RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 TAF1LQ8IZX4 1826 aa23.94■■□□□ 1.42
RFTN1-202ENST00000431547 PNPLA7Q6ZV29 1317 aa23.93■■□□□ 1.42
RFTN1-202ENST00000431547 SSFA2P28290 1259 aa23.93■■□□□ 1.42
RFTN1-202ENST00000431547 GOLGA2Q08379 1002 aa23.92■■□□□ 1.42
RFTN1-202ENST00000431547 AMIGO3Q86WK7 504 aa23.92■■□□□ 1.42
RFTN1-202ENST00000431547 TSR2Q969E8 191 aaKnown RBP23.92■■□□□ 1.42
RFTN1-202ENST00000431547 SPINK5Q9NQ38 1064 aaPredicted RBP23.92■■□□□ 1.42
RFTN1-202ENST00000431547 COL5A3P25940 1745 aaPredicted RBP23.92■■□□□ 1.42
RFTN1-202ENST00000431547 A1BGP04217 495 aa23.91■■□□□ 1.42
RFTN1-202ENST00000431547 HOXB7P09629 217 aa23.91■■□□□ 1.42
RFTN1-202ENST00000431547 HNRNPUQ00839 825 aaKnown RBP eCLIP23.91■■□□□ 1.42
RFTN1-202ENST00000431547 KRT24Q2M2I5 525 aa23.91■■□□□ 1.42
RFTN1-202ENST00000431547 MYH16Q9H6N6 1097 aa23.91■■□□□ 1.42
RFTN1-202ENST00000431547 ZBTB1Q9Y2K1 713 aa23.91■■□□□ 1.42
RFTN1-202ENST00000431547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.9■■□□□ 1.42
RFTN1-202ENST00000431547 ADRA2BP18089 450 aa23.9■■□□□ 1.42
RFTN1-202ENST00000431547 COL23A1Q86Y22 540 aaPredicted RBP23.9■■□□□ 1.42
RFTN1-202ENST00000431547 FANCIQ9NVI1 1328 aa23.89■■□□□ 1.42
RFTN1-202ENST00000431547 TRAPPC3LQ5T215 181 aa23.89■■□□□ 1.41
RFTN1-202ENST00000431547 DUSP27Q5VZP5 1158 aa23.89■■□□□ 1.41
RFTN1-202ENST00000431547 PDGFDQ9GZP0 370 aaPredicted RBP23.89■■□□□ 1.41
RFTN1-202ENST00000431547 SOS1Q07889 1333 aaPredicted RBP23.88■■□□□ 1.41
RFTN1-202ENST00000431547 E9PSI1 815 aa23.88■■□□□ 1.41
RFTN1-202ENST00000431547 PHF14O94880 888 aa23.88■■□□□ 1.41
RFTN1-202ENST00000431547 CANXP27824 592 aaKnown RBP23.88■■□□□ 1.41
RFTN1-202ENST00000431547 SMIM5Q71RC9 77 aa23.88■■□□□ 1.41
RFTN1-202ENST00000431547 C8orf58Q8NAV2 365 aa23.88■■□□□ 1.41
RFTN1-202ENST00000431547 IL6STP40189 918 aaPredicted RBP23.87■■□□□ 1.41
RFTN1-202ENST00000431547 SLC16A10Q8TF71 515 aa23.87■■□□□ 1.41
RFTN1-202ENST00000431547 EIF5P55010 431 aaKnown RBP23.86■■□□□ 1.41
RFTN1-202ENST00000431547 SLFN5Q08AF3 891 aa23.86■■□□□ 1.41
RFTN1-202ENST00000431547 ARHGEF1Q92888 912 aaKnown RBP23.86■■□□□ 1.41
RFTN1-202ENST00000431547 ERBB4Q15303 1308 aa23.85■■□□□ 1.41
RFTN1-202ENST00000431547 NBPF26B4DH59 902 aa23.85■■□□□ 1.41
RFTN1-202ENST00000431547 MSH5O43196 834 aa23.85■■□□□ 1.41
RFTN1-202ENST00000431547 EIF2S2P20042 333 aaKnown RBP23.85■■□□□ 1.41
RFTN1-202ENST00000431547 NBPF10Q6P3W6 841 aaKnown RBP23.85■■□□□ 1.41
RFTN1-202ENST00000431547 NBPF15Q8N660 670 aa23.85■■□□□ 1.41
RFTN1-202ENST00000431547 ELL2O00472 640 aaPredicted RBP23.84■■□□□ 1.41
RFTN1-202ENST00000431547 CHMP4AQ9BY43 222 aa23.84■■□□□ 1.41
RFTN1-202ENST00000431547 RFC4P35249 363 aa23.83■■□□□ 1.41
RFTN1-202ENST00000431547 TRMT2AQ8IZ69 625 aaKnown RBP23.83■■□□□ 1.41
RFTN1-202ENST00000431547 TSPYL6Q8N831 410 aa23.83■■□□□ 1.41
RFTN1-202ENST00000431547 CDCA7LQ96GN5 454 aa23.83■■□□□ 1.41
RFTN1-202ENST00000431547 QSER1Q2KHR3 1735 aa23.83■■□□□ 1.41
RFTN1-202ENST00000431547 MYH14Q7Z406 1995 aaKnown RBP23.82■■□□□ 1.4
RFTN1-202ENST00000431547 A0A087WZG4 1122 aa23.82■■□□□ 1.4
RFTN1-202ENST00000431547 PIP4K2AP48426 406 aaPredicted RBP23.82■■□□□ 1.4
RFTN1-202ENST00000431547 EXOSC9Q06265 439 aaKnown RBP23.82■■□□□ 1.4
RFTN1-202ENST00000431547 HDGFL1Q5TGJ6 251 aa23.82■■□□□ 1.4
RFTN1-202ENST00000431547 UBR3Q6ZT12 1888 aa23.81■■□□□ 1.4
RFTN1-202ENST00000431547 COL15A1P39059 1388 aa23.81■■□□□ 1.4
RFTN1-202ENST00000431547 PDIA6Q15084 440 aa23.81■■□□□ 1.4
RFTN1-202ENST00000431547 TWISTNBQ3B726 338 aaPredicted RBP23.81■■□□□ 1.4
RFTN1-202ENST00000431547 NPM2Q86SE8 214 aaKnown RBP23.81■■□□□ 1.4
RFTN1-202ENST00000431547 MTFR1LQ9H019 292 aa23.81■■□□□ 1.4
RFTN1-202ENST00000431547 NECTIN2Q92692 538 aa23.8■■□□□ 1.4
RFTN1-202ENST00000431547 ZBED9Q6R2W3 1325 aa23.8■■□□□ 1.4
RFTN1-202ENST00000431547 CASZ1Q86V15 1759 aa23.79■■□□□ 1.4
RFTN1-202ENST00000431547 ZBTB7AO95365 584 aa23.79■■□□□ 1.4
RFTN1-202ENST00000431547 NARFQ9UHQ1 456 aa23.79■■□□□ 1.4
RFTN1-202ENST00000431547 ZNF330Q9Y3S2 320 aaPredicted RBP23.79■■□□□ 1.4
RFTN1-202ENST00000431547 LAMB4A4D0S4 1761 aa23.78■■□□□ 1.4
RFTN1-202ENST00000431547 TUBGCP6Q96RT7 1819 aa23.78■■□□□ 1.4
RFTN1-202ENST00000431547 DDX21Q9NR30 783 aaKnown RBP eCLIP23.78■■□□□ 1.4
RFTN1-202ENST00000431547 DBF4Q9UBU7 674 aaPredicted RBP23.78■■□□□ 1.4
RFTN1-202ENST00000431547 USP42Q9H9J4 1324 aaKnown RBP23.78■■□□□ 1.4
RFTN1-202ENST00000431547 ZPR1O75312 459 aa23.77■■□□□ 1.4
RFTN1-202ENST00000431547 VAMP4O75379 141 aa23.77■■□□□ 1.4
RFTN1-202ENST00000431547 MYL6BP14649 208 aa23.77■■□□□ 1.4
RFTN1-202ENST00000431547 CCDC30Q5VVM6 783 aa23.77■■□□□ 1.4
RFTN1-202ENST00000431547 LRP10Q7Z4F1 713 aa23.77■■□□□ 1.4
RFTN1-202ENST00000431547 SPON1Q9HCB6 807 aa23.76■■□□□ 1.39
RFTN1-202ENST00000431547 CHPF2Q9P2E5 772 aa23.76■■□□□ 1.39
RFTN1-202ENST00000431547 SRP68Q9UHB9 627 aaKnown RBP23.76■■□□□ 1.39
RFTN1-202ENST00000431547 ATF5Q9Y2D1 282 aaPredicted RBP23.76■■□□□ 1.39
RFTN1-202ENST00000431547 GYS1P13807 737 aa23.75■■□□□ 1.39
RFTN1-202ENST00000431547 PROSER3Q2NL68 480 aa23.75■■□□□ 1.39
RFTN1-202ENST00000431547 DZIP3Q86Y13 1208 aaKnown RBP23.75■■□□□ 1.39
RFTN1-202ENST00000431547 NLGN1Q8N2Q7 840 aa23.75■■□□□ 1.39
RFTN1-202ENST00000431547 TBC1D2BQ9UPU7 963 aa23.75■■□□□ 1.39
RFTN1-202ENST00000431547 USPL1Q5W0Q7 1092 aa23.74■■□□□ 1.39
RFTN1-202ENST00000431547 ARXQ96QS3 562 aa23.74■■□□□ 1.39
RFTN1-202ENST00000431547 HYPKQ9NX55 129 aa23.74■■□□□ 1.39
RFTN1-202ENST00000431547 ANXA1P04083 346 aa23.73■■□□□ 1.39
RFTN1-202ENST00000431547 RGL2O15211 777 aa23.72■■□□□ 1.39
RFTN1-202ENST00000431547 CAMTA2O94983 1202 aa23.72■■□□□ 1.39
RFTN1-202ENST00000431547 MSL1Q68DK7 614 aa23.72■■□□□ 1.39
RFTN1-202ENST00000431547 SGIP1Q9BQI5 828 aa23.72■■□□□ 1.39
RFTN1-202ENST00000431547 BCL2L12Q9HB09 334 aa23.72■■□□□ 1.39
RFTN1-202ENST00000431547 PTGER2P43116 358 aa23.71■■□□□ 1.39
RFTN1-202ENST00000431547 FKBP8Q14318 412 aa23.7■■□□□ 1.38
RFTN1-202ENST00000431547 TTLL7Q6ZT98 887 aa23.7■■□□□ 1.38
RFTN1-202ENST00000431547 COPS6Q7L5N1 327 aa23.7■■□□□ 1.38
RFTN1-202ENST00000431547 STK31Q9BXU1 1019 aa23.7■■□□□ 1.38
RFTN1-202ENST00000431547 ERVV-1B6SEH8 477 aa23.69■■□□□ 1.38
RFTN1-202ENST00000431547 CLEC4GQ6UXB4 293 aa23.69■■□□□ 1.38
RFTN1-202ENST00000431547 KIF6Q6ZMV9 814 aa23.69■■□□□ 1.38
RFTN1-202ENST00000431547 XAGE3Q8WTP9 111 aa23.69■■□□□ 1.38
RFTN1-202ENST00000431547 C4AP0C0L4 1744 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms