RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 CCDC155Q8N6L0 562 aa10.33□□□□□ -0.76
HDAC9-213ENST00000433709 SCG3Q8WXD2 468 aaKnown RBP10.33□□□□□ -0.76
HDAC9-213ENST00000433709 NIFKQ9BYG3 293 aaKnown RBP10.33□□□□□ -0.76
HDAC9-213ENST00000433709 TIMMDC1Q9NPL8 285 aa10.33□□□□□ -0.76
HDAC9-213ENST00000433709 C21orf2O43822 256 aa10.32□□□□□ -0.76
HDAC9-213ENST00000433709 VEGFBP49765 207 aa10.32□□□□□ -0.76
HDAC9-213ENST00000433709 ZDHHC1Q8WTX9 485 aa10.32□□□□□ -0.76
HDAC9-213ENST00000433709 ATAD2Q6PL18 1390 aa10.31□□□□□ -0.76
HDAC9-213ENST00000433709 CARNS1A5YM72 827 aa10.31□□□□□ -0.76
HDAC9-213ENST00000433709 NXF1Q9UBU9 619 aaKnown RBP10.31□□□□□ -0.76
HDAC9-213ENST00000433709 PPFIA3O75145 1194 aa10.3□□□□□ -0.76
HDAC9-213ENST00000433709 AIDAQ96BJ3 306 aa10.3□□□□□ -0.76
HDAC9-213ENST00000433709 PRIMPOLQ96LW4 560 aa10.3□□□□□ -0.76
HDAC9-213ENST00000433709 DYRK1BQ9Y463 629 aa10.3□□□□□ -0.76
HDAC9-213ENST00000433709 PPP1R12BO60237 982 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-213ENST00000433709 CSB-PGBD3P0DP91 1061 aa10.29□□□□□ -0.76
HDAC9-213ENST00000433709 NOS2P35228 1153 aa10.29□□□□□ -0.76
HDAC9-213ENST00000433709 TEAD4Q15561 434 aa10.29□□□□□ -0.76
HDAC9-213ENST00000433709 SWI5Q1ZZU3 235 aa10.29□□□□□ -0.76
HDAC9-213ENST00000433709 SH3PXD2AQ5TCZ1 1133 aa10.29□□□□□ -0.76
HDAC9-213ENST00000433709 CHMP7Q8WUX9 453 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-213ENST00000433709 L3MBTL2Q969R5 705 aa10.29□□□□□ -0.76
HDAC9-213ENST00000433709 GAS2L1Q99501 681 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-213ENST00000433709 SLAIN2Q9P270 581 aa10.29□□□□□ -0.76
HDAC9-213ENST00000433709 TMEM88BA6NKF7 163 aa10.28□□□□□ -0.76
HDAC9-213ENST00000433709 PRMT3O60678 531 aa10.28□□□□□ -0.76
HDAC9-213ENST00000433709 WEE1P30291 646 aa10.28□□□□□ -0.76
HDAC9-213ENST00000433709 ZNF775Q96BV0 537 aaPredicted RBP10.28□□□□□ -0.76
HDAC9-213ENST00000433709 ZNF232Q9UNY5 417 aa10.28□□□□□ -0.76
HDAC9-213ENST00000433709 SERTM1A2A2V5 107 aa10.27□□□□□ -0.77
HDAC9-213ENST00000433709 MSX1P28360 303 aa10.27□□□□□ -0.77
HDAC9-213ENST00000433709 PSMA6P60900 246 aaKnown RBP10.27□□□□□ -0.77
HDAC9-213ENST00000433709 GPAMQ9HCL2 828 aa10.27□□□□□ -0.77
HDAC9-213ENST00000433709 CUEDC1Q9NWM3 386 aaPredicted RBP10.27□□□□□ -0.77
HDAC9-213ENST00000433709 A0A1B0GTH6 734 aa10.26□□□□□ -0.77
HDAC9-213ENST00000433709 EML1O00423 815 aa10.26□□□□□ -0.77
HDAC9-213ENST00000433709 TERTO14746 1132 aaKnown RBP10.26□□□□□ -0.77
HDAC9-213ENST00000433709 IGFBP4P22692 258 aa10.26□□□□□ -0.77
HDAC9-213ENST00000433709 TXLNAP40222 546 aa10.26□□□□□ -0.77
HDAC9-213ENST00000433709 RIPOR1Q6ZS17 1223 aa10.26□□□□□ -0.77
HDAC9-213ENST00000433709 F11P03951 625 aa10.25□□□□□ -0.77
HDAC9-213ENST00000433709 ITGA6P23229 1130 aa10.25□□□□□ -0.77
HDAC9-213ENST00000433709 OCLNQ16625 522 aa10.25□□□□□ -0.77
HDAC9-213ENST00000433709 RETREG2Q8NC44 543 aa10.25□□□□□ -0.77
HDAC9-213ENST00000433709 CLP1Q92989 425 aaKnown RBP10.25□□□□□ -0.77
HDAC9-213ENST00000433709 C2orf49Q9BVC5 232 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-213ENST00000433709 HCN4Q9Y3Q4 1203 aa10.25□□□□□ -0.77
HDAC9-213ENST00000433709 H3BM21 787 aa10.24□□□□□ -0.77
HDAC9-213ENST00000433709 RUBCNLQ9H714 662 aa10.24□□□□□ -0.77
HDAC9-213ENST00000433709 CHMP3Q9Y3E7 222 aa10.24□□□□□ -0.77
HDAC9-213ENST00000433709 ATP4AP20648 1035 aa10.23□□□□□ -0.77
HDAC9-213ENST00000433709 NBPF1Q3BBV0 1214 aa10.23□□□□□ -0.77
HDAC9-213ENST00000433709 POTEAQ6S8J7 498 aa10.23□□□□□ -0.77
HDAC9-213ENST00000433709 STAG2Q8N3U4 1231 aa10.23□□□□□ -0.77
HDAC9-213ENST00000433709 FKBP5Q13451 457 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-213ENST00000433709 DBN1Q16643 649 aa10.22□□□□□ -0.77
HDAC9-213ENST00000433709 VWA5B2Q8N398 1253 aa10.22□□□□□ -0.77
HDAC9-213ENST00000433709 ZDHHC3Q9NYG2 299 aa10.22□□□□□ -0.77
HDAC9-213ENST00000433709 HIRAP54198 1017 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-213ENST00000433709 NFX1Q12986 1120 aaKnown RBP10.21□□□□□ -0.77
HDAC9-213ENST00000433709 NPAS3Q8IXF0 933 aa10.21□□□□□ -0.77
HDAC9-213ENST00000433709 CXXC1Q9P0U4 656 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-213ENST00000433709 CDC14CA4D256 554 aa10.2□□□□□ -0.78
HDAC9-213ENST00000433709 TATP17735 454 aaPredicted RBP10.2□□□□□ -0.78
HDAC9-213ENST00000433709 ATP2B4P23634 1241 aa10.2□□□□□ -0.78
HDAC9-213ENST00000433709 ARSJQ5FYB0 599 aaPredicted RBP10.2□□□□□ -0.78
HDAC9-213ENST00000433709 TRIM22Q8IYM9 498 aa10.2□□□□□ -0.78
HDAC9-213ENST00000433709 C1orf216Q8TAB5 229 aa10.2□□□□□ -0.78
HDAC9-213ENST00000433709 C7orf43Q8WVR3 580 aa10.2□□□□□ -0.78
HDAC9-213ENST00000433709 KLRG1Q96E93 195 aa10.2□□□□□ -0.78
HDAC9-213ENST00000433709 NGLY1Q96IV0 654 aa10.2□□□□□ -0.78
HDAC9-213ENST00000433709 PHACTR1Q9C0D0 580 aa10.2□□□□□ -0.78
HDAC9-213ENST00000433709 ERBB4Q15303 1308 aa10.19□□□□□ -0.78
HDAC9-213ENST00000433709 FOXO3O43524 673 aa10.19□□□□□ -0.78
HDAC9-213ENST00000433709 THBS1P07996 1170 aa10.19□□□□□ -0.78
HDAC9-213ENST00000433709 PGBD3Q8N328 593 aa10.19□□□□□ -0.78
HDAC9-213ENST00000433709 ZNF837Q96EG3 531 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-213ENST00000433709 ZIC5Q96T25 663 aa10.19□□□□□ -0.78
HDAC9-213ENST00000433709 USTQ9Y2C2 406 aa10.19□□□□□ -0.78
HDAC9-213ENST00000433709 A0A1W2PNR3 127 aa10.18□□□□□ -0.78
HDAC9-213ENST00000433709 LCE2CQ5TA81 110 aa10.18□□□□□ -0.78
HDAC9-213ENST00000433709 BICDL1Q6ZP65 573 aa10.18□□□□□ -0.78
HDAC9-213ENST00000433709 CAPN12Q6ZSI9 719 aa10.18□□□□□ -0.78
HDAC9-213ENST00000433709 ALDH16A1Q8IZ83 802 aa10.18□□□□□ -0.78
HDAC9-213ENST00000433709 SLC16A10Q8TF71 515 aa10.18□□□□□ -0.78
HDAC9-213ENST00000433709 NANOS1Q8WY41 292 aaKnown RBP10.18□□□□□ -0.78
HDAC9-213ENST00000433709 MKNK1Q9BUB5 465 aa10.18□□□□□ -0.78
HDAC9-213ENST00000433709 NUCKS1Q9H1E3 243 aaKnown RBP10.18□□□□□ -0.78
HDAC9-213ENST00000433709 CRISPLD1Q9H336 500 aa10.18□□□□□ -0.78
HDAC9-213ENST00000433709 NCAPD3P42695 1498 aa10.17□□□□□ -0.78
HDAC9-213ENST00000433709 H7C1W4 665 aa10.17□□□□□ -0.78
HDAC9-213ENST00000433709 SCNN1AP37088 669 aa10.17□□□□□ -0.78
HDAC9-213ENST00000433709 C1orf53Q5VUE5 145 aa10.17□□□□□ -0.78
HDAC9-213ENST00000433709 SV2AQ7L0J3 742 aa10.17□□□□□ -0.78
HDAC9-213ENST00000433709 GPR161Q8N6U8 529 aaKnown RBP10.17□□□□□ -0.78
HDAC9-213ENST00000433709 VTI1AQ96AJ9 217 aa10.17□□□□□ -0.78
HDAC9-213ENST00000433709 WFS1O76024 890 aa10.16□□□□□ -0.78
HDAC9-213ENST00000433709 SSFA2P28290 1259 aa10.16□□□□□ -0.78
HDAC9-213ENST00000433709 GTPBP3Q969Y2 492 aaKnown RBP10.16□□□□□ -0.78
HDAC9-213ENST00000433709 SMARCA2P51531 1590 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms