RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 CCDC87Q9NVE4 849 aa28.51■■■□□ 2.15
HMGA2-205ENST00000425208 PNPLA7Q6ZV29 1317 aa28.5■■■□□ 2.15
HMGA2-205ENST00000425208 PRAMEF22A3QJZ6 481 aa28.5■■■□□ 2.15
HMGA2-205ENST00000425208 CASZ1Q86V15 1759 aa28.5■■■□□ 2.15
HMGA2-205ENST00000425208 SSFA2P28290 1259 aa28.49■■■□□ 2.15
HMGA2-205ENST00000425208 FLAD1Q8NFF5 587 aa28.49■■■□□ 2.15
HMGA2-205ENST00000425208 RTCBQ9Y3I0 505 aaKnown RBP28.49■■■□□ 2.15
HMGA2-205ENST00000425208 INTS5Q6P9B9 1019 aaKnown RBP28.48■■■□□ 2.15
HMGA2-205ENST00000425208 USP16Q9Y5T5 823 aa28.48■■■□□ 2.15
HMGA2-205ENST00000425208 PHF14O94880 888 aa28.47■■■□□ 2.15
HMGA2-205ENST00000425208 RPS6KA4O75676 772 aa28.46■■■□□ 2.15
HMGA2-205ENST00000425208 ZBTB1Q9Y2K1 713 aa28.46■■■□□ 2.15
HMGA2-205ENST00000425208 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.45■■■□□ 2.15
HMGA2-205ENST00000425208 AMIGO3Q86WK7 504 aa28.45■■■□□ 2.15
HMGA2-205ENST00000425208 TSR2Q969E8 191 aaKnown RBP28.45■■■□□ 2.15
HMGA2-205ENST00000425208 HNRNPUQ00839 825 aaKnown RBP eCLIP28.44■■■□□ 2.146e-6■□□□□ 8.3
HMGA2-205ENST00000425208 KRT24Q2M2I5 525 aa28.44■■■□□ 2.14
HMGA2-205ENST00000425208 ADRA2BP18089 450 aa28.43■■■□□ 2.14
HMGA2-205ENST00000425208 PDGFDQ9GZP0 370 aaPredicted RBP28.43■■■□□ 2.14
HMGA2-205ENST00000425208 MYH16Q9H6N6 1097 aa28.43■■■□□ 2.14
HMGA2-205ENST00000425208 FANCIQ9NVI1 1328 aa28.43■■■□□ 2.14
HMGA2-205ENST00000425208 MSH5O43196 834 aa28.43■■■□□ 2.14
HMGA2-205ENST00000425208 A1BGP04217 495 aa28.43■■■□□ 2.14
HMGA2-205ENST00000425208 CANXP27824 592 aaKnown RBP28.43■■■□□ 2.14
HMGA2-205ENST00000425208 GOLGA2Q08379 1002 aa28.43■■■□□ 2.14
HMGA2-205ENST00000425208 COL23A1Q86Y22 540 aaPredicted RBP28.43■■■□□ 2.14
HMGA2-205ENST00000425208 SOS1Q07889 1333 aaPredicted RBP28.42■■■□□ 2.14
HMGA2-205ENST00000425208 C4AP0C0L4 1744 aa28.42■■■□□ 2.14
HMGA2-205ENST00000425208 HOXB7P09629 217 aa28.42■■■□□ 2.14
HMGA2-205ENST00000425208 TRAPPC3LQ5T215 181 aa28.42■■■□□ 2.14
HMGA2-205ENST00000425208 SMIM5Q71RC9 77 aa28.42■■■□□ 2.14
HMGA2-205ENST00000425208 SPINK5Q9NQ38 1064 aaPredicted RBP28.41■■■□□ 2.14
HMGA2-205ENST00000425208 COL15A1P39059 1388 aa28.4■■■□□ 2.14
HMGA2-205ENST00000425208 DUSP27Q5VZP5 1158 aa28.4■■■□□ 2.14
HMGA2-205ENST00000425208 IL6STP40189 918 aaPredicted RBP28.39■■■□□ 2.14
HMGA2-205ENST00000425208 EIF2S2P20042 333 aaKnown RBP28.38■■■□□ 2.13
HMGA2-205ENST00000425208 NPM2Q86SE8 214 aaKnown RBP28.38■■■□□ 2.13
HMGA2-205ENST00000425208 SLC16A10Q8TF71 515 aa28.38■■■□□ 2.13
HMGA2-205ENST00000425208 E9PSI1 815 aa28.37■■■□□ 2.13
HMGA2-205ENST00000425208 ARHGEF1Q92888 912 aaKnown RBP28.37■■■□□ 2.13
HMGA2-205ENST00000425208 ZNF330Q9Y3S2 320 aaPredicted RBP28.37■■■□□ 2.13
HMGA2-205ENST00000425208 ERBB4Q15303 1308 aa28.37■■■□□ 2.13
HMGA2-205ENST00000425208 RFC4P35249 363 aa28.36■■■□□ 2.13
HMGA2-205ENST00000425208 PIP4K2AP48426 406 aaPredicted RBP28.36■■■□□ 2.13
HMGA2-205ENST00000425208 EIF5P55010 431 aaKnown RBP28.36■■■□□ 2.13
HMGA2-205ENST00000425208 C8orf58Q8NAV2 365 aa28.36■■■□□ 2.13
HMGA2-205ENST00000425208 ELL2O00472 640 aaPredicted RBP28.35■■■□□ 2.13
HMGA2-205ENST00000425208 ZBTB7AO95365 584 aa28.35■■■□□ 2.13
HMGA2-205ENST00000425208 HDGFL1Q5TGJ6 251 aa28.35■■■□□ 2.13
HMGA2-205ENST00000425208 NBPF26B4DH59 902 aa28.35■■■□□ 2.13
HMGA2-205ENST00000425208 NBPF10Q6P3W6 841 aaKnown RBP28.35■■■□□ 2.13
HMGA2-205ENST00000425208 NBPF15Q8N660 670 aa28.35■■■□□ 2.13
HMGA2-205ENST00000425208 MTFR1LQ9H019 292 aa28.35■■■□□ 2.13
HMGA2-205ENST00000425208 A0A087WZG4 1122 aa28.34■■■□□ 2.13
HMGA2-205ENST00000425208 NECTIN2Q92692 538 aa28.33■■■□□ 2.13
HMGA2-205ENST00000425208 SLFN5Q08AF3 891 aa28.32■■■□□ 2.12
HMGA2-205ENST00000425208 TWISTNBQ3B726 338 aaPredicted RBP28.32■■■□□ 2.12
HMGA2-205ENST00000425208 TSPYL6Q8N831 410 aa28.32■■■□□ 2.12
HMGA2-205ENST00000425208 CHMP4AQ9BY43 222 aa28.32■■■□□ 2.12
HMGA2-205ENST00000425208 EXOSC9Q06265 439 aaKnown RBP28.31■■■□□ 2.12
HMGA2-205ENST00000425208 CDCA7LQ96GN5 454 aa28.31■■■□□ 2.12
HMGA2-205ENST00000425208 USP42Q9H9J4 1324 aaKnown RBP28.31■■■□□ 2.12
HMGA2-205ENST00000425208 ZPR1O75312 459 aa28.3■■■□□ 2.12
HMGA2-205ENST00000425208 MYL6BP14649 208 aa28.3■■■□□ 2.12
HMGA2-205ENST00000425208 SPON1Q9HCB6 807 aa28.3■■■□□ 2.12
HMGA2-205ENST00000425208 ZBED9Q6R2W3 1325 aa28.3■■■□□ 2.12
HMGA2-205ENST00000425208 NARFQ9UHQ1 456 aa28.29■■■□□ 2.12
HMGA2-205ENST00000425208 COL24A1Q17RW2 1714 aa28.29■■■□□ 2.12
HMGA2-205ENST00000425208 SCN7AQ01118 1682 aa28.28■■■□□ 2.12
HMGA2-205ENST00000425208 ARXQ96QS3 562 aa28.28■■■□□ 2.12
HMGA2-205ENST00000425208 CHPF2Q9P2E5 772 aa28.28■■■□□ 2.12
HMGA2-205ENST00000425208 ATF5Q9Y2D1 282 aaPredicted RBP28.28■■■□□ 2.12
HMGA2-205ENST00000425208 PDIA6Q15084 440 aa28.27■■■□□ 2.12
HMGA2-205ENST00000425208 MSL1Q68DK7 614 aa28.27■■■□□ 2.12
HMGA2-205ENST00000425208 DDX21Q9NR30 783 aaKnown RBP eCLIP28.27■■■□□ 2.12
HMGA2-205ENST00000425208 DBF4Q9UBU7 674 aaPredicted RBP28.27■■■□□ 2.12
HMGA2-205ENST00000425208 SRP68Q9UHB9 627 aaKnown RBP28.27■■■□□ 2.12
HMGA2-205ENST00000425208 LRP5O75197 1615 aa28.27■■■□□ 2.12
HMGA2-205ENST00000425208 BCORQ6W2J9 1755 aa28.27■■■□□ 2.12
HMGA2-205ENST00000425208 CCDC30Q5VVM6 783 aa28.26■■■□□ 2.12
HMGA2-205ENST00000425208 DZIP3Q86Y13 1208 aaKnown RBP28.26■■■□□ 2.12
HMGA2-205ENST00000425208 TBC1D2BQ9UPU7 963 aa28.26■■■□□ 2.12
HMGA2-205ENST00000425208 GYS1P13807 737 aa28.26■■■□□ 2.11
HMGA2-205ENST00000425208 PROSER3Q2NL68 480 aa28.26■■■□□ 2.11
HMGA2-205ENST00000425208 USPL1Q5W0Q7 1092 aa28.26■■■□□ 2.11
HMGA2-205ENST00000425208 ANXA1P04083 346 aa28.25■■■□□ 2.11
HMGA2-205ENST00000425208 TRMT2AQ8IZ69 625 aaKnown RBP28.24■■■□□ 2.11
HMGA2-205ENST00000425208 NLGN1Q8N2Q7 840 aa28.24■■■□□ 2.11
HMGA2-205ENST00000425208 SRCAPQ6ZRS2 3230 aa28.24■■■□□ 2.11
HMGA2-205ENST00000425208 POLD1P28340 1107 aa28.23■■■□□ 2.11
HMGA2-205ENST00000425208 LRP10Q7Z4F1 713 aa28.23■■■□□ 2.11
HMGA2-205ENST00000425208 VAMP4O75379 141 aa28.22■■■□□ 2.11
HMGA2-205ENST00000425208 KIF6Q6ZMV9 814 aa28.22■■■□□ 2.11
HMGA2-205ENST00000425208 HYPKQ9NX55 129 aa28.22■■■□□ 2.11
HMGA2-205ENST00000425208 CAMTA2O94983 1202 aa28.21■■■□□ 2.11
HMGA2-205ENST00000425208 PTGER2P43116 358 aa28.21■■■□□ 2.11
HMGA2-205ENST00000425208 STK31Q9BXU1 1019 aa28.21■■■□□ 2.11
HMGA2-205ENST00000425208 CACNA1FO60840 1977 aa28.2■■■□□ 2.11
HMGA2-205ENST00000425208 SGIP1Q9BQI5 828 aa28.2■■■□□ 2.11
HMGA2-205ENST00000425208 FKBP8Q14318 412 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms