RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 PHRF1Q9P1Y6 1649 aaKnown RBP12.3□□□□□ -0.44
NIF3L1-208ENST00000436412 PLEKHG3A1L390 1219 aa12.3□□□□□ -0.44
NIF3L1-208ENST00000436412 PLSCR1O15162 318 aa12.3□□□□□ -0.44
NIF3L1-208ENST00000436412 NUTM2GQ5VZR2 741 aa12.3□□□□□ -0.44
NIF3L1-208ENST00000436412 CAMTA1Q9Y6Y1 1673 aa12.29□□□□□ -0.44
NIF3L1-208ENST00000436412 GNPATO15228 680 aa12.29□□□□□ -0.44
NIF3L1-208ENST00000436412 ABTB2Q8N961 1025 aa12.29□□□□□ -0.44
NIF3L1-208ENST00000436412 DCAF11Q8TEB1 546 aa12.29□□□□□ -0.44
NIF3L1-208ENST00000436412 USP19O94966 1318 aa12.29□□□□□ -0.44
NIF3L1-208ENST00000436412 ACEP12821 1306 aa12.29□□□□□ -0.44
NIF3L1-208ENST00000436412 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.28□□□□□ -0.44
NIF3L1-208ENST00000436412 METTL3Q86U44 580 aaKnown RBP12.28□□□□□ -0.44
NIF3L1-208ENST00000436412 NLRP13Q86W25 1043 aa12.28□□□□□ -0.44
NIF3L1-208ENST00000436412 CDK19Q9BWU1 502 aa12.28□□□□□ -0.44
NIF3L1-208ENST00000436412 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
NIF3L1-208ENST00000436412 OVOS2A0A0J9YW53 1432 aa12.28□□□□□ -0.44
NIF3L1-208ENST00000436412 OVOS2Q6IE36 1432 aa12.28□□□□□ -0.44
NIF3L1-208ENST00000436412 OATP04181 439 aa12.27□□□□□ -0.45
NIF3L1-208ENST00000436412 PARP4Q9UKK3 1724 aaKnown RBP12.27□□□□□ -0.45
NIF3L1-208ENST00000436412 RGPD3A6NKT7 1758 aaPredicted RBP12.27□□□□□ -0.45
NIF3L1-208ENST00000436412 RGPD4Q7Z3J3 1758 aa12.27□□□□□ -0.45
NIF3L1-208ENST00000436412 BRD4O60885 1362 aaPredicted RBP12.27□□□□□ -0.45
NIF3L1-208ENST00000436412 LMO7Q8WWI1 1683 aa12.26□□□□□ -0.45
NIF3L1-208ENST00000436412 GCP02774 474 aa12.26□□□□□ -0.45
NIF3L1-208ENST00000436412 SLC10A3P09131 477 aa12.26□□□□□ -0.45
NIF3L1-208ENST00000436412 NKX2-3Q8TAU0 364 aa12.26□□□□□ -0.45
NIF3L1-208ENST00000436412 NRKQ7Z2Y5 1582 aa12.26□□□□□ -0.45
NIF3L1-208ENST00000436412 SLC4A3P48751 1232 aa12.25□□□□□ -0.45
NIF3L1-208ENST00000436412 COPS2P61201 443 aa12.25□□□□□ -0.45
NIF3L1-208ENST00000436412 CRB1P82279 1406 aa12.25□□□□□ -0.45
NIF3L1-208ENST00000436412 COL5A2P05997 1499 aaPredicted RBP12.25□□□□□ -0.45
NIF3L1-208ENST00000436412 ARHGEF28Q8N1W1 1705 aaKnown RBP12.25□□□□□ -0.45
NIF3L1-208ENST00000436412 DDB1Q16531 1140 aa12.24□□□□□ -0.45
NIF3L1-208ENST00000436412 CDCA7Q9BWT1 371 aaPredicted RBP12.24□□□□□ -0.45
NIF3L1-208ENST00000436412 TOPAZ1Q8N9V7 1692 aa12.23□□□□□ -0.45
NIF3L1-208ENST00000436412 BCL9O00512 1426 aa12.23□□□□□ -0.45
NIF3L1-208ENST00000436412 AATKQ6ZMQ8 1374 aa12.23□□□□□ -0.45
NIF3L1-208ENST00000436412 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
NIF3L1-208ENST00000436412 CEP350Q5VT06 3117 aa12.23□□□□□ -0.45
NIF3L1-208ENST00000436412 SBF2Q86WG5 1849 aa12.23□□□□□ -0.45
NIF3L1-208ENST00000436412 PEAK1Q9H792 1746 aa12.23□□□□□ -0.45
NIF3L1-208ENST00000436412 PPP1R18Q6NYC8 613 aa12.22□□□□□ -0.45
NIF3L1-208ENST00000436412 GOLGB1Q14789 3259 aaKnown RBP12.21□□□□□ -0.45
NIF3L1-208ENST00000436412 CASZ1Q86V15 1759 aa12.21□□□□□ -0.45
NIF3L1-208ENST00000436412 BLOC1S3Q6QNY0 202 aa12.21□□□□□ -0.45
NIF3L1-208ENST00000436412 GPIHBP1Q8IV16 184 aa12.21□□□□□ -0.45
NIF3L1-208ENST00000436412 PHOX2BQ99453 314 aa12.21□□□□□ -0.45
NIF3L1-208ENST00000436412 PRR14Q9BWN1 585 aa12.21□□□□□ -0.45
NIF3L1-208ENST00000436412 RAB3GAP2Q9H2M9 1393 aa12.2□□□□□ -0.46
NIF3L1-208ENST00000436412 CHD4Q14839 1912 aa12.2□□□□□ -0.46
NIF3L1-208ENST00000436412 ACTN4O43707 911 aaKnown RBP12.2□□□□□ -0.46
NIF3L1-208ENST00000436412 ZPR1O75312 459 aa12.2□□□□□ -0.46
NIF3L1-208ENST00000436412 CFHP08603 1231 aa12.2□□□□□ -0.46
NIF3L1-208ENST00000436412 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
NIF3L1-208ENST00000436412 STK32BQ9NY57 414 aa12.2□□□□□ -0.46
NIF3L1-208ENST00000436412 PCDHB3Q9Y5E6 796 aa12.2□□□□□ -0.46
NIF3L1-208ENST00000436412 ZBTB7AO95365 584 aa12.19□□□□□ -0.46
NIF3L1-208ENST00000436412 SYT17Q9BSW7 474 aa12.19□□□□□ -0.46
NIF3L1-208ENST00000436412 PPIP5K1Q6PFW1 1433 aa12.19□□□□□ -0.46
NIF3L1-208ENST00000436412 WDR17Q8IZU2 1322 aa12.18□□□□□ -0.46
NIF3L1-208ENST00000436412 SRPK2P78362 688 aaKnown RBP12.18□□□□□ -0.46
NIF3L1-208ENST00000436412 SLC15A2Q16348 729 aa12.18□□□□□ -0.46
NIF3L1-208ENST00000436412 TXNRD1Q16881 649 aa12.18□□□□□ -0.46
NIF3L1-208ENST00000436412 MARCH10Q8NA82 808 aaPredicted RBP12.18□□□□□ -0.46
NIF3L1-208ENST00000436412 IRX2Q9BZI1 471 aaPredicted RBP12.18□□□□□ -0.46
NIF3L1-208ENST00000436412 MTFR1LQ9H019 292 aa12.18□□□□□ -0.46
NIF3L1-208ENST00000436412 LRRC37A3O60309 1634 aa12.18□□□□□ -0.46
NIF3L1-208ENST00000436412 NLRP7Q8WX94 980 aa12.17□□□□□ -0.46
NIF3L1-208ENST00000436412 FHDC1Q9C0D6 1143 aaPredicted RBP12.17□□□□□ -0.46
NIF3L1-208ENST00000436412 PDGFDQ9GZP0 370 aaPredicted RBP12.17□□□□□ -0.46
NIF3L1-208ENST00000436412 KIAA1210Q9ULL0 1709 aa12.17□□□□□ -0.46
NIF3L1-208ENST00000436412 ZBTB7CA1YPR0 619 aa12.16□□□□□ -0.46
NIF3L1-208ENST00000436412 PTF1AQ7RTS3 328 aa12.16□□□□□ -0.46
NIF3L1-208ENST00000436412 CARD10Q9BWT7 1032 aa12.16□□□□□ -0.46
NIF3L1-208ENST00000436412 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.16□□□□□ -0.46
NIF3L1-208ENST00000436412 SLIT3O75094 1523 aa12.16□□□□□ -0.46
NIF3L1-208ENST00000436412 MYOM1P52179 1685 aa12.16□□□□□ -0.46
NIF3L1-208ENST00000436412 CENPJQ9HC77 1338 aaPredicted RBP12.15□□□□□ -0.46
NIF3L1-208ENST00000436412 USP6P35125 1406 aa12.15□□□□□ -0.46
NIF3L1-208ENST00000436412 SENP3-EIF4A1A0A087X0R7 540 aa12.15□□□□□ -0.46
NIF3L1-208ENST00000436412 EXOC5O00471 708 aa12.15□□□□□ -0.46
NIF3L1-208ENST00000436412 C1QTNF8P60827 252 aa12.15□□□□□ -0.46
NIF3L1-208ENST00000436412 KMT5BQ4FZB7 885 aa12.15□□□□□ -0.46
NIF3L1-208ENST00000436412 MAP3K5Q99683 1374 aa12.15□□□□□ -0.46
NIF3L1-208ENST00000436412 KCNH5Q8NCM2 988 aa12.14□□□□□ -0.47
NIF3L1-208ENST00000436412 CABP1Q9NZU7 370 aa12.14□□□□□ -0.47
NIF3L1-208ENST00000436412 DAXXQ9UER7 740 aaPredicted RBP12.14□□□□□ -0.47
NIF3L1-208ENST00000436412 COL18A1P39060 1754 aa12.14□□□□□ -0.47
NIF3L1-208ENST00000436412 AKAP12Q02952 1782 aa12.14□□□□□ -0.47
NIF3L1-208ENST00000436412 TLL1O43897 1013 aa12.13□□□□□ -0.47
NIF3L1-208ENST00000436412 ARHGEF25Q86VW2 580 aa12.13□□□□□ -0.47
NIF3L1-208ENST00000436412 ARXQ96QS3 562 aa12.13□□□□□ -0.47
NIF3L1-208ENST00000436412 KAT6BQ8WYB5 2073 aa12.13□□□□□ -0.47
NIF3L1-208ENST00000436412 CCDC7Q96M83 1385 aa12.13□□□□□ -0.47
NIF3L1-208ENST00000436412 WNK3Q9BYP7 1800 aa12.13□□□□□ -0.47
NIF3L1-208ENST00000436412 CPSF1Q10570 1443 aaKnown RBP12.12□□□□□ -0.47
NIF3L1-208ENST00000436412 CSB-PGBD3P0DP91 1061 aa12.12□□□□□ -0.47
NIF3L1-208ENST00000436412 NBPF1Q3BBV0 1214 aa12.12□□□□□ -0.47
NIF3L1-208ENST00000436412 PRKD2Q9BZL6 878 aa12.11□□□□□ -0.47
NIF3L1-208ENST00000436412 TTC21AQ8NDW8 1320 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms