RNA–Protein interactions for RNA: ENST00000437316.6

HLA-DQB2-232, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB2, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-232ENST00000437316 INTS5Q6P9B9 1019 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB2-232ENST00000437316 AMIGO3Q86WK7 504 aa18.74■□□□□ 0.59
HLA-DQB2-232ENST00000437316 NLGN1Q8N2Q7 840 aa18.74■□□□□ 0.59
HLA-DQB2-232ENST00000437316 ARHGEF1Q92888 912 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB2-232ENST00000437316 THUMPD2Q9BTF0 503 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB2-232ENST00000437316 FHDC1Q9C0D6 1143 aaPredicted RBP18.74■□□□□ 0.59
HLA-DQB2-232ENST00000437316 A0A087WZG4 1122 aa18.73■□□□□ 0.59
HLA-DQB2-232ENST00000437316 CANXP27824 592 aaKnown RBP18.73■□□□□ 0.59
HLA-DQB2-232ENST00000437316 SMIM5Q71RC9 77 aa18.73■□□□□ 0.59
HLA-DQB2-232ENST00000437316 TSPYL4Q9UJ04 414 aa18.73■□□□□ 0.59
HLA-DQB2-232ENST00000437316 C4AP0C0L4 1744 aa18.73■□□□□ 0.59
HLA-DQB2-232ENST00000437316 SOS1Q07889 1333 aaPredicted RBP18.73■□□□□ 0.59
HLA-DQB2-232ENST00000437316 COL15A1P39059 1388 aa18.72■□□□□ 0.59
HLA-DQB2-232ENST00000437316 KCNQ3O43525 872 aa18.72■□□□□ 0.59
HLA-DQB2-232ENST00000437316 CALD1Q05682 793 aaKnown RBP18.72■□□□□ 0.59
HLA-DQB2-232ENST00000437316 BABAM1Q9NWV8 329 aa18.72■□□□□ 0.59
HLA-DQB2-232ENST00000437316 ZBTB1Q9Y2K1 713 aa18.72■□□□□ 0.59
HLA-DQB2-232ENST00000437316 ZNF330Q9Y3S2 320 aaPredicted RBP18.72■□□□□ 0.59
HLA-DQB2-232ENST00000437316 KDM3BQ7LBC6 1761 aa18.72■□□□□ 0.59
HLA-DQB2-232ENST00000437316 MIS18AQ9NYP9 233 aa18.71■□□□□ 0.59
HLA-DQB2-232ENST00000437316 USP42Q9H9J4 1324 aaKnown RBP18.7■□□□□ 0.58
HLA-DQB2-232ENST00000437316 APAF1O14727 1248 aa18.69■□□□□ 0.58
HLA-DQB2-232ENST00000437316 MMP10P09238 476 aa18.69■□□□□ 0.58
HLA-DQB2-232ENST00000437316 SYT17Q9BSW7 474 aa18.69■□□□□ 0.58
HLA-DQB2-232ENST00000437316 LAMB4A4D0S4 1761 aa18.68■□□□□ 0.58
HLA-DQB2-232ENST00000437316 GYS1P13807 737 aa18.68■□□□□ 0.58
HLA-DQB2-232ENST00000437316 IL6STP40189 918 aaPredicted RBP18.68■□□□□ 0.58
HLA-DQB2-232ENST00000437316 LAS1LQ9Y4W2 734 aaKnown RBP18.68■□□□□ 0.58
HLA-DQB2-232ENST00000437316 PARP3Q9Y6F1 533 aa18.68■□□□□ 0.58
HLA-DQB2-232ENST00000437316 CCDC184Q52MB2 194 aa18.67■□□□□ 0.58
HLA-DQB2-232ENST00000437316 SRP68Q9UHB9 627 aaKnown RBP18.67■□□□□ 0.58
HLA-DQB2-232ENST00000437316 NARFQ9UHQ1 456 aa18.67■□□□□ 0.58
HLA-DQB2-232ENST00000437316 EIF5P55010 431 aaKnown RBP18.66■□□□□ 0.58
HLA-DQB2-232ENST00000437316 EIF4A1P60842 406 aaKnown RBP18.66■□□□□ 0.58
HLA-DQB2-232ENST00000437316 CD2APQ9Y5K6 639 aa18.66■□□□□ 0.58
HLA-DQB2-232ENST00000437316 A1BGP04217 495 aa18.65■□□□□ 0.58
HLA-DQB2-232ENST00000437316 USPL1Q5W0Q7 1092 aa18.65■□□□□ 0.58
HLA-DQB2-232ENST00000437316 TRIM35Q9UPQ4 493 aa18.65■□□□□ 0.58
HLA-DQB2-232ENST00000437316 USP16Q9Y5T5 823 aa18.65■□□□□ 0.58
HLA-DQB2-232ENST00000437316 GIGYF1O75420 1035 aaPredicted RBP18.64■□□□□ 0.57
HLA-DQB2-232ENST00000437316 PRAMEF22A3QJZ6 481 aa18.62■□□□□ 0.57
HLA-DQB2-232ENST00000437316 GNAI1P63096 354 aa18.62■□□□□ 0.57
HLA-DQB2-232ENST00000437316 FKBP8Q14318 412 aa18.62■□□□□ 0.57
HLA-DQB2-232ENST00000437316 FAM9BQ8IZU0 186 aa18.62■□□□□ 0.57
HLA-DQB2-232ENST00000437316 CFAP44Q96MT7 982 aa18.62■□□□□ 0.57
HLA-DQB2-232ENST00000437316 ZNF652Q9Y2D9 606 aa18.62■□□□□ 0.57
HLA-DQB2-232ENST00000437316 SCN7AQ01118 1682 aa18.61■□□□□ 0.57
HLA-DQB2-232ENST00000437316 ERBB4Q15303 1308 aa18.61■□□□□ 0.57
HLA-DQB2-232ENST00000437316 CHL1O00533 1208 aa18.61■□□□□ 0.57
HLA-DQB2-232ENST00000437316 DZIP3Q86Y13 1208 aaKnown RBP18.61■□□□□ 0.57
HLA-DQB2-232ENST00000437316 PELP1Q8IZL8 1130 aaKnown RBP18.61■□□□□ 0.57
HLA-DQB2-232ENST00000437316 GPR162Q16538 588 aa18.6■□□□□ 0.57
HLA-DQB2-232ENST00000437316 IFT57Q9NWB7 429 aa18.6■□□□□ 0.57
HLA-DQB2-232ENST00000437316 TBC1D2BQ9UPU7 963 aa18.6■□□□□ 0.57
HLA-DQB2-232ENST00000437316 NPHP1O15259 732 aa18.59■□□□□ 0.57
HLA-DQB2-232ENST00000437316 PIP4K2AP48426 406 aaPredicted RBP18.58■□□□□ 0.56
HLA-DQB2-232ENST00000437316 CCDC27Q2M243 656 aa18.58■□□□□ 0.56
HLA-DQB2-232ENST00000437316 KIF6Q6ZMV9 814 aa18.58■□□□□ 0.56
HLA-DQB2-232ENST00000437316 NGEFQ8N5V2 710 aa18.58■□□□□ 0.56
HLA-DQB2-232ENST00000437316 NLGN2Q8NFZ4 835 aa18.58■□□□□ 0.56
HLA-DQB2-232ENST00000437316 CHMP4AQ9BY43 222 aa18.58■□□□□ 0.56
HLA-DQB2-232ENST00000437316 C10orf71Q711Q0 1435 aa18.57■□□□□ 0.56
HLA-DQB2-232ENST00000437316 HOXB7P09629 217 aa18.57■□□□□ 0.56
HLA-DQB2-232ENST00000437316 EIF2S2P20042 333 aaKnown RBP18.57■□□□□ 0.56
HLA-DQB2-232ENST00000437316 NCBP3Q53F19 620 aaKnown RBP18.57■□□□□ 0.56
HLA-DQB2-232ENST00000437316 BCORQ6W2J9 1755 aa18.56■□□□□ 0.56
HLA-DQB2-232ENST00000437316 RGL2O15211 777 aa18.56■□□□□ 0.56
HLA-DQB2-232ENST00000437316 NFIXQ14938 502 aa18.56■□□□□ 0.56
HLA-DQB2-232ENST00000437316 BICDL1Q6ZP65 573 aa18.56■□□□□ 0.56
HLA-DQB2-232ENST00000437316 MBIPQ9NS73 344 aa18.56■□□□□ 0.56
HLA-DQB2-232ENST00000437316 CARMIL3Q8ND23 1372 aa18.55■□□□□ 0.56
HLA-DQB2-232ENST00000437316 NBPF26B4DH59 902 aa18.55■□□□□ 0.56
HLA-DQB2-232ENST00000437316 POLRMTO00411 1230 aaKnown RBP18.55■□□□□ 0.56
HLA-DQB2-232ENST00000437316 CAMTA2O94983 1202 aa18.55■□□□□ 0.56
HLA-DQB2-232ENST00000437316 MYL6BP14649 208 aa18.55■□□□□ 0.56
HLA-DQB2-232ENST00000437316 TM4SF1P30408 202 aa18.55■□□□□ 0.56
HLA-DQB2-232ENST00000437316 DDR1Q08345 913 aa18.55■□□□□ 0.56
HLA-DQB2-232ENST00000437316 NBPF10Q6P3W6 841 aaKnown RBP18.55■□□□□ 0.56
HLA-DQB2-232ENST00000437316 CLEC4GQ6UXB4 293 aa18.55■□□□□ 0.56
HLA-DQB2-232ENST00000437316 NBPF15Q8N660 670 aa18.55■□□□□ 0.56
HLA-DQB2-232ENST00000437316 SETDB2Q96T68 719 aa18.55■□□□□ 0.56
HLA-DQB2-232ENST00000437316 KIF13BQ9NQT8 1826 aa18.55■□□□□ 0.56
HLA-DQB2-232ENST00000437316 CCER2I3L3R5 266 aa18.54■□□□□ 0.56
HLA-DQB2-232ENST00000437316 TGFB2P61812 414 aa18.54■□□□□ 0.56
HLA-DQB2-232ENST00000437316 BCL2L12Q9HB09 334 aa18.54■□□□□ 0.56
HLA-DQB2-232ENST00000437316 GRIN3BO60391 1043 aa18.53■□□□□ 0.56
HLA-DQB2-232ENST00000437316 SERPINB2P05120 415 aa18.53■□□□□ 0.56
HLA-DQB2-232ENST00000437316 HDGFL1Q5TGJ6 251 aa18.53■□□□□ 0.56
HLA-DQB2-232ENST00000437316 WWC1Q8IX03 1113 aa18.53■□□□□ 0.56
HLA-DQB2-232ENST00000437316 IL16Q14005 1332 aa18.52■□□□□ 0.56
HLA-DQB2-232ENST00000437316 ZNF853P0CG23 659 aa18.52■□□□□ 0.56
HLA-DQB2-232ENST00000437316 TBC1D9BQ66K14 1250 aa18.52■□□□□ 0.56
HLA-DQB2-232ENST00000437316 DIEXFQ68CQ4 756 aaKnown RBP18.52■□□□□ 0.56
HLA-DQB2-232ENST00000437316 ERVV-1B6SEH8 477 aa18.51■□□□□ 0.55
HLA-DQB2-232ENST00000437316 DUSP27Q5VZP5 1158 aa18.51■□□□□ 0.55
HLA-DQB2-232ENST00000437316 CNBD1Q8NA66 436 aa18.51■□□□□ 0.55
HLA-DQB2-232ENST00000437316 NECTIN2Q92692 538 aa18.51■□□□□ 0.55
HLA-DQB2-232ENST00000437316 SALL2Q9Y467 1007 aaPredicted RBP18.51■□□□□ 0.55
HLA-DQB2-232ENST00000437316 AFDNP55196 1824 aaKnown RBP18.51■□□□□ 0.55
HLA-DQB2-232ENST00000437316 MAP3K15Q6ZN16 1313 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms