RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 SNRPA1P09661 255 aaKnown RBP28.13■■■□□ 2.09
RPUSD3-205ENST00000427174 SMIM5Q71RC9 77 aa28.13■■■□□ 2.09
RPUSD3-205ENST00000427174 FLAD1Q8NFF5 587 aa28.13■■■□□ 2.09
RPUSD3-205ENST00000427174 CCDC87Q9NVE4 849 aa28.13■■■□□ 2.09
RPUSD3-205ENST00000427174 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.11■■■□□ 2.09
RPUSD3-205ENST00000427174 CALD1Q05682 793 aaKnown RBP28.11■■■□□ 2.09
RPUSD3-205ENST00000427174 NGEFQ8N5V2 710 aa28.11■■■□□ 2.09
RPUSD3-205ENST00000427174 IFT57Q9NWB7 429 aa28.11■■■□□ 2.09
RPUSD3-205ENST00000427174 USP16Q9Y5T5 823 aa28.11■■■□□ 2.09
RPUSD3-205ENST00000427174 GIGYF1O75420 1035 aaPredicted RBP28.1■■■□□ 2.09
RPUSD3-205ENST00000427174 STARD3NLO95772 234 aa28.1■■■□□ 2.09
RPUSD3-205ENST00000427174 RTCBQ9Y3I0 505 aaKnown RBP28.1■■■□□ 2.09
RPUSD3-205ENST00000427174 SLC16A10Q8TF71 515 aa28.09■■■□□ 2.09
RPUSD3-205ENST00000427174 ZBTB1Q9Y2K1 713 aa28.09■■■□□ 2.09
RPUSD3-205ENST00000427174 ADRA2BP18089 450 aa28.08■■■□□ 2.09
RPUSD3-205ENST00000427174 SOS1Q07889 1333 aaPredicted RBP28.08■■■□□ 2.09
RPUSD3-205ENST00000427174 PHF14O94880 888 aa28.07■■■□□ 2.08
RPUSD3-205ENST00000427174 GNAI1P63096 354 aa28.07■■■□□ 2.08
RPUSD3-205ENST00000427174 MBIPQ9NS73 344 aa28.07■■■□□ 2.08
RPUSD3-205ENST00000427174 LAS1LQ9Y4W2 734 aaKnown RBP28.07■■■□□ 2.08
RPUSD3-205ENST00000427174 IL16Q14005 1332 aa28.07■■■□□ 2.08
RPUSD3-205ENST00000427174 MTFR1LQ9H019 292 aa28.06■■■□□ 2.08
RPUSD3-205ENST00000427174 ZBTB7AO95365 584 aa28.05■■■□□ 2.08
RPUSD3-205ENST00000427174 ZNF521Q96K83 1311 aa28.05■■■□□ 2.08
RPUSD3-205ENST00000427174 A1BGP04217 495 aa28.04■■■□□ 2.08
RPUSD3-205ENST00000427174 TRAPPC3LQ5T215 181 aa28.04■■■□□ 2.08
RPUSD3-205ENST00000427174 WDR63Q8IWG1 891 aa28.04■■■□□ 2.08
RPUSD3-205ENST00000427174 ARHGEF1Q92888 912 aaKnown RBP28.04■■■□□ 2.08
RPUSD3-205ENST00000427174 SGIP1Q9BQI5 828 aa28.04■■■□□ 2.08
RPUSD3-205ENST00000427174 SALL2Q9Y467 1007 aaPredicted RBP28.04■■■□□ 2.08
RPUSD3-205ENST00000427174 EIF5P55010 431 aaKnown RBP28.03■■■□□ 2.08
RPUSD3-205ENST00000427174 COL15A1P39059 1388 aa28.02■■■□□ 2.08
RPUSD3-205ENST00000427174 PTGER2P43116 358 aa28.02■■■□□ 2.08
RPUSD3-205ENST00000427174 KRT24Q2M2I5 525 aa28.02■■■□□ 2.08
RPUSD3-205ENST00000427174 SPON1Q9HCB6 807 aa28.02■■■□□ 2.08
RPUSD3-205ENST00000427174 BCORQ6W2J9 1755 aa28.01■■■□□ 2.07
RPUSD3-205ENST00000427174 NBPF26B4DH59 902 aa28■■■□□ 2.07
RPUSD3-205ENST00000427174 MSH5O43196 834 aa28■■■□□ 2.07
RPUSD3-205ENST00000427174 CANXP27824 592 aaKnown RBP28■■■□□ 2.07
RPUSD3-205ENST00000427174 IL6STP40189 918 aaPredicted RBP28■■■□□ 2.07
RPUSD3-205ENST00000427174 NBPF10Q6P3W6 841 aaKnown RBP28■■■□□ 2.07
RPUSD3-205ENST00000427174 NBPF15Q8N660 670 aa28■■■□□ 2.07
RPUSD3-205ENST00000427174 ATF5Q9Y2D1 282 aaPredicted RBP28■■■□□ 2.07
RPUSD3-205ENST00000427174 SCN7AQ01118 1682 aa28■■■□□ 2.07
RPUSD3-205ENST00000427174 USP42Q9H9J4 1324 aaKnown RBP27.97■■■□□ 2.07
RPUSD3-205ENST00000427174 HOXB7P09629 217 aa27.97■■■□□ 2.07
RPUSD3-205ENST00000427174 SPINK5Q9NQ38 1064 aaPredicted RBP27.97■■■□□ 2.07
RPUSD3-205ENST00000427174 RFC4P35249 363 aa27.96■■■□□ 2.07
RPUSD3-205ENST00000427174 TSR2Q969E8 191 aaKnown RBP27.96■■■□□ 2.07
RPUSD3-205ENST00000427174 GYS1P13807 737 aa27.95■■■□□ 2.06
RPUSD3-205ENST00000427174 PIP4K2AP48426 406 aaPredicted RBP27.95■■■□□ 2.06
RPUSD3-205ENST00000427174 ERBB4Q15303 1308 aa27.94■■■□□ 2.06
RPUSD3-205ENST00000427174 SRP68Q9UHB9 627 aaKnown RBP27.94■■■□□ 2.06
RPUSD3-205ENST00000427174 NARFQ9UHQ1 456 aa27.94■■■□□ 2.06
RPUSD3-205ENST00000427174 DUSP27Q5VZP5 1158 aa27.93■■■□□ 2.06
RPUSD3-205ENST00000427174 C8orf58Q8NAV2 365 aa27.93■■■□□ 2.06
RPUSD3-205ENST00000427174 FANCIQ9NVI1 1328 aa27.92■■■□□ 2.06
RPUSD3-205ENST00000427174 PDIA6Q15084 440 aa27.92■■■□□ 2.06
RPUSD3-205ENST00000427174 MSL1Q68DK7 614 aa27.92■■■□□ 2.06
RPUSD3-205ENST00000427174 LRP10Q7Z4F1 713 aa27.92■■■□□ 2.06
RPUSD3-205ENST00000427174 NUP98P52948 1817 aa27.91■■■□□ 2.06
RPUSD3-205ENST00000427174 A0A087WZG4 1122 aa27.91■■■□□ 2.06
RPUSD3-205ENST00000427174 CACNA1FO60840 1977 aa27.9■■■□□ 2.06
RPUSD3-205ENST00000427174 BCL2L12Q9HB09 334 aa27.9■■■□□ 2.06
RPUSD3-205ENST00000427174 EIF2S2P20042 333 aaKnown RBP27.89■■■□□ 2.06
RPUSD3-205ENST00000427174 USPL1Q5W0Q7 1092 aa27.89■■■□□ 2.06
RPUSD3-205ENST00000427174 NLGN1Q8N2Q7 840 aa27.88■■■□□ 2.05
RPUSD3-205ENST00000427174 TSPYL6Q8N831 410 aa27.88■■■□□ 2.05
RPUSD3-205ENST00000427174 AFDNP55196 1824 aaKnown RBP27.88■■■□□ 2.05
RPUSD3-205ENST00000427174 ZPR1O75312 459 aa27.87■■■□□ 2.05
RPUSD3-205ENST00000427174 FKBP8Q14318 412 aa27.87■■■□□ 2.05
RPUSD3-205ENST00000427174 TBC1D2BQ9UPU7 963 aa27.87■■■□□ 2.05
RPUSD3-205ENST00000427174 ZNF330Q9Y3S2 320 aaPredicted RBP27.87■■■□□ 2.05
RPUSD3-205ENST00000427174 CAMTA2O94983 1202 aa27.86■■■□□ 2.05
RPUSD3-205ENST00000427174 POLD1P28340 1107 aa27.86■■■□□ 2.05
RPUSD3-205ENST00000427174 PROSER3Q2NL68 480 aa27.86■■■□□ 2.05
RPUSD3-205ENST00000427174 HDGFL1Q5TGJ6 251 aa27.86■■■□□ 2.05
RPUSD3-205ENST00000427174 KIF13BQ9NQT8 1826 aa27.85■■■□□ 2.05
RPUSD3-205ENST00000427174 NRXN2Q9P2S2 1712 aa27.85■■■□□ 2.05
RPUSD3-205ENST00000427174 ELL2O00472 640 aaPredicted RBP27.85■■■□□ 2.05
RPUSD3-205ENST00000427174 GOLGA2Q08379 1002 aa27.85■■■□□ 2.05
RPUSD3-205ENST00000427174 DZIP3Q86Y13 1208 aaKnown RBP27.85■■■□□ 2.05
RPUSD3-205ENST00000427174 NECTIN2Q92692 538 aa27.85■■■□□ 2.05
RPUSD3-205ENST00000427174 MYH16Q9H6N6 1097 aa27.85■■■□□ 2.05
RPUSD3-205ENST00000427174 ARXQ96QS3 562 aa27.84■■■□□ 2.05
RPUSD3-205ENST00000427174 DDX21Q9NR30 783 aaKnown RBP eCLIP27.84■■■□□ 2.05
RPUSD3-205ENST00000427174 MYL6BP14649 208 aa27.83■■■□□ 2.05
RPUSD3-205ENST00000427174 TM4SF1P30408 202 aa27.83■■■□□ 2.05
RPUSD3-205ENST00000427174 RGL2O15211 777 aa27.82■■■□□ 2.04
RPUSD3-205ENST00000427174 ANXA1P04083 346 aa27.82■■■□□ 2.04
RPUSD3-205ENST00000427174 MMP10P09238 476 aa27.82■■■□□ 2.04
RPUSD3-205ENST00000427174 SLFN5Q08AF3 891 aa27.82■■■□□ 2.04
RPUSD3-205ENST00000427174 NPM2Q86SE8 214 aaKnown RBP27.82■■■□□ 2.04
RPUSD3-205ENST00000427174 CHPF2Q9P2E5 772 aa27.82■■■□□ 2.04
RPUSD3-205ENST00000427174 EXOSC9Q06265 439 aaKnown RBP27.81■■■□□ 2.04
RPUSD3-205ENST00000427174 TWISTNBQ3B726 338 aaPredicted RBP27.81■■■□□ 2.04
RPUSD3-205ENST00000427174 TRMT2AQ8IZ69 625 aaKnown RBP27.81■■■□□ 2.04
RPUSD3-205ENST00000427174 E9PSI1 815 aa27.8■■■□□ 2.04
RPUSD3-205ENST00000427174 TTLL7Q6ZT98 887 aa27.8■■■□□ 2.04
RPUSD3-205ENST00000427174 DBF4Q9UBU7 674 aaPredicted RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms