RNA–Protein interactions for RNA: ENST00000428895.1

BX088651.4-202, humanhuman

TSL 1 (best) BASIC

Gene BX088651.4, Length 1,479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BX088651.4-202ENST00000428895 LAMB4A4D0S4 1761 aa16.8■□□□□ 0.28
BX088651.4-202ENST00000428895 ZNF853P0CG23 659 aa16.8■□□□□ 0.28
BX088651.4-202ENST00000428895 AMIGO3Q86WK7 504 aa16.8■□□□□ 0.28
BX088651.4-202ENST00000428895 MBIPQ9NS73 344 aa16.8■□□□□ 0.28
BX088651.4-202ENST00000428895 PRAMEF22A3QJZ6 481 aa16.79■□□□□ 0.28
BX088651.4-202ENST00000428895 WDR63Q8IWG1 891 aa16.79■□□□□ 0.28
BX088651.4-202ENST00000428895 FLAD1Q8NFF5 587 aa16.79■□□□□ 0.28
BX088651.4-202ENST00000428895 AK7Q96M32 723 aa16.79■□□□□ 0.28
BX088651.4-202ENST00000428895 ARXQ96QS3 562 aa16.79■□□□□ 0.28
BX088651.4-202ENST00000428895 SNRPA1P09661 255 aaKnown RBP16.78■□□□□ 0.28
BX088651.4-202ENST00000428895 CYP19A1P11511 503 aaPredicted RBP16.78■□□□□ 0.28
BX088651.4-202ENST00000428895 CRKLP46109 303 aaKnown RBP16.78■□□□□ 0.28
BX088651.4-202ENST00000428895 IL16Q14005 1332 aa16.78■□□□□ 0.28
BX088651.4-202ENST00000428895 GNPATO15228 680 aa16.77■□□□□ 0.28
BX088651.4-202ENST00000428895 STARD3NLO95772 234 aa16.77■□□□□ 0.28
BX088651.4-202ENST00000428895 POLD1P28340 1107 aa16.77■□□□□ 0.28
BX088651.4-202ENST00000428895 HNRNPUQ00839 825 aaKnown RBP eCLIP16.77■□□□□ 0.28
BX088651.4-202ENST00000428895 TSR2Q969E8 191 aaKnown RBP16.77■□□□□ 0.28
BX088651.4-202ENST00000428895 TEX13AQ9BXU3 409 aaPredicted RBP16.77■□□□□ 0.28
BX088651.4-202ENST00000428895 FHDC1Q9C0D6 1143 aaPredicted RBP16.77■□□□□ 0.28
BX088651.4-202ENST00000428895 USP16Q9Y5T5 823 aa16.77■□□□□ 0.28
BX088651.4-202ENST00000428895 GIGYF1O75420 1035 aaPredicted RBP16.76■□□□□ 0.27
BX088651.4-202ENST00000428895 SSFA2P28290 1259 aa16.76■□□□□ 0.27
BX088651.4-202ENST00000428895 KRT24Q2M2I5 525 aa16.76■□□□□ 0.27
BX088651.4-202ENST00000428895 SMIM5Q71RC9 77 aa16.76■□□□□ 0.27
BX088651.4-202ENST00000428895 SYT17Q9BSW7 474 aa16.76■□□□□ 0.27
BX088651.4-202ENST00000428895 ZNF521Q96K83 1311 aa16.76■□□□□ 0.27
BX088651.4-202ENST00000428895 CNTNAP4Q9C0A0 1308 aa16.76■□□□□ 0.27
BX088651.4-202ENST00000428895 RC3H1Q5TC82 1133 aaKnown RBP16.75■□□□□ 0.27
BX088651.4-202ENST00000428895 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
BX088651.4-202ENST00000428895 CHD4Q14839 1912 aa16.75■□□□□ 0.27
BX088651.4-202ENST00000428895 PHF14O94880 888 aa16.74■□□□□ 0.27
BX088651.4-202ENST00000428895 INTS5Q6P9B9 1019 aaKnown RBP16.74■□□□□ 0.27
BX088651.4-202ENST00000428895 CCDC87Q9NVE4 849 aa16.74■□□□□ 0.27
BX088651.4-202ENST00000428895 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.73■□□□□ 0.27
BX088651.4-202ENST00000428895 A1BGP04217 495 aa16.73■□□□□ 0.27
BX088651.4-202ENST00000428895 ZBTB1Q9Y2K1 713 aa16.73■□□□□ 0.27
BX088651.4-202ENST00000428895 RTCBQ9Y3I0 505 aaKnown RBP16.73■□□□□ 0.27
BX088651.4-202ENST00000428895 C4AP0C0L4 1744 aa16.73■□□□□ 0.27
BX088651.4-202ENST00000428895 MSH5O43196 834 aa16.73■□□□□ 0.27
BX088651.4-202ENST00000428895 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
BX088651.4-202ENST00000428895 GOLGA2Q08379 1002 aa16.73■□□□□ 0.27
BX088651.4-202ENST00000428895 FANCIQ9NVI1 1328 aa16.72■□□□□ 0.27
BX088651.4-202ENST00000428895 ELL2O00472 640 aaPredicted RBP16.72■□□□□ 0.27
BX088651.4-202ENST00000428895 RPS6KA4O75676 772 aa16.72■□□□□ 0.27
BX088651.4-202ENST00000428895 EIF2S2P20042 333 aaKnown RBP16.72■□□□□ 0.27
BX088651.4-202ENST00000428895 PIP4K2AP48426 406 aaPredicted RBP16.72■□□□□ 0.27
BX088651.4-202ENST00000428895 DUSP27Q5VZP5 1158 aa16.71■□□□□ 0.27
BX088651.4-202ENST00000428895 NECTIN2Q92692 538 aa16.71■□□□□ 0.27
BX088651.4-202ENST00000428895 MYH16Q9H6N6 1097 aa16.71■□□□□ 0.27
BX088651.4-202ENST00000428895 ZNF330Q9Y3S2 320 aaPredicted RBP16.71■□□□□ 0.27
BX088651.4-202ENST00000428895 TRAPPC3LQ5T215 181 aa16.7■□□□□ 0.26
BX088651.4-202ENST00000428895 MSL1Q68DK7 614 aa16.7■□□□□ 0.26
BX088651.4-202ENST00000428895 C8orf58Q8NAV2 365 aa16.7■□□□□ 0.26
BX088651.4-202ENST00000428895 CDCA7LQ96GN5 454 aa16.7■□□□□ 0.26
BX088651.4-202ENST00000428895 SOS1Q07889 1333 aaPredicted RBP16.69■□□□□ 0.26
BX088651.4-202ENST00000428895 E9PSI1 815 aa16.68■□□□□ 0.26
BX088651.4-202ENST00000428895 ADRA2BP18089 450 aa16.68■□□□□ 0.26
BX088651.4-202ENST00000428895 TSPYL6Q8N831 410 aa16.68■□□□□ 0.26
BX088651.4-202ENST00000428895 ARHGEF1Q92888 912 aaKnown RBP16.68■□□□□ 0.26
BX088651.4-202ENST00000428895 HOXB7P09629 217 aa16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 EXOSC9Q06265 439 aaKnown RBP16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 SLFN5Q08AF3 891 aa16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 COL15A1P39059 1388 aa16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 NBPF26B4DH59 902 aa16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 MYL6BP14649 208 aa16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 RFC4P35249 363 aa16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 IL6STP40189 918 aaPredicted RBP16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 EIF5P55010 431 aaKnown RBP16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 TWISTNBQ3B726 338 aaPredicted RBP16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 HDGFL1Q5TGJ6 251 aa16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 NBPF10Q6P3W6 841 aaKnown RBP16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 NPM2Q86SE8 214 aaKnown RBP16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 NBPF15Q8N660 670 aa16.67■□□□□ 0.26
BX088651.4-202ENST00000428895 ZBED9Q6R2W3 1325 aa16.65■□□□□ 0.26
BX088651.4-202ENST00000428895 CACNA1FO60840 1977 aa16.65■□□□□ 0.26
BX088651.4-202ENST00000428895 ANXA1P04083 346 aa16.64■□□□□ 0.25
BX088651.4-202ENST00000428895 KLHL34Q8N239 644 aa16.64■□□□□ 0.25
BX088651.4-202ENST00000428895 NLGN2Q8NFZ4 835 aa16.64■□□□□ 0.25
BX088651.4-202ENST00000428895 CHPF2Q9P2E5 772 aa16.64■□□□□ 0.25
BX088651.4-202ENST00000428895 SRP68Q9UHB9 627 aaKnown RBP16.64■□□□□ 0.25
BX088651.4-202ENST00000428895 ERBB4Q15303 1308 aa16.64■□□□□ 0.25
BX088651.4-202ENST00000428895 BCORQ6W2J9 1755 aa16.63■□□□□ 0.25
BX088651.4-202ENST00000428895 ZPR1O75312 459 aa16.63■□□□□ 0.25
BX088651.4-202ENST00000428895 PDIA6Q15084 440 aa16.63■□□□□ 0.25
BX088651.4-202ENST00000428895 PROSER3Q2NL68 480 aa16.63■□□□□ 0.25
BX088651.4-202ENST00000428895 TBC1D2BQ9UPU7 963 aa16.63■□□□□ 0.25
BX088651.4-202ENST00000428895 CD2APQ9Y5K6 639 aa16.63■□□□□ 0.25
BX088651.4-202ENST00000428895 KIF13BQ9NQT8 1826 aa16.63■□□□□ 0.25
BX088651.4-202ENST00000428895 A0A087WZG4 1122 aa16.62■□□□□ 0.25
BX088651.4-202ENST00000428895 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
BX088651.4-202ENST00000428895 TRMT2AQ8IZ69 625 aaKnown RBP16.62■□□□□ 0.25
BX088651.4-202ENST00000428895 YTHDC1Q96MU7 727 aaKnown RBP16.62■□□□□ 0.25
BX088651.4-202ENST00000428895 SCN7AQ01118 1682 aa16.62■□□□□ 0.25
BX088651.4-202ENST00000428895 NUP98P52948 1817 aa16.62■□□□□ 0.25
BX088651.4-202ENST00000428895 USP42Q9H9J4 1324 aaKnown RBP16.62■□□□□ 0.25
BX088651.4-202ENST00000428895 TCERG1O14776 1098 aaKnown RBP16.61■□□□□ 0.25
BX088651.4-202ENST00000428895 GYS1P13807 737 aa16.61■□□□□ 0.25
BX088651.4-202ENST00000428895 CCDC30Q5VVM6 783 aa16.61■□□□□ 0.25
BX088651.4-202ENST00000428895 USPL1Q5W0Q7 1092 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms