440514 ZNF853P0CG23 659 aa23.52■■□□□ 1.36
CPSF4-205ENST00000440514 NBPF10Q6P3W6 841 aaKnown RBP23.52■■□□□ 1.36
CPSF4-205ENST00000440514 KLHL34Q8N239 644 aa23.52■■□□□ 1.36
CPSF4-205ENST00000440514 NBPF15Q8N660 670 aa23.52■■□□□ 1.36
CPSF4-205ENST00000440514 IFT57Q9NWB7 429 aa23.52■■□□□ 1.36
CPSF4-205ENST00000440514 ZPR1O75312 459 aa23.51■■□□□ 1.35
CPSF4-205ENST00000440514 MMP10P09238 476 aa23.51■■□□□ 1.35
CPSF4-205ENST00000440514 GNAI1P63096 354 aa23.51■■□□□ 1.35
CPSF4-205ENST00000440514 FKBP8Q14318 412 aa23.51■■□□□ 1.35
CPSF4-205ENST00000440514 NARFQ9UHQ1 456 aa23.51■■□□□ 1.35
CPSF4-205ENST00000440514 NLGN1Q8N2Q7 840 aa23.5■■□□□ 1.35
CPSF4-205ENST00000440514 A0A087WZG4 1122 aa23.49■■□□□ 1.35
CPSF4-205ENST00000440514 BCL2L12Q9HB09 334 aa23.49■■□□□ 1.35
CPSF4-205ENST00000440514 TBC1D2BQ9UPU7 963 aa23.49■■□□□ 1.35
CPSF4-205ENST00000440514 NCBP3Q53F19 620 aaKnown RBP23.48■■□□□ 1.35
CPSF4-205ENST00000440514 EIF2S2P20042 333 aaKnown RBP23.47■■□□□ 1.35
CPSF4-205ENST00000440514 NPM2Q86SE8 214 aaKnown RBP23.46■■□□□ 1.35
CPSF4-205ENST00000440514 DZIP3Q86Y13 1208 aaKnown RBP23.46■■□□□ 1.35
CPSF4-205ENST00000440514 NECTIN2Q92692 538 aa23.46■■□□□ 1.35
CPSF4-205ENST00000440514 TSR2Q969E8 191 aaKnown RBP23.46■■□□□ 1.35
CPSF4-205ENST00000440514 SYT17Q9BSW7 474 aa23.46■■□□□ 1.35
CPSF4-205ENST00000440514 MYL6BP14649 208 aa23.45■■□□□ 1.34
CPSF4-205ENST00000440514 DDR1Q08345 913 aa23.45■■□□□ 1.34
CPSF4-205ENST00000440514 ERBB4Q15303 1308 aa23.44■■□□□ 1.34
CPSF4-205ENST00000440514 CAMTA2O94983 1202 aa23.44■■□□□ 1.34
CPSF4-205ENST00000440514 NGEFQ8N5V2 710 aa23.44■■□□□ 1.34
CPSF4-205ENST00000440514 IL16Q14005 1332 aa23.43■■□□□ 1.34
CPSF4-205ENST00000440514 DUSP27Q5VZP5 1158 aa23.43■■□□□ 1.34
CPSF4-205ENST00000440514 NLGN2Q8NFZ4 835 aa23.43■■□□□ 1.34
CPSF4-205ENST00000440514 KIF13BQ9NQT8 1826 aa23.43■■□□□ 1.34
CPSF4-205ENST00000440514 ANXA1P04083 346 aa23.42■■□□□ 1.34
CPSF4-205ENST00000440514 NFIXQ14938 502 aa23.42■■□□□ 1.34
CPSF4-205ENST00000440514 PROSER3Q2NL68 480 aa23.42■■□□□ 1.34
CPSF4-205ENST00000440514 PARP3Q9Y6F1 533 aa23.42■■□□□ 1.34
CPSF4-205ENST00000440514 AFDNP55196 1824 aaKnown RBP23.42■■□□□ 1.34
CPSF4-205ENST00000440514 C10orf71Q711Q0 1435 aa23.42■■□□□ 1.34
CPSF4-205ENST00000440514 POLRMTO00411 1230 aaKnown RBP23.41■■□□□ 1.34
CPSF4-205ENST00000440514 HOXB7P09629 217 aa23.41■■□□□ 1.34
CPSF4-205ENST00000440514 TM4SF1P30408 202 aa23.41■■□□□ 1.34
CPSF4-205ENST00000440514 PDIA6Q15084 440 aa23.41■■□□□ 1.34
CPSF4-205ENST00000440514 HDGFL1Q5TGJ6 251 aa23.41■■□□□ 1.34
CPSF4-205ENST00000440514 KIAA1551Q9HCM1 1747 aa23.41■■□□□ 1.34
CPSF4-205ENST00000440514 NRXN2Q9P2S2 1712 aa23.41■■□□□ 1.34
CPSF4-205ENST00000440514 ELL2O00472 640 aaPredicted RBP23.4■■□□□ 1.34
CPSF4-205ENST00000440514 BICDL1Q6ZP65 573 aa23.4■■□□□ 1.34
CPSF4-205ENST00000440514 WDR63Q8IWG1 891 aa23.4■■□□□ 1.34
CPSF4-205ENST00000440514 C8orf58Q8NAV2 365 aa23.4■■□□□ 1.34
CPSF4-205ENST00000440514 FANCIQ9NVI1 1328 aa23.39■■□□□ 1.34
CPSF4-205ENST00000440514 TBC1D9BQ66K14 1250 aa23.39■■□□□ 1.33
CPSF4-205ENST00000440514 LRP10Q7Z4F1 713 aa23.39■■□□□ 1.33
CPSF4-205ENST00000440514 TTLL7Q6ZT98 887 aa23.38■■□□□ 1.33
CPSF4-205ENST00000440514 SPINK5Q9NQ38 1064 aaPredicted RBP23.38■■□□□ 1.33
CPSF4-205ENST00000440514 CHPF2Q9P2E5 772 aa23.38■■□□□ 1.33
CPSF4-205ENST00000440514 CD2APQ9Y5K6 639 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms