RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 ABCC6O95255 1503 aa14.39□□□□□ -0.11
LMO3-207ENST00000439600 SHPRHQ149N8 1683 aa14.39□□□□□ -0.11
LMO3-207ENST00000439600 U2AF1L5P0DN76 240 aaPredicted RBP14.38□□□□□ -0.11
LMO3-207ENST00000439600 U2AF1Q01081 240 aaKnown RBP eCLIP14.38□□□□□ -0.11
LMO3-207ENST00000439600 METTL3Q86U44 580 aaKnown RBP14.38□□□□□ -0.11
LMO3-207ENST00000439600 LTV1Q96GA3 475 aaPredicted RBP14.38□□□□□ -0.11
LMO3-207ENST00000439600 ADGRG1Q9Y653 693 aa14.38□□□□□ -0.11
LMO3-207ENST00000439600 ERBB3P21860 1342 aa14.38□□□□□ -0.11
LMO3-207ENST00000439600 TOM1L2Q6ZVM7 507 aa14.37□□□□□ -0.11
LMO3-207ENST00000439600 UNC5CLQ8IV45 518 aa14.37□□□□□ -0.11
LMO3-207ENST00000439600 STRN4Q9NRL3 753 aa14.37□□□□□ -0.11
LMO3-207ENST00000439600 NLRP2Q9NX02 1062 aa14.37□□□□□ -0.11
LMO3-207ENST00000439600 WDR17Q8IZU2 1322 aa14.37□□□□□ -0.11
LMO3-207ENST00000439600 USP21Q9UK80 565 aa14.36□□□□□ -0.11
LMO3-207ENST00000439600 MDM2Q00987 491 aaPredicted RBP14.35□□□□□ -0.11
LMO3-207ENST00000439600 CCDC184Q52MB2 194 aa14.35□□□□□ -0.11
LMO3-207ENST00000439600 ZNF772Q68DY9 489 aaPredicted RBP14.35□□□□□ -0.11
LMO3-207ENST00000439600 PXYLP1Q8TE99 480 aa14.35□□□□□ -0.11
LMO3-207ENST00000439600 CDCA7LQ96GN5 454 aa14.35□□□□□ -0.11
LMO3-207ENST00000439600 PHOX2BQ99453 314 aa14.35□□□□□ -0.11
LMO3-207ENST00000439600 EYA1Q99502 592 aa14.35□□□□□ -0.11
LMO3-207ENST00000439600 CARD10Q9BWT7 1032 aa14.35□□□□□ -0.11
LMO3-207ENST00000439600 THRAP3Q9Y2W1 955 aaKnown RBP14.35□□□□□ -0.11
LMO3-207ENST00000439600 PHRF1Q9P1Y6 1649 aaKnown RBP14.34□□□□□ -0.11
LMO3-207ENST00000439600 NBPF6Q5VWK0 638 aa14.34□□□□□ -0.11
LMO3-207ENST00000439600 FAM9BQ8IZU0 186 aa14.34□□□□□ -0.11
LMO3-207ENST00000439600 NBPF4Q96M43 638 aa14.34□□□□□ -0.11
LMO3-207ENST00000439600 ADAMTS8Q9UP79 889 aa14.34□□□□□ -0.11
LMO3-207ENST00000439600 PTPREP23469 700 aa14.33□□□□□ -0.12
LMO3-207ENST00000439600 VPS72Q15906 364 aa14.33□□□□□ -0.12
LMO3-207ENST00000439600 SULT6B1Q6IMI4 303 aa14.33□□□□□ -0.12
LMO3-207ENST00000439600 RBM46Q8TBY0 533 aaKnown RBP14.33□□□□□ -0.12
LMO3-207ENST00000439600 REPIN1Q9BWE0 567 aaKnown RBP14.33□□□□□ -0.12
LMO3-207ENST00000439600 CDCA7Q9BWT1 371 aaPredicted RBP14.33□□□□□ -0.12
LMO3-207ENST00000439600 IGSF1Q8N6C5 1336 aa14.33□□□□□ -0.12
LMO3-207ENST00000439600 PPP1R3GB7ZBB8 358 aa14.32□□□□□ -0.12
LMO3-207ENST00000439600 MS4A1P11836 297 aa14.32□□□□□ -0.12
LMO3-207ENST00000439600 LARP1Q6PKG0 1096 aaKnown RBP14.32□□□□□ -0.12
LMO3-207ENST00000439600 RAPGEF4Q8WZA2 1011 aa14.32□□□□□ -0.12
LMO3-207ENST00000439600 TRPC5Q9UL62 973 aaPredicted RBP14.32□□□□□ -0.12
LMO3-207ENST00000439600 CCDC9Q9Y3X0 531 aaKnown RBP14.32□□□□□ -0.12
LMO3-207ENST00000439600 AFF2P51816 1311 aa14.32□□□□□ -0.12
LMO3-207ENST00000439600 MARF1Q9Y4F3 1742 aaKnown RBP14.32□□□□□ -0.12
LMO3-207ENST00000439600 SLIT2O94813 1529 aa14.31□□□□□ -0.12
LMO3-207ENST00000439600 COL14A1Q05707 1796 aaKnown RBP14.31□□□□□ -0.12
LMO3-207ENST00000439600 CRB1P82279 1406 aa14.31□□□□□ -0.12
LMO3-207ENST00000439600 COL5A2P05997 1499 aaPredicted RBP14.31□□□□□ -0.12
LMO3-207ENST00000439600 CAMTA1Q9Y6Y1 1673 aa14.3□□□□□ -0.12
LMO3-207ENST00000439600 CRYBG1Q9Y4K1 1723 aa14.3□□□□□ -0.12
LMO3-207ENST00000439600 TATP17735 454 aaPredicted RBP14.3□□□□□ -0.12
LMO3-207ENST00000439600 AMOTQ4VCS5 1084 aa14.3□□□□□ -0.12
LMO3-207ENST00000439600 TCP11L2Q8N4U5 519 aa14.3□□□□□ -0.12
LMO3-207ENST00000439600 NGEFQ8N5V2 710 aa14.3□□□□□ -0.12
LMO3-207ENST00000439600 RUNDC1Q96C34 613 aa14.3□□□□□ -0.12
LMO3-207ENST00000439600 QTRT2Q9H974 415 aaKnown RBP14.3□□□□□ -0.12
LMO3-207ENST00000439600 PLEKHG2Q9H7P9 1386 aa14.3□□□□□ -0.12
LMO3-207ENST00000439600 COL3A1P02461 1466 aaPredicted RBP14.3□□□□□ -0.12
LMO3-207ENST00000439600 LRP6O75581 1613 aa14.3□□□□□ -0.12
LMO3-207ENST00000439600 HMOX1P09601 288 aa14.29□□□□□ -0.12
LMO3-207ENST00000439600 SSTR3P32745 418 aaPredicted RBP14.29□□□□□ -0.12
LMO3-207ENST00000439600 PLEKHO1Q53GL0 409 aaPredicted RBP14.29□□□□□ -0.12
LMO3-207ENST00000439600 MAPK8IP3Q9UPT6 1336 aa14.29□□□□□ -0.12
LMO3-207ENST00000439600 MAP2P11137 1827 aaKnown RBP14.28□□□□□ -0.12
LMO3-207ENST00000439600 IL2RBP14784 551 aa14.28□□□□□ -0.12
LMO3-207ENST00000439600 PRKAR2BP31323 418 aa14.28□□□□□ -0.12
LMO3-207ENST00000439600 KDRP35968 1356 aa14.28□□□□□ -0.12
LMO3-207ENST00000439600 SPATA31A1Q5TZJ5 1347 aa14.28□□□□□ -0.12
LMO3-207ENST00000439600 SPATA31A5Q5VU36 1347 aa14.28□□□□□ -0.12
LMO3-207ENST00000439600 SPATA31A7Q8IWB4 1347 aa14.28□□□□□ -0.12
LMO3-207ENST00000439600 RSPH6AQ9H0K4 717 aa14.28□□□□□ -0.12
LMO3-207ENST00000439600 SPG7Q9UQ90 795 aa14.28□□□□□ -0.12
LMO3-207ENST00000439600 SRCAPQ6ZRS2 3230 aa14.28□□□□□ -0.12
LMO3-207ENST00000439600 BCL9LQ86UU0 1499 aa14.27□□□□□ -0.12
LMO3-207ENST00000439600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.27□□□□□ -0.13
LMO3-207ENST00000439600 FAM161AQ3B820 660 aa14.27□□□□□ -0.13
LMO3-207ENST00000439600 GJD4Q96KN9 370 aaPredicted RBP14.27□□□□□ -0.13
LMO3-207ENST00000439600 FAM217BQ9NTX9 383 aaPredicted RBP14.27□□□□□ -0.13
LMO3-207ENST00000439600 USP35Q9P2H5 1018 aa14.27□□□□□ -0.13
LMO3-207ENST00000439600 COL9A1P20849 921 aa14.26□□□□□ -0.13
LMO3-207ENST00000439600 PLEKHF1Q96S99 279 aa14.26□□□□□ -0.13
LMO3-207ENST00000439600 ABCA3Q99758 1704 aa14.26□□□□□ -0.13
LMO3-207ENST00000439600 PEAK1Q9H792 1746 aa14.26□□□□□ -0.13
LMO3-207ENST00000439600 EXOC5O00471 708 aa14.25□□□□□ -0.13
LMO3-207ENST00000439600 ONECUT3O60422 494 aaPredicted RBP14.25□□□□□ -0.13
LMO3-207ENST00000439600 USHBP1Q8N6Y0 703 aa14.25□□□□□ -0.13
LMO3-207ENST00000439600 GAS2L2Q8NHY3 880 aa14.25□□□□□ -0.13
LMO3-207ENST00000439600 LMO7Q8WWI1 1683 aa14.25□□□□□ -0.13
LMO3-207ENST00000439600 LTN1O94822 1766 aa14.24□□□□□ -0.13
LMO3-207ENST00000439600 COL18A1P39060 1754 aa14.24□□□□□ -0.13
LMO3-207ENST00000439600 RBM6P78332 1123 aaKnown RBP14.24□□□□□ -0.13
LMO3-207ENST00000439600 SH3D19Q5HYK7 790 aa14.24□□□□□ -0.13
LMO3-207ENST00000439600 AEBP1Q8IUX7 1158 aa14.24□□□□□ -0.13
LMO3-207ENST00000439600 ZCRB1Q8TBF4 217 aaKnown RBP14.24□□□□□ -0.13
LMO3-207ENST00000439600 OTUD5Q96G74 571 aa14.24□□□□□ -0.13
LMO3-207ENST00000439600 LMOD3Q0VAK6 560 aa14.23□□□□□ -0.13
LMO3-207ENST00000439600 PCMTD1Q96MG8 357 aaPredicted RBP14.23□□□□□ -0.13
LMO3-207ENST00000439600 NCAPD2Q15021 1401 aa14.23□□□□□ -0.13
LMO3-207ENST00000439600 NBPF26B4DH59 902 aa14.22□□□□□ -0.13
LMO3-207ENST00000439600 HTATSF1O43719 755 aaKnown RBP14.22□□□□□ -0.13
LMO3-207ENST00000439600 HSP90AB1P08238 724 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms