RNA–Protein interactions for RNA: ENST00000433382.5

TRAPPC12-207, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-207ENST00000433382 MSH5O43196 834 aa16.41■□□□□ 0.22
TRAPPC12-207ENST00000433382 GYS1P13807 737 aa16.41■□□□□ 0.22
TRAPPC12-207ENST00000433382 CCDC87Q9NVE4 849 aa16.41■□□□□ 0.22
TRAPPC12-207ENST00000433382 SRP68Q9UHB9 627 aaKnown RBP16.41■□□□□ 0.22
TRAPPC12-207ENST00000433382 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
TRAPPC12-207ENST00000433382 RTCBQ9Y3I0 505 aaKnown RBP16.41■□□□□ 0.22
TRAPPC12-207ENST00000433382 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
TRAPPC12-207ENST00000433382 TAF7Q15545 349 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC12-207ENST00000433382 TRAPPC3LQ5T215 181 aa16.4■□□□□ 0.22
TRAPPC12-207ENST00000433382 NLGN2Q8NFZ4 835 aa16.4■□□□□ 0.22
TRAPPC12-207ENST00000433382 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
TRAPPC12-207ENST00000433382 PPP1R1BQ9UD71 204 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC12-207ENST00000433382 DLEC1Q9Y238 1755 aa16.4■□□□□ 0.22
TRAPPC12-207ENST00000433382 ADRA2BP18089 450 aa16.39■□□□□ 0.21
TRAPPC12-207ENST00000433382 HMGB2P26583 209 aaKnown RBP16.39■□□□□ 0.21
TRAPPC12-207ENST00000433382 EIF5P55010 431 aaKnown RBP16.39■□□□□ 0.21
TRAPPC12-207ENST00000433382 RIPK4P57078 832 aa16.39■□□□□ 0.21
TRAPPC12-207ENST00000433382 RTF1Q92541 710 aaKnown RBP16.39■□□□□ 0.21
TRAPPC12-207ENST00000433382 RUNDC1Q96C34 613 aa16.39■□□□□ 0.21
TRAPPC12-207ENST00000433382 USP42Q9H9J4 1324 aaKnown RBP16.39■□□□□ 0.21
TRAPPC12-207ENST00000433382 A1BGP04217 495 aa16.38■□□□□ 0.21
TRAPPC12-207ENST00000433382 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
TRAPPC12-207ENST00000433382 FMNL2Q96PY5 1086 aa16.38■□□□□ 0.21
TRAPPC12-207ENST00000433382 COL15A1P39059 1388 aa16.38■□□□□ 0.21
TRAPPC12-207ENST00000433382 FKBP8Q14318 412 aa16.37■□□□□ 0.21
TRAPPC12-207ENST00000433382 TTC5Q8N0Z6 440 aa16.37■□□□□ 0.21
TRAPPC12-207ENST00000433382 ARFGEF1Q9Y6D6 1849 aa16.37■□□□□ 0.21
TRAPPC12-207ENST00000433382 MAPK8IP3Q9UPT6 1336 aa16.37■□□□□ 0.21
TRAPPC12-207ENST00000433382 CACNA1SQ13698 1873 aa16.36■□□□□ 0.21
TRAPPC12-207ENST00000433382 NBPF26B4DH59 902 aa16.36■□□□□ 0.21
TRAPPC12-207ENST00000433382 PIP4K2AP48426 406 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC12-207ENST00000433382 EIF4A1P60842 406 aaKnown RBP16.36■□□□□ 0.21
TRAPPC12-207ENST00000433382 NBPF10Q6P3W6 841 aaKnown RBP16.36■□□□□ 0.21
TRAPPC12-207ENST00000433382 NBPF15Q8N660 670 aa16.36■□□□□ 0.21
TRAPPC12-207ENST00000433382 PNNQ9H307 717 aaKnown RBP16.36■□□□□ 0.21
TRAPPC12-207ENST00000433382 POLD1P28340 1107 aa16.35■□□□□ 0.21
TRAPPC12-207ENST00000433382 TM4SF1P30408 202 aa16.35■□□□□ 0.21
TRAPPC12-207ENST00000433382 DDR1Q08345 913 aa16.35■□□□□ 0.21
TRAPPC12-207ENST00000433382 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
TRAPPC12-207ENST00000433382 COL11A2P13942 1736 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC12-207ENST00000433382 ANKRD36CQ5JPF3 1778 aa16.34■□□□□ 0.21
TRAPPC12-207ENST00000433382 CCER2I3L3R5 266 aa16.34■□□□□ 0.21
TRAPPC12-207ENST00000433382 MMP10P09238 476 aa16.34■□□□□ 0.21
TRAPPC12-207ENST00000433382 CANXP27824 592 aaKnown RBP16.34■□□□□ 0.21
TRAPPC12-207ENST00000433382 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
TRAPPC12-207ENST00000433382 USPL1Q5W0Q7 1092 aa16.34■□□□□ 0.21
TRAPPC12-207ENST00000433382 MIER1Q8N108 512 aa16.34■□□□□ 0.21
TRAPPC12-207ENST00000433382 NARFQ9UHQ1 456 aa16.34■□□□□ 0.21
TRAPPC12-207ENST00000433382 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.21
TRAPPC12-207ENST00000433382 APAF1O14727 1248 aa16.33■□□□□ 0.2
TRAPPC12-207ENST00000433382 GIGYF1O75420 1035 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC12-207ENST00000433382 RFC4P35249 363 aa16.33■□□□□ 0.2
TRAPPC12-207ENST00000433382 C10orf71Q711Q0 1435 aa16.33■□□□□ 0.2
TRAPPC12-207ENST00000433382 SBF1O95248 1867 aa16.33■□□□□ 0.2
TRAPPC12-207ENST00000433382 PXDNLA1KZ92 1463 aa16.31■□□□□ 0.2
TRAPPC12-207ENST00000433382 SENP3-EIF4A1A0A087X0R7 540 aa16.31■□□□□ 0.2
TRAPPC12-207ENST00000433382 CHL1O00533 1208 aa16.31■□□□□ 0.2
TRAPPC12-207ENST00000433382 NEFMP07197 916 aa16.31■□□□□ 0.2
TRAPPC12-207ENST00000433382 SNRPA1P09661 255 aaKnown RBP16.31■□□□□ 0.2
TRAPPC12-207ENST00000433382 IL6STP40189 918 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC12-207ENST00000433382 KRT24Q2M2I5 525 aa16.31■□□□□ 0.2
TRAPPC12-207ENST00000433382 LRP10Q7Z4F1 713 aa16.31■□□□□ 0.2
TRAPPC12-207ENST00000433382 NLGN1Q8N2Q7 840 aa16.31■□□□□ 0.2
TRAPPC12-207ENST00000433382 TEX13AQ9BXU3 409 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC12-207ENST00000433382 CACNA1FO60840 1977 aa16.3■□□□□ 0.2
TRAPPC12-207ENST00000433382 POLRMTO00411 1230 aaKnown RBP16.3■□□□□ 0.2
TRAPPC12-207ENST00000433382 STARD3NLO95772 234 aa16.3■□□□□ 0.2
TRAPPC12-207ENST00000433382 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
TRAPPC12-207ENST00000433382 CAMTA2O94983 1202 aa16.29■□□□□ 0.2
TRAPPC12-207ENST00000433382 YBX3P16989 372 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRAPPC12-207ENST00000433382 NFIXQ14938 502 aa16.29■□□□□ 0.2
TRAPPC12-207ENST00000433382 TBC1D2BQ9UPU7 963 aa16.29■□□□□ 0.2
TRAPPC12-207ENST00000433382 CD2APQ9Y5K6 639 aa16.29■□□□□ 0.2
TRAPPC12-207ENST00000433382 ARFGEF2Q9Y6D5 1785 aa16.28■□□□□ 0.2
TRAPPC12-207ENST00000433382 PDIA6Q15084 440 aa16.28■□□□□ 0.2
TRAPPC12-207ENST00000433382 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
TRAPPC12-207ENST00000433382 MRS2Q9HD23 443 aa16.28■□□□□ 0.2
TRAPPC12-207ENST00000433382 LAMB2P55268 1798 aa16.28■□□□□ 0.2
TRAPPC12-207ENST00000433382 CARMIL3Q8ND23 1372 aa16.27■□□□□ 0.2
TRAPPC12-207ENST00000433382 KCNA3P22001 575 aa16.27■□□□□ 0.2
TRAPPC12-207ENST00000433382 BABAM1Q9NWV8 329 aa16.27■□□□□ 0.2
TRAPPC12-207ENST00000433382 TSPYL4Q9UJ04 414 aa16.27■□□□□ 0.2
TRAPPC12-207ENST00000433382 TBC1D9BQ66K14 1250 aa16.26■□□□□ 0.19
TRAPPC12-207ENST00000433382 TNRC6CQ9HCJ0 1690 aaKnown RBP16.26■□□□□ 0.19
TRAPPC12-207ENST00000433382 SLX4Q8IY92 1834 aa16.25■□□□□ 0.19
TRAPPC12-207ENST00000433382 LMOD3Q0VAK6 560 aa16.25■□□□□ 0.19
TRAPPC12-207ENST00000433382 PROSER3Q2NL68 480 aa16.25■□□□□ 0.19
TRAPPC12-207ENST00000433382 ZPR1O75312 459 aa16.24■□□□□ 0.19
TRAPPC12-207ENST00000433382 MBIPQ9NS73 344 aa16.24■□□□□ 0.19
TRAPPC12-207ENST00000433382 TAF1P21675 1872 aa16.24■□□□□ 0.19
TRAPPC12-207ENST00000433382 HLFQ16534 295 aa16.23■□□□□ 0.19
TRAPPC12-207ENST00000433382 TTLL7Q6ZT98 887 aa16.23■□□□□ 0.19
TRAPPC12-207ENST00000433382 DZIP3Q86Y13 1208 aaKnown RBP16.23■□□□□ 0.19
TRAPPC12-207ENST00000433382 CFAP44Q96MT7 982 aa16.23■□□□□ 0.19
TRAPPC12-207ENST00000433382 FER1L6Q2WGJ9 1857 aa16.22■□□□□ 0.19
TRAPPC12-207ENST00000433382 A0A087WZG4 1122 aa16.22■□□□□ 0.19
TRAPPC12-207ENST00000433382 ANXA1P04083 346 aa16.22■□□□□ 0.19
TRAPPC12-207ENST00000433382 ZNF330Q9Y3S2 320 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC12-207ENST00000433382 PARP3Q9Y6F1 533 aa16.22■□□□□ 0.19
TRAPPC12-207ENST00000433382 DICER1Q9UPY3 1922 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms