RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 APAF1O14727 1248 aa24.9■■□□□ 1.58
RPUSD3-207ENST00000433555 LMOD3Q0VAK6 560 aa24.9■■□□□ 1.58
RPUSD3-207ENST00000433555 SOS1Q07889 1333 aaPredicted RBP24.89■■□□□ 1.58
RPUSD3-207ENST00000433555 SENP3-EIF4A1A0A087X0R7 540 aa24.89■■□□□ 1.58
RPUSD3-207ENST00000433555 BCORQ6W2J9 1755 aa24.89■■□□□ 1.57
RPUSD3-207ENST00000433555 ARHGEF1Q92888 912 aaKnown RBP24.87■■□□□ 1.57
RPUSD3-207ENST00000433555 COL15A1P39059 1388 aa24.87■■□□□ 1.57
RPUSD3-207ENST00000433555 ADRA2BP18089 450 aa24.86■■□□□ 1.57
RPUSD3-207ENST00000433555 PPP1R1BQ9UD71 204 aaPredicted RBP24.86■■□□□ 1.57
RPUSD3-207ENST00000433555 TRAPPC3LQ5T215 181 aa24.85■■□□□ 1.57
RPUSD3-207ENST00000433555 SRP68Q9UHB9 627 aaKnown RBP24.84■■□□□ 1.57
RPUSD3-207ENST00000433555 USP16Q9Y5T5 823 aa24.84■■□□□ 1.57
RPUSD3-207ENST00000433555 CANXP27824 592 aaKnown RBP24.83■■□□□ 1.57
RPUSD3-207ENST00000433555 EIF4A1P60842 406 aaKnown RBP24.83■■□□□ 1.57
RPUSD3-207ENST00000433555 TSPYL4Q9UJ04 414 aa24.83■■□□□ 1.57
RPUSD3-207ENST00000433555 USP42Q9H9J4 1324 aaKnown RBP24.83■■□□□ 1.56
RPUSD3-207ENST00000433555 SNRPA1P09661 255 aaKnown RBP24.82■■□□□ 1.56
RPUSD3-207ENST00000433555 ARXQ96QS3 562 aa24.82■■□□□ 1.56
RPUSD3-207ENST00000433555 STARD3NLO95772 234 aa24.81■■□□□ 1.56
RPUSD3-207ENST00000433555 A1BGP04217 495 aa24.81■■□□□ 1.56
RPUSD3-207ENST00000433555 GYS1P13807 737 aa24.81■■□□□ 1.56
RPUSD3-207ENST00000433555 POLD1P28340 1107 aa24.81■■□□□ 1.56
RPUSD3-207ENST00000433555 PIP4K2AP48426 406 aaPredicted RBP24.81■■□□□ 1.56
RPUSD3-207ENST00000433555 KIAA1551Q9HCM1 1747 aa24.81■■□□□ 1.56
RPUSD3-207ENST00000433555 KIF13BQ9NQT8 1826 aa24.8■■□□□ 1.56
RPUSD3-207ENST00000433555 RFC4P35249 363 aa24.8■■□□□ 1.56
RPUSD3-207ENST00000433555 TEX13AQ9BXU3 409 aaPredicted RBP24.8■■□□□ 1.56
RPUSD3-207ENST00000433555 FHDC1Q9C0D6 1143 aaPredicted RBP24.8■■□□□ 1.56
RPUSD3-207ENST00000433555 FAM9BQ8IZU0 186 aa24.79■■□□□ 1.56
RPUSD3-207ENST00000433555 AFDNP55196 1824 aaKnown RBP24.79■■□□□ 1.56
RPUSD3-207ENST00000433555 GIGYF1O75420 1035 aaPredicted RBP24.78■■□□□ 1.56
RPUSD3-207ENST00000433555 EIF5P55010 431 aaKnown RBP24.78■■□□□ 1.56
RPUSD3-207ENST00000433555 NBPF26B4DH59 902 aa24.77■■□□□ 1.56
RPUSD3-207ENST00000433555 CHL1O00533 1208 aa24.77■■□□□ 1.56
RPUSD3-207ENST00000433555 NBPF10Q6P3W6 841 aaKnown RBP24.77■■□□□ 1.56
RPUSD3-207ENST00000433555 NBPF15Q8N660 670 aa24.77■■□□□ 1.56
RPUSD3-207ENST00000433555 BABAM1Q9NWV8 329 aa24.77■■□□□ 1.56
RPUSD3-207ENST00000433555 KRT24Q2M2I5 525 aa24.76■■□□□ 1.55
RPUSD3-207ENST00000433555 LAS1LQ9Y4W2 734 aaKnown RBP24.76■■□□□ 1.55
RPUSD3-207ENST00000433555 NRXN2Q9P2S2 1712 aa24.75■■□□□ 1.55
RPUSD3-207ENST00000433555 FKBP8Q14318 412 aa24.75■■□□□ 1.55
RPUSD3-207ENST00000433555 USPL1Q5W0Q7 1092 aa24.75■■□□□ 1.55
RPUSD3-207ENST00000433555 BCL2L12Q9HB09 334 aa24.75■■□□□ 1.55
RPUSD3-207ENST00000433555 ZNF330Q9Y3S2 320 aaPredicted RBP24.75■■□□□ 1.55
RPUSD3-207ENST00000433555 MMP10P09238 476 aa24.74■■□□□ 1.55
RPUSD3-207ENST00000433555 IL6STP40189 918 aaPredicted RBP24.74■■□□□ 1.55
RPUSD3-207ENST00000433555 KLHL34Q8N239 644 aa24.74■■□□□ 1.55
RPUSD3-207ENST00000433555 NARFQ9UHQ1 456 aa24.74■■□□□ 1.55
RPUSD3-207ENST00000433555 ZNF853P0CG23 659 aa24.73■■□□□ 1.55
RPUSD3-207ENST00000433555 SYT17Q9BSW7 474 aa24.73■■□□□ 1.55
RPUSD3-207ENST00000433555 MBIPQ9NS73 344 aa24.73■■□□□ 1.55
RPUSD3-207ENST00000433555 CFAP44Q96MT7 982 aa24.72■■□□□ 1.55
RPUSD3-207ENST00000433555 DDR1Q08345 913 aa24.71■■□□□ 1.55
RPUSD3-207ENST00000433555 DIEXFQ68CQ4 756 aaKnown RBP24.71■■□□□ 1.55
RPUSD3-207ENST00000433555 NLGN2Q8NFZ4 835 aa24.71■■□□□ 1.55
RPUSD3-207ENST00000433555 N4BP2Q86UW6 1770 aaPredicted RBP24.71■■□□□ 1.55
RPUSD3-207ENST00000433555 C10orf71Q711Q0 1435 aa24.7■■□□□ 1.55
RPUSD3-207ENST00000433555 CCDC27Q2M243 656 aa24.7■■□□□ 1.54
RPUSD3-207ENST00000433555 WWC1Q8IX03 1113 aa24.7■■□□□ 1.54
RPUSD3-207ENST00000433555 NLGN1Q8N2Q7 840 aa24.7■■□□□ 1.54
RPUSD3-207ENST00000433555 IFT57Q9NWB7 429 aa24.7■■□□□ 1.54
RPUSD3-207ENST00000433555 TBC1D2BQ9UPU7 963 aa24.7■■□□□ 1.54
RPUSD3-207ENST00000433555 CCER2I3L3R5 266 aa24.69■■□□□ 1.54
RPUSD3-207ENST00000433555 ZPR1O75312 459 aa24.69■■□□□ 1.54
RPUSD3-207ENST00000433555 NUP98P52948 1817 aa24.69■■□□□ 1.54
RPUSD3-207ENST00000433555 A0A087WZG4 1122 aa24.68■■□□□ 1.54
RPUSD3-207ENST00000433555 SALL2Q9Y467 1007 aaPredicted RBP24.68■■□□□ 1.54
RPUSD3-207ENST00000433555 BRCA1P38398 1863 aaKnown RBP24.67■■□□□ 1.54
RPUSD3-207ENST00000433555 CAMTA2O94983 1202 aa24.67■■□□□ 1.54
RPUSD3-207ENST00000433555 ANKRD31Q8N7Z5 1873 aa24.66■■□□□ 1.54
RPUSD3-207ENST00000433555 GNAI1P63096 354 aa24.66■■□□□ 1.54
RPUSD3-207ENST00000433555 DZIP3Q86Y13 1208 aaKnown RBP24.66■■□□□ 1.54
RPUSD3-207ENST00000433555 TM4SF1P30408 202 aa24.65■■□□□ 1.54
RPUSD3-207ENST00000433555 CALD1Q05682 793 aaKnown RBP24.65■■□□□ 1.54
RPUSD3-207ENST00000433555 NFIXQ14938 502 aa24.65■■□□□ 1.54
RPUSD3-207ENST00000433555 PROSER3Q2NL68 480 aa24.65■■□□□ 1.54
RPUSD3-207ENST00000433555 MIER1Q8N108 512 aa24.65■■□□□ 1.54
RPUSD3-207ENST00000433555 ANKRD36CQ5JPF3 1778 aa24.65■■□□□ 1.54
RPUSD3-207ENST00000433555 POLRMTO00411 1230 aaKnown RBP24.64■■□□□ 1.54
RPUSD3-207ENST00000433555 EIF2S2P20042 333 aaKnown RBP24.64■■□□□ 1.54
RPUSD3-207ENST00000433555 PDIA6Q15084 440 aa24.64■■□□□ 1.54
RPUSD3-207ENST00000433555 NCBP3Q53F19 620 aaKnown RBP24.64■■□□□ 1.54
RPUSD3-207ENST00000433555 LRP10Q7Z4F1 713 aa24.64■■□□□ 1.54
RPUSD3-207ENST00000433555 NECTIN2Q92692 538 aa24.64■■□□□ 1.54
RPUSD3-207ENST00000433555 PXDNLA1KZ92 1463 aa24.64■■□□□ 1.53
RPUSD3-207ENST00000433555 ANXA1P04083 346 aa24.63■■□□□ 1.53
RPUSD3-207ENST00000433555 MYL6BP14649 208 aa24.63■■□□□ 1.53
RPUSD3-207ENST00000433555 TSR2Q969E8 191 aaKnown RBP24.63■■□□□ 1.53
RPUSD3-207ENST00000433555 ERBB4Q15303 1308 aa24.62■■□□□ 1.53
RPUSD3-207ENST00000433555 DLEC1Q9Y238 1755 aa24.62■■□□□ 1.53
RPUSD3-207ENST00000433555 COL11A2P13942 1736 aaPredicted RBP24.62■■□□□ 1.53
RPUSD3-207ENST00000433555 TBC1D9BQ66K14 1250 aa24.62■■□□□ 1.53
RPUSD3-207ENST00000433555 PARP3Q9Y6F1 533 aa24.62■■□□□ 1.53
RPUSD3-207ENST00000433555 DUSP27Q5VZP5 1158 aa24.61■■□□□ 1.53
RPUSD3-207ENST00000433555 NGEFQ8N5V2 710 aa24.61■■□□□ 1.53
RPUSD3-207ENST00000433555 CD2APQ9Y5K6 639 aa24.61■■□□□ 1.53
RPUSD3-207ENST00000433555 CARMIL3Q8ND23 1372 aa24.61■■□□□ 1.53
RPUSD3-207ENST00000433555 BICDL1Q6ZP65 573 aa24.6■■□□□ 1.53
RPUSD3-207ENST00000433555 TTLL7Q6ZT98 887 aa24.6■■□□□ 1.53
RPUSD3-207ENST00000433555 IL16Q14005 1332 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms