RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 TFIP11Q9UBB9 837 aaKnown RBP4.18□□□□□ -1.74
RGPD1-203ENST00000428128 RALGAPBQ86X10 1494 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 SETD5Q9C0A6 1442 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 EFCAB3Q8N7B9 438 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 VTI1AQ96AJ9 217 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 CCDC136Q96JN2 1154 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 COMMD10Q9Y6G5 202 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 ATP9BO43861 1147 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 BDNFP23560 247 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 ABL2P42684 1182 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 RHBDL3P58872 404 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 JAZF1Q86VZ6 243 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 SVIPQ8NHG7 77 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 ZNF69Q9UC07 566 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 LIMD1Q9UGP4 676 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 BCL9O00512 1426 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 NOS1P29475 1434 aa4.17□□□□□ -1.74
RGPD1-203ENST00000428128 TBX4P57082 545 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 EVA1CP58658 441 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 SERINC3Q13530 473 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 PLEKHG4Q58EX7 1191 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 CCAR1Q8IX12 1150 aaKnown RBP4.16□□□□□ -1.74
RGPD1-203ENST00000428128 CNPY4Q8N129 248 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 NPDC1Q9NQX5 325 aaPredicted RBP4.16□□□□□ -1.74
RGPD1-203ENST00000428128 ZFYVE9O95405 1425 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 YTHDC2Q9H6S0 1430 aaKnown RBP4.16□□□□□ -1.74
RGPD1-203ENST00000428128 XRCC5P13010 732 aaKnown RBP4.16□□□□□ -1.74
RGPD1-203ENST00000428128 LMOD1P29536 600 aaPredicted RBP4.16□□□□□ -1.74
RGPD1-203ENST00000428128 VPS72Q15906 364 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 CASS4Q9NQ75 786 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 DDX56Q9NY93 547 aaKnown RBP4.16□□□□□ -1.74
RGPD1-203ENST00000428128 PRKAB1Q9Y478 270 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 COL4A3BPQ9Y5P4 624 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 KIAA1551Q9HCM1 1747 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 ASTLQ6HA08 431 aaPredicted RBP4.16□□□□□ -1.74
RGPD1-203ENST00000428128 C11orf96Q7Z7L8 435 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 BACH2Q9BYV9 841 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 SWAP70Q9UH65 585 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 LMO7Q8WWI1 1683 aa4.16□□□□□ -1.74
RGPD1-203ENST00000428128 COL14A1Q05707 1796 aaKnown RBP4.15□□□□□ -1.74
RGPD1-203ENST00000428128 PPP1R3GB7ZBB8 358 aa4.15□□□□□ -1.74
RGPD1-203ENST00000428128 ZFYVE27Q5T4F4 411 aa4.15□□□□□ -1.74
RGPD1-203ENST00000428128 TAS1R3Q7RTX0 852 aa4.15□□□□□ -1.74
RGPD1-203ENST00000428128 ZNF710Q8N1W2 664 aa4.15□□□□□ -1.74
RGPD1-203ENST00000428128 TRIM34Q9BYJ4 488 aa4.15□□□□□ -1.74
RGPD1-203ENST00000428128 CLIP1P30622 1438 aa4.15□□□□□ -1.74
RGPD1-203ENST00000428128 ARFGEF2Q9Y6D5 1785 aa4.15□□□□□ -1.74
RGPD1-203ENST00000428128 FOXD4Q12950 439 aaPredicted RBP4.15□□□□□ -1.75
RGPD1-203ENST00000428128 UBE4AQ14139 1066 aa4.15□□□□□ -1.75
RGPD1-203ENST00000428128 AMOTL1Q8IY63 956 aa4.15□□□□□ -1.75
RGPD1-203ENST00000428128 TMC2Q8TDI7 906 aa4.15□□□□□ -1.75
RGPD1-203ENST00000428128 PRKAG2Q9UGJ0 569 aa4.15□□□□□ -1.75
RGPD1-203ENST00000428128 ARHGAP35Q9NRY4 1499 aa4.15□□□□□ -1.75
RGPD1-203ENST00000428128 PTPRUQ92729 1446 aa4.15□□□□□ -1.75
RGPD1-203ENST00000428128 FAM196BA6NMK8 535 aa4.15□□□□□ -1.75
RGPD1-203ENST00000428128 TAGLNQ01995 201 aaKnown RBP4.15□□□□□ -1.75
RGPD1-203ENST00000428128 PRPF38BQ5VTL8 546 aaKnown RBP4.15□□□□□ -1.75
RGPD1-203ENST00000428128 PRR7Q8TB68 274 aa4.15□□□□□ -1.75
RGPD1-203ENST00000428128 FRMD6Q96NE9 622 aa4.15□□□□□ -1.75
RGPD1-203ENST00000428128 CCDC85AQ96PX6 553 aaPredicted RBP4.15□□□□□ -1.75
RGPD1-203ENST00000428128 SPOCK3Q9BQ16 436 aa4.15□□□□□ -1.75
RGPD1-203ENST00000428128 POLR3EQ9NVU0 708 aa4.15□□□□□ -1.75
RGPD1-203ENST00000428128 CHD4Q14839 1912 aa4.15□□□□□ -1.75
RGPD1-203ENST00000428128 E9PCH4 1651 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 PTCH1Q13635 1447 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 A6NJY4 79 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 FANCCQ00597 558 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 RIC3Q7Z5B4 369 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 OSBPL2Q9H1P3 480 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 MYT1LQ9UL68 1186 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 A2MP01023 1474 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 CD44P16070 742 aaKnown RBP4.14□□□□□ -1.75
RGPD1-203ENST00000428128 RFX1P22670 979 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 FOXK1P85037 733 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 FAM50AQ14320 339 aaKnown RBP4.14□□□□□ -1.75
RGPD1-203ENST00000428128 SLC39A7Q92504 469 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 APBA2Q99767 749 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 TANGO6Q9C0B7 1094 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 ASXL1Q8IXJ9 1541 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 DUOX1Q9NRD9 1551 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 PEX14O75381 377 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 NPR3P17342 541 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 MAN1A1P33908 653 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 FOXD4L6Q3SYB3 417 aaPredicted RBP4.14□□□□□ -1.75
RGPD1-203ENST00000428128 FOXD4L3Q6VB84 417 aaPredicted RBP4.14□□□□□ -1.75
RGPD1-203ENST00000428128 SPC25Q9HBM1 224 aa4.14□□□□□ -1.75
RGPD1-203ENST00000428128 DLC1Q96QB1 1528 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 NUTM2FA1L443 756 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 NEFMP07197 916 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 IBSPP21815 317 aaPredicted RBP4.13□□□□□ -1.75
RGPD1-203ENST00000428128 NBPF6Q5VWK0 638 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 RSBN1LQ6PCB5 846 aaPredicted RBP4.13□□□□□ -1.75
RGPD1-203ENST00000428128 STK32AQ8WU08 396 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 SNRNP27Q8WVK2 155 aaKnown RBP4.13□□□□□ -1.75
RGPD1-203ENST00000428128 ZNF512BQ96KM6 892 aaPredicted RBP4.13□□□□□ -1.75
RGPD1-203ENST00000428128 NBPF4Q96M43 638 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 NRBP1Q9UHY1 535 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 DLEC1Q9Y238 1755 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 PDGFRBP09619 1106 aa4.13□□□□□ -1.75
RGPD1-203ENST00000428128 ATP2B1P20020 1258 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms