RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 GIGYF1O75420 1035 aaPredicted RBP18.74■□□□□ 0.59
CSTF3-202ENST00000431742 CRKLP46109 303 aaKnown RBP18.73■□□□□ 0.59
CSTF3-202ENST00000431742 INTS5Q6P9B9 1019 aaKnown RBP18.73■□□□□ 0.59
CSTF3-202ENST00000431742 R3HDM1Q15032 1099 aaKnown RBP18.72■□□□□ 0.59
CSTF3-202ENST00000431742 AMIGO3Q86WK7 504 aa18.72■□□□□ 0.59
CSTF3-202ENST00000431742 AK7Q96M32 723 aa18.72■□□□□ 0.59
CSTF3-202ENST00000431742 SPINK5Q9NQ38 1064 aaPredicted RBP18.72■□□□□ 0.59
CSTF3-202ENST00000431742 BCORQ6W2J9 1755 aa18.72■□□□□ 0.59
CSTF3-202ENST00000431742 SCN7AQ01118 1682 aa18.72■□□□□ 0.59
CSTF3-202ENST00000431742 PNPLA7Q6ZV29 1317 aa18.72■□□□□ 0.59
CSTF3-202ENST00000431742 FANCIQ9NVI1 1328 aa18.72■□□□□ 0.59
CSTF3-202ENST00000431742 STARD3NLO95772 234 aa18.71■□□□□ 0.59
CSTF3-202ENST00000431742 KRT24Q2M2I5 525 aa18.71■□□□□ 0.59
CSTF3-202ENST00000431742 TSR2Q969E8 191 aaKnown RBP18.71■□□□□ 0.59
CSTF3-202ENST00000431742 CCDC87Q9NVE4 849 aa18.71■□□□□ 0.59
CSTF3-202ENST00000431742 USP16Q9Y5T5 823 aa18.71■□□□□ 0.59
CSTF3-202ENST00000431742 CACNA1FO60840 1977 aa18.7■□□□□ 0.58
CSTF3-202ENST00000431742 GNPATO15228 680 aa18.7■□□□□ 0.58
CSTF3-202ENST00000431742 HNRNPUQ00839 825 aaKnown RBP eCLIP18.7■□□□□ 0.58
CSTF3-202ENST00000431742 PSDA5PKW4 1024 aaPredicted RBP18.69■□□□□ 0.58
CSTF3-202ENST00000431742 RPS6KA4O75676 772 aa18.69■□□□□ 0.58
CSTF3-202ENST00000431742 HOXB7P09629 217 aa18.69■□□□□ 0.58
CSTF3-202ENST00000431742 SSFA2P28290 1259 aa18.69■□□□□ 0.58
CSTF3-202ENST00000431742 TFCP2L1Q9NZI6 479 aa18.69■□□□□ 0.58
CSTF3-202ENST00000431742 ZBTB1Q9Y2K1 713 aa18.69■□□□□ 0.58
CSTF3-202ENST00000431742 SOS1Q07889 1333 aaPredicted RBP18.69■□□□□ 0.58
CSTF3-202ENST00000431742 GOLGA2Q08379 1002 aa18.68■□□□□ 0.58
CSTF3-202ENST00000431742 MYH16Q9H6N6 1097 aa18.68■□□□□ 0.58
CSTF3-202ENST00000431742 MAPK8IP2Q13387 824 aaPredicted RBP18.67■□□□□ 0.58
CSTF3-202ENST00000431742 PDGFDQ9GZP0 370 aaPredicted RBP18.67■□□□□ 0.58
CSTF3-202ENST00000431742 RTCBQ9Y3I0 505 aaKnown RBP18.67■□□□□ 0.58
CSTF3-202ENST00000431742 ZBED9Q6R2W3 1325 aa18.67■□□□□ 0.58
CSTF3-202ENST00000431742 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.66■□□□□ 0.58
CSTF3-202ENST00000431742 E9PSI1 815 aa18.66■□□□□ 0.58
CSTF3-202ENST00000431742 A1BGP04217 495 aa18.66■□□□□ 0.58
CSTF3-202ENST00000431742 SLFN5Q08AF3 891 aa18.66■□□□□ 0.58
CSTF3-202ENST00000431742 DUSP27Q5VZP5 1158 aa18.66■□□□□ 0.58
CSTF3-202ENST00000431742 COL23A1Q86Y22 540 aaPredicted RBP18.66■□□□□ 0.58
CSTF3-202ENST00000431742 C8orf58Q8NAV2 365 aa18.66■□□□□ 0.58
CSTF3-202ENST00000431742 FLAD1Q8NFF5 587 aa18.66■□□□□ 0.58
CSTF3-202ENST00000431742 ERBB4Q15303 1308 aa18.66■□□□□ 0.58
CSTF3-202ENST00000431742 COL15A1P39059 1388 aa18.66■□□□□ 0.58
CSTF3-202ENST00000431742 LRP5O75197 1615 aa18.65■□□□□ 0.58
CSTF3-202ENST00000431742 NBPF26B4DH59 902 aa18.65■□□□□ 0.58
CSTF3-202ENST00000431742 NBPF10Q6P3W6 841 aaKnown RBP18.65■□□□□ 0.58
CSTF3-202ENST00000431742 SMIM5Q71RC9 77 aa18.65■□□□□ 0.58
CSTF3-202ENST00000431742 TRMT2AQ8IZ69 625 aaKnown RBP18.65■□□□□ 0.58
CSTF3-202ENST00000431742 NBPF15Q8N660 670 aa18.65■□□□□ 0.58
CSTF3-202ENST00000431742 PHF14O94880 888 aa18.64■□□□□ 0.57
CSTF3-202ENST00000431742 IL6STP40189 918 aaPredicted RBP18.64■□□□□ 0.57
CSTF3-202ENST00000431742 EIF5P55010 431 aaKnown RBP18.64■□□□□ 0.57
CSTF3-202ENST00000431742 CDCA7LQ96GN5 454 aa18.64■□□□□ 0.57
CSTF3-202ENST00000431742 CANXP27824 592 aaKnown RBP18.63■□□□□ 0.57
CSTF3-202ENST00000431742 TSPYL6Q8N831 410 aa18.63■□□□□ 0.57
CSTF3-202ENST00000431742 NUP98P52948 1817 aa18.63■□□□□ 0.57
CSTF3-202ENST00000431742 PIP4K2AP48426 406 aaPredicted RBP18.62■□□□□ 0.57
CSTF3-202ENST00000431742 EXOSC9Q06265 439 aaKnown RBP18.62■□□□□ 0.57
CSTF3-202ENST00000431742 PDIA6Q15084 440 aa18.62■□□□□ 0.57
CSTF3-202ENST00000431742 TRAPPC3LQ5T215 181 aa18.62■□□□□ 0.57
CSTF3-202ENST00000431742 LRP10Q7Z4F1 713 aa18.62■□□□□ 0.57
CSTF3-202ENST00000431742 ARHGEF1Q92888 912 aaKnown RBP18.62■□□□□ 0.57
CSTF3-202ENST00000431742 ANKRD36CQ5JPF3 1778 aa18.62■□□□□ 0.57
CSTF3-202ENST00000431742 EIF2S2P20042 333 aaKnown RBP18.61■□□□□ 0.57
CSTF3-202ENST00000431742 TWISTNBQ3B726 338 aaPredicted RBP18.61■□□□□ 0.57
CSTF3-202ENST00000431742 HDGFL1Q5TGJ6 251 aa18.61■□□□□ 0.57
CSTF3-202ENST00000431742 SLC16A10Q8TF71 515 aa18.61■□□□□ 0.57
CSTF3-202ENST00000431742 USP42Q9H9J4 1324 aaKnown RBP18.6■□□□□ 0.57
CSTF3-202ENST00000431742 ELL2O00472 640 aaPredicted RBP18.6■□□□□ 0.57
CSTF3-202ENST00000431742 ARFGEF2Q9Y6D5 1785 aa18.6■□□□□ 0.57
CSTF3-202ENST00000431742 PROSER3Q2NL68 480 aa18.59■□□□□ 0.57
CSTF3-202ENST00000431742 A0A087WZG4 1122 aa18.58■□□□□ 0.56
CSTF3-202ENST00000431742 VAMP4O75379 141 aa18.58■□□□□ 0.56
CSTF3-202ENST00000431742 NECTIN2Q92692 538 aa18.58■□□□□ 0.56
CSTF3-202ENST00000431742 MTFR1LQ9H019 292 aa18.58■□□□□ 0.56
CSTF3-202ENST00000431742 DDX21Q9NR30 783 aaKnown RBP eCLIP18.58■□□□□ 0.56
CSTF3-202ENST00000431742 CHPF2Q9P2E5 772 aa18.58■□□□□ 0.56
CSTF3-202ENST00000431742 NARFQ9UHQ1 456 aa18.58■□□□□ 0.56
CSTF3-202ENST00000431742 RFC4P35249 363 aa18.57■□□□□ 0.56
CSTF3-202ENST00000431742 DBF4Q9UBU7 674 aaPredicted RBP18.57■□□□□ 0.56
CSTF3-202ENST00000431742 AFDNP55196 1824 aaKnown RBP18.57■□□□□ 0.56
CSTF3-202ENST00000431742 ZBTB7AO95365 584 aa18.56■□□□□ 0.56
CSTF3-202ENST00000431742 MYL6BP14649 208 aa18.56■□□□□ 0.56
CSTF3-202ENST00000431742 CHMP4AQ9BY43 222 aa18.56■□□□□ 0.56
CSTF3-202ENST00000431742 SRP68Q9UHB9 627 aaKnown RBP18.56■□□□□ 0.56
CSTF3-202ENST00000431742 NRXN2Q9P2S2 1712 aa18.56■□□□□ 0.56
CSTF3-202ENST00000431742 CAMTA2O94983 1202 aa18.55■□□□□ 0.56
CSTF3-202ENST00000431742 ANXA1P04083 346 aa18.55■□□□□ 0.56
CSTF3-202ENST00000431742 GYS1P13807 737 aa18.55■□□□□ 0.56
CSTF3-202ENST00000431742 CCDC30Q5VVM6 783 aa18.55■□□□□ 0.56
CSTF3-202ENST00000431742 PPP4R3CPQ6ZMV5 832 aa18.55■□□□□ 0.56
CSTF3-202ENST00000431742 BCL2L12Q9HB09 334 aa18.55■□□□□ 0.56
CSTF3-202ENST00000431742 ZNF330Q9Y3S2 320 aaPredicted RBP18.55■□□□□ 0.56
CSTF3-202ENST00000431742 RGL2O15211 777 aa18.54■□□□□ 0.56
CSTF3-202ENST00000431742 DZIP3Q86Y13 1208 aaKnown RBP18.54■□□□□ 0.56
CSTF3-202ENST00000431742 SGIP1Q9BQI5 828 aa18.54■□□□□ 0.56
CSTF3-202ENST00000431742 TBC1D2BQ9UPU7 963 aa18.54■□□□□ 0.56
CSTF3-202ENST00000431742 KIF13BQ9NQT8 1826 aa18.53■□□□□ 0.56
CSTF3-202ENST00000431742 ZPR1O75312 459 aa18.53■□□□□ 0.56
CSTF3-202ENST00000431742 PTGER2P43116 358 aa18.53■□□□□ 0.56
CSTF3-202ENST00000431742 USPL1Q5W0Q7 1092 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms