RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 RPS6KA4O75676 772 aa30.58■■■□□ 2.49
GLI3-202ENST00000428534 CYP19A1P11511 503 aaPredicted RBP30.58■■■□□ 2.49
GLI3-202ENST00000428534 CHL1O00533 1208 aa30.57■■■□□ 2.48
GLI3-202ENST00000428534 GNAI1P63096 354 aa30.57■■■□□ 2.48
GLI3-202ENST00000428534 SYT17Q9BSW7 474 aa30.57■■■□□ 2.48
GLI3-202ENST00000428534 CCDC87Q9NVE4 849 aa30.57■■■□□ 2.48
GLI3-202ENST00000428534 COL5A3P25940 1745 aaPredicted RBP30.56■■■□□ 2.48
GLI3-202ENST00000428534 EIF4A1P60842 406 aaKnown RBP30.56■■■□□ 2.48
GLI3-202ENST00000428534 TRAPPC3LQ5T215 181 aa30.56■■■□□ 2.48
GLI3-202ENST00000428534 IFT57Q9NWB7 429 aa30.56■■■□□ 2.48
GLI3-202ENST00000428534 LAS1LQ9Y4W2 734 aaKnown RBP30.56■■■□□ 2.48
GLI3-202ENST00000428534 WWC1Q8IX03 1113 aa30.55■■■□□ 2.48
GLI3-202ENST00000428534 TJP1Q07157 1748 aa30.55■■■□□ 2.48
GLI3-202ENST00000428534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.54■■■□□ 2.48
GLI3-202ENST00000428534 MSH5O43196 834 aa30.54■■■□□ 2.48
GLI3-202ENST00000428534 KDM3BQ7LBC6 1761 aa30.54■■■□□ 2.48
GLI3-202ENST00000428534 INTS5Q6P9B9 1019 aaKnown RBP30.52■■■□□ 2.48
GLI3-202ENST00000428534 NPM2Q86SE8 214 aaKnown RBP30.52■■■□□ 2.48
GLI3-202ENST00000428534 COL23A1Q86Y22 540 aaPredicted RBP30.52■■■□□ 2.48
GLI3-202ENST00000428534 WDR63Q8IWG1 891 aa30.52■■■□□ 2.48
GLI3-202ENST00000428534 COL24A1Q17RW2 1714 aa30.52■■■□□ 2.48
GLI3-202ENST00000428534 IL16Q14005 1332 aa30.51■■■□□ 2.48
GLI3-202ENST00000428534 PHF14O94880 888 aa30.51■■■□□ 2.47
GLI3-202ENST00000428534 ARXQ96QS3 562 aa30.51■■■□□ 2.47
GLI3-202ENST00000428534 CHD4Q14839 1912 aa30.5■■■□□ 2.47
GLI3-202ENST00000428534 GIGYF1O75420 1035 aaPredicted RBP30.5■■■□□ 2.47
GLI3-202ENST00000428534 ZNF853P0CG23 659 aa30.5■■■□□ 2.47
GLI3-202ENST00000428534 GOLGB1Q14789 3259 aaKnown RBP30.49■■■□□ 2.47
GLI3-202ENST00000428534 RFC4P35249 363 aa30.48■■■□□ 2.47
GLI3-202ENST00000428534 USP16Q9Y5T5 823 aa30.48■■■□□ 2.47
GLI3-202ENST00000428534 UBR3Q6ZT12 1888 aa30.48■■■□□ 2.47
GLI3-202ENST00000428534 A0A087WZG4 1122 aa30.47■■■□□ 2.47
GLI3-202ENST00000428534 CHMP4AQ9BY43 222 aa30.47■■■□□ 2.47
GLI3-202ENST00000428534 IL6STP40189 918 aaPredicted RBP30.46■■■□□ 2.47
GLI3-202ENST00000428534 HOXB7P09629 217 aa30.45■■■□□ 2.47
GLI3-202ENST00000428534 ARHGEF1Q92888 912 aaKnown RBP30.45■■■□□ 2.47
GLI3-202ENST00000428534 MBIPQ9NS73 344 aa30.45■■■□□ 2.47
GLI3-202ENST00000428534 ZBTB1Q9Y2K1 713 aa30.45■■■□□ 2.47
GLI3-202ENST00000428534 SALL2Q9Y467 1007 aaPredicted RBP30.45■■■□□ 2.47
GLI3-202ENST00000428534 SOS1Q07889 1333 aaPredicted RBP30.45■■■□□ 2.46
GLI3-202ENST00000428534 CANXP27824 592 aaKnown RBP30.44■■■□□ 2.46
GLI3-202ENST00000428534 POLD1P28340 1107 aa30.43■■■□□ 2.46
GLI3-202ENST00000428534 ERBB4Q15303 1308 aa30.43■■■□□ 2.46
GLI3-202ENST00000428534 MYH14Q7Z406 1995 aaKnown RBP30.41■■■□□ 2.46
GLI3-202ENST00000428534 PRAMEF22A3QJZ6 481 aa30.41■■■□□ 2.46
GLI3-202ENST00000428534 ZPR1O75312 459 aa30.41■■■□□ 2.46
GLI3-202ENST00000428534 A1BGP04217 495 aa30.41■■■□□ 2.46
GLI3-202ENST00000428534 EIF5P55010 431 aaKnown RBP30.41■■■□□ 2.46
GLI3-202ENST00000428534 AMIGO3Q86WK7 504 aa30.41■■■□□ 2.46
GLI3-202ENST00000428534 NLGN1Q8N2Q7 840 aa30.4■■■□□ 2.46
GLI3-202ENST00000428534 COL15A1P39059 1388 aa30.4■■■□□ 2.46
GLI3-202ENST00000428534 SENP3-EIF4A1A0A087X0R7 540 aa30.38■■■□□ 2.45
GLI3-202ENST00000428534 LAMB4A4D0S4 1761 aa30.37■■■□□ 2.45
GLI3-202ENST00000428534 MYH16Q9H6N6 1097 aa30.37■■■□□ 2.45
GLI3-202ENST00000428534 NARFQ9UHQ1 456 aa30.37■■■□□ 2.45
GLI3-202ENST00000428534 SMIM5Q71RC9 77 aa30.36■■■□□ 2.45
GLI3-202ENST00000428534 ZNF784Q8NCA9 323 aaPredicted RBP30.36■■■□□ 2.45
GLI3-202ENST00000428534 KLHL34Q8N239 644 aa30.35■■■□□ 2.45
GLI3-202ENST00000428534 USP42Q9H9J4 1324 aaKnown RBP30.35■■■□□ 2.45
GLI3-202ENST00000428534 EIF2S2P20042 333 aaKnown RBP30.34■■■□□ 2.45
GLI3-202ENST00000428534 DUSP27Q5VZP5 1158 aa30.34■■■□□ 2.45
GLI3-202ENST00000428534 ZNF330Q9Y3S2 320 aaPredicted RBP30.34■■■□□ 2.45
GLI3-202ENST00000428534 GOLGA2Q08379 1002 aa30.33■■■□□ 2.45
GLI3-202ENST00000428534 ZNF521Q96K83 1311 aa30.32■■■□□ 2.44
GLI3-202ENST00000428534 GYS1P13807 737 aa30.32■■■□□ 2.44
GLI3-202ENST00000428534 NBPF26B4DH59 902 aa30.3■■■□□ 2.44
GLI3-202ENST00000428534 RGL2O15211 777 aa30.3■■■□□ 2.44
GLI3-202ENST00000428534 HDGFL1Q5TGJ6 251 aa30.3■■■□□ 2.44
GLI3-202ENST00000428534 NBPF10Q6P3W6 841 aaKnown RBP30.3■■■□□ 2.44
GLI3-202ENST00000428534 NBPF15Q8N660 670 aa30.3■■■□□ 2.44
GLI3-202ENST00000428534 USPL1Q5W0Q7 1092 aa30.29■■■□□ 2.44
GLI3-202ENST00000428534 MSL1Q68DK7 614 aa30.29■■■□□ 2.44
GLI3-202ENST00000428534 DZIP3Q86Y13 1208 aaKnown RBP30.29■■■□□ 2.44
GLI3-202ENST00000428534 TSR2Q969E8 191 aaKnown RBP30.29■■■□□ 2.44
GLI3-202ENST00000428534 E9PSI1 815 aa30.28■■■□□ 2.44
GLI3-202ENST00000428534 KRT24Q2M2I5 525 aa30.28■■■□□ 2.44
GLI3-202ENST00000428534 DBF4Q9UBU7 674 aaPredicted RBP30.28■■■□□ 2.44
GLI3-202ENST00000428534 SRP68Q9UHB9 627 aaKnown RBP30.28■■■□□ 2.44
GLI3-202ENST00000428534 FANCIQ9NVI1 1328 aa30.27■■■□□ 2.44
GLI3-202ENST00000428534 GPR162Q16538 588 aa30.27■■■□□ 2.44
GLI3-202ENST00000428534 NLGN2Q8NFZ4 835 aa30.27■■■□□ 2.44
GLI3-202ENST00000428534 DDX21Q9NR30 783 aaKnown RBP eCLIP30.27■■■□□ 2.44
GLI3-202ENST00000428534 ZNF652Q9Y2D9 606 aa30.27■■■□□ 2.44
GLI3-202ENST00000428534 C4AP0C0L4 1744 aa30.27■■■□□ 2.44
GLI3-202ENST00000428534 CLEC4GQ6UXB4 293 aa30.26■■■□□ 2.43
GLI3-202ENST00000428534 TBC1D2BQ9UPU7 963 aa30.26■■■□□ 2.43
GLI3-202ENST00000428534 MYL6BP14649 208 aa30.25■■■□□ 2.43
GLI3-202ENST00000428534 PIP4K2AP48426 406 aaPredicted RBP30.25■■■□□ 2.43
GLI3-202ENST00000428534 CCDC30Q5VVM6 783 aa30.25■■■□□ 2.43
GLI3-202ENST00000428534 KIF6Q6ZMV9 814 aa30.25■■■□□ 2.43
GLI3-202ENST00000428534 C8orf58Q8NAV2 365 aa30.25■■■□□ 2.43
GLI3-202ENST00000428534 PARP3Q9Y6F1 533 aa30.24■■■□□ 2.43
GLI3-202ENST00000428534 ERVV-1B6SEH8 477 aa30.23■■■□□ 2.43
GLI3-202ENST00000428534 ELL2O00472 640 aaPredicted RBP30.23■■■□□ 2.43
GLI3-202ENST00000428534 TWISTNBQ3B726 338 aaPredicted RBP30.23■■■□□ 2.43
GLI3-202ENST00000428534 HYPKQ9NX55 129 aa30.23■■■□□ 2.43
GLI3-202ENST00000428534 MMP10P09238 476 aa30.22■■■□□ 2.43
GLI3-202ENST00000428534 FKBP8Q14318 412 aa30.22■■■□□ 2.43
GLI3-202ENST00000428534 PDIA6Q15084 440 aa30.22■■■□□ 2.43
GLI3-202ENST00000428534 PELP1Q8IZL8 1130 aaKnown RBP30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms