RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 CCER2I3L3R5 266 aa13.73□□□□□ -0.21
UBE2F-213ENST00000439780 CHL1O00533 1208 aa13.73□□□□□ -0.21
UBE2F-213ENST00000439780 FLAD1Q8NFF5 587 aa13.73□□□□□ -0.21
UBE2F-213ENST00000439780 SLC16A10Q8TF71 515 aa13.73□□□□□ -0.21
UBE2F-213ENST00000439780 ARHGEF1Q92888 912 aaKnown RBP13.73□□□□□ -0.21
UBE2F-213ENST00000439780 TSPYL4Q9UJ04 414 aa13.73□□□□□ -0.21
UBE2F-213ENST00000439780 ZBTB1Q9Y2K1 713 aa13.73□□□□□ -0.21
UBE2F-213ENST00000439780 A1BGP04217 495 aa13.72□□□□□ -0.21
UBE2F-213ENST00000439780 SNRPA1P09661 255 aaKnown RBP13.72□□□□□ -0.21
UBE2F-213ENST00000439780 TRAPPC3LQ5T215 181 aa13.72□□□□□ -0.21
UBE2F-213ENST00000439780 MSL1Q68DK7 614 aa13.72□□□□□ -0.21
UBE2F-213ENST00000439780 TEX13AQ9BXU3 409 aaPredicted RBP13.72□□□□□ -0.21
UBE2F-213ENST00000439780 LAS1LQ9Y4W2 734 aaKnown RBP13.72□□□□□ -0.21
UBE2F-213ENST00000439780 SOS1Q07889 1333 aaPredicted RBP13.71□□□□□ -0.21
UBE2F-213ENST00000439780 GIGYF1O75420 1035 aaPredicted RBP13.71□□□□□ -0.21
UBE2F-213ENST00000439780 STARD3NLO95772 234 aa13.71□□□□□ -0.21
UBE2F-213ENST00000439780 ZNF853P0CG23 659 aa13.71□□□□□ -0.21
UBE2F-213ENST00000439780 CANXP27824 592 aaKnown RBP13.71□□□□□ -0.21
UBE2F-213ENST00000439780 BABAM1Q9NWV8 329 aa13.71□□□□□ -0.21
UBE2F-213ENST00000439780 ADRA2BP18089 450 aa13.7□□□□□ -0.22
UBE2F-213ENST00000439780 PIP4K2AP48426 406 aaPredicted RBP13.7□□□□□ -0.22
UBE2F-213ENST00000439780 CCDC27Q2M243 656 aa13.7□□□□□ -0.22
UBE2F-213ENST00000439780 KRT24Q2M2I5 525 aa13.7□□□□□ -0.22
UBE2F-213ENST00000439780 WWC1Q8IX03 1113 aa13.7□□□□□ -0.22
UBE2F-213ENST00000439780 CFAP44Q96MT7 982 aa13.7□□□□□ -0.22
UBE2F-213ENST00000439780 SRP68Q9UHB9 627 aaKnown RBP13.7□□□□□ -0.22
UBE2F-213ENST00000439780 SALL2Q9Y467 1007 aaPredicted RBP13.7□□□□□ -0.22
UBE2F-213ENST00000439780 COL24A1Q17RW2 1714 aa13.7□□□□□ -0.22
UBE2F-213ENST00000439780 NBPF26B4DH59 902 aa13.69□□□□□ -0.22
UBE2F-213ENST00000439780 EIF5P55010 431 aaKnown RBP13.69□□□□□ -0.22
UBE2F-213ENST00000439780 NBPF10Q6P3W6 841 aaKnown RBP13.69□□□□□ -0.22
UBE2F-213ENST00000439780 NBPF15Q8N660 670 aa13.69□□□□□ -0.22
UBE2F-213ENST00000439780 MBIPQ9NS73 344 aa13.69□□□□□ -0.22
UBE2F-213ENST00000439780 C4AP0C0L4 1744 aa13.68□□□□□ -0.22
UBE2F-213ENST00000439780 GYS1P13807 737 aa13.68□□□□□ -0.22
UBE2F-213ENST00000439780 RFC4P35249 363 aa13.68□□□□□ -0.22
UBE2F-213ENST00000439780 NCBP3Q53F19 620 aaKnown RBP13.68□□□□□ -0.22
UBE2F-213ENST00000439780 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
UBE2F-213ENST00000439780 COL15A1P39059 1388 aa13.67□□□□□ -0.22
UBE2F-213ENST00000439780 USP42Q9H9J4 1324 aaKnown RBP13.66□□□□□ -0.22
UBE2F-213ENST00000439780 IL6STP40189 918 aaPredicted RBP13.66□□□□□ -0.22
UBE2F-213ENST00000439780 GNAI1P63096 354 aa13.66□□□□□ -0.22
UBE2F-213ENST00000439780 ARXQ96QS3 562 aa13.66□□□□□ -0.22
UBE2F-213ENST00000439780 BCL2L12Q9HB09 334 aa13.66□□□□□ -0.22
UBE2F-213ENST00000439780 CALD1Q05682 793 aaKnown RBP13.65□□□□□ -0.22
UBE2F-213ENST00000439780 FKBP8Q14318 412 aa13.65□□□□□ -0.22
UBE2F-213ENST00000439780 USPL1Q5W0Q7 1092 aa13.65□□□□□ -0.22
UBE2F-213ENST00000439780 PPP1R1BQ9UD71 204 aaPredicted RBP13.65□□□□□ -0.22
UBE2F-213ENST00000439780 NARFQ9UHQ1 456 aa13.65□□□□□ -0.22
UBE2F-213ENST00000439780 ZNF330Q9Y3S2 320 aaPredicted RBP13.65□□□□□ -0.22
UBE2F-213ENST00000439780 LAMB4A4D0S4 1761 aa13.65□□□□□ -0.22
UBE2F-213ENST00000439780 POLD1P28340 1107 aa13.64□□□□□ -0.23
UBE2F-213ENST00000439780 TSR2Q969E8 191 aaKnown RBP13.64□□□□□ -0.23
UBE2F-213ENST00000439780 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
UBE2F-213ENST00000439780 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
UBE2F-213ENST00000439780 MMP10P09238 476 aa13.63□□□□□ -0.23
UBE2F-213ENST00000439780 EIF2S2P20042 333 aaKnown RBP13.63□□□□□ -0.23
UBE2F-213ENST00000439780 PDIA6Q15084 440 aa13.63□□□□□ -0.23
UBE2F-213ENST00000439780 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
UBE2F-213ENST00000439780 NLGN1Q8N2Q7 840 aa13.63□□□□□ -0.23
UBE2F-213ENST00000439780 C8orf58Q8NAV2 365 aa13.63□□□□□ -0.23
UBE2F-213ENST00000439780 NECTIN2Q92692 538 aa13.63□□□□□ -0.23
UBE2F-213ENST00000439780 FHDC1Q9C0D6 1143 aaPredicted RBP13.63□□□□□ -0.23
UBE2F-213ENST00000439780 IL16Q14005 1332 aa13.63□□□□□ -0.23
UBE2F-213ENST00000439780 ZNF521Q96K83 1311 aa13.63□□□□□ -0.23
UBE2F-213ENST00000439780 A0A087WZG4 1122 aa13.62□□□□□ -0.23
UBE2F-213ENST00000439780 ZPR1O75312 459 aa13.62□□□□□ -0.23
UBE2F-213ENST00000439780 CAMTA2O94983 1202 aa13.62□□□□□ -0.23
UBE2F-213ENST00000439780 PROSER3Q2NL68 480 aa13.62□□□□□ -0.23
UBE2F-213ENST00000439780 DUSP27Q5VZP5 1158 aa13.62□□□□□ -0.23
UBE2F-213ENST00000439780 LRP10Q7Z4F1 713 aa13.62□□□□□ -0.23
UBE2F-213ENST00000439780 ELL2O00472 640 aaPredicted RBP13.61□□□□□ -0.23
UBE2F-213ENST00000439780 ANXA1P04083 346 aa13.61□□□□□ -0.23
UBE2F-213ENST00000439780 MYL6BP14649 208 aa13.61□□□□□ -0.23
UBE2F-213ENST00000439780 TM4SF1P30408 202 aa13.61□□□□□ -0.23
UBE2F-213ENST00000439780 DDR1Q08345 913 aa13.61□□□□□ -0.23
UBE2F-213ENST00000439780 DZIP3Q86Y13 1208 aaKnown RBP13.61□□□□□ -0.23
UBE2F-213ENST00000439780 NGEFQ8N5V2 710 aa13.61□□□□□ -0.23
UBE2F-213ENST00000439780 TSPYL6Q8N831 410 aa13.61□□□□□ -0.23
UBE2F-213ENST00000439780 NFIXQ14938 502 aa13.6□□□□□ -0.23
UBE2F-213ENST00000439780 TTLL7Q6ZT98 887 aa13.6□□□□□ -0.23
UBE2F-213ENST00000439780 SYT17Q9BSW7 474 aa13.6□□□□□ -0.23
UBE2F-213ENST00000439780 HOXB7P09629 217 aa13.59□□□□□ -0.23
UBE2F-213ENST00000439780 TBC1D9BQ66K14 1250 aa13.59□□□□□ -0.23
UBE2F-213ENST00000439780 ERBB4Q15303 1308 aa13.59□□□□□ -0.23
UBE2F-213ENST00000439780 FANCIQ9NVI1 1328 aa13.59□□□□□ -0.23
UBE2F-213ENST00000439780 POLRMTO00411 1230 aaKnown RBP13.58□□□□□ -0.24
UBE2F-213ENST00000439780 HLFQ16534 295 aa13.58□□□□□ -0.24
UBE2F-213ENST00000439780 HDGFL1Q5TGJ6 251 aa13.58□□□□□ -0.24
UBE2F-213ENST00000439780 KLHL34Q8N239 644 aa13.58□□□□□ -0.24
UBE2F-213ENST00000439780 NLGN2Q8NFZ4 835 aa13.58□□□□□ -0.24
UBE2F-213ENST00000439780 CHPF2Q9P2E5 772 aa13.58□□□□□ -0.24
UBE2F-213ENST00000439780 SCN7AQ01118 1682 aa13.58□□□□□ -0.24
UBE2F-213ENST00000439780 BICDL1Q6ZP65 573 aa13.57□□□□□ -0.24
UBE2F-213ENST00000439780 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
UBE2F-213ENST00000439780 DDX21Q9NR30 783 aaKnown RBP eCLIP13.57□□□□□ -0.24
UBE2F-213ENST00000439780 PARP3Q9Y6F1 533 aa13.57□□□□□ -0.24
UBE2F-213ENST00000439780 BCORQ6W2J9 1755 aa13.56□□□□□ -0.24
UBE2F-213ENST00000439780 EXOSC9Q06265 439 aaKnown RBP13.56□□□□□ -0.24
UBE2F-213ENST00000439780 AIMP1Q12904 312 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms