RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 TUBGCP6Q96RT7 1819 aa26.75■■□□□ 1.87
PMS1-211ENST00000424766 PRAMEF22A3QJZ6 481 aa26.75■■□□□ 1.87
PMS1-211ENST00000424766 RPS6KA4O75676 772 aa26.75■■□□□ 1.87
PMS1-211ENST00000424766 INTS5Q6P9B9 1019 aaKnown RBP26.75■■□□□ 1.87
PMS1-211ENST00000424766 LAMB4A4D0S4 1761 aa26.74■■□□□ 1.87
PMS1-211ENST00000424766 FLAD1Q8NFF5 587 aa26.74■■□□□ 1.87
PMS1-211ENST00000424766 MYH16Q9H6N6 1097 aa26.74■■□□□ 1.87
PMS1-211ENST00000424766 GNPATO15228 680 aa26.73■■□□□ 1.87
PMS1-211ENST00000424766 HOXB7P09629 217 aa26.73■■□□□ 1.87
PMS1-211ENST00000424766 TSR2Q969E8 191 aaKnown RBP26.73■■□□□ 1.87
PMS1-211ENST00000424766 SPINK5Q9NQ38 1064 aaPredicted RBP26.73■■□□□ 1.87
PMS1-211ENST00000424766 RTCBQ9Y3I0 505 aaKnown RBP26.73■■□□□ 1.87
PMS1-211ENST00000424766 PSDA5PKW4 1024 aaPredicted RBP26.71■■□□□ 1.87
PMS1-211ENST00000424766 SSFA2P28290 1259 aa26.71■■□□□ 1.87
PMS1-211ENST00000424766 KRT24Q2M2I5 525 aa26.71■■□□□ 1.87
PMS1-211ENST00000424766 DUSP27Q5VZP5 1158 aa26.71■■□□□ 1.87
PMS1-211ENST00000424766 FANCIQ9NVI1 1328 aa26.7■■□□□ 1.87
PMS1-211ENST00000424766 E9PSI1 815 aa26.7■■□□□ 1.86
PMS1-211ENST00000424766 A1BGP04217 495 aa26.7■■□□□ 1.86
PMS1-211ENST00000424766 SOS1Q07889 1333 aaPredicted RBP26.69■■□□□ 1.86
PMS1-211ENST00000424766 PNPLA7Q6ZV29 1317 aa26.69■■□□□ 1.86
PMS1-211ENST00000424766 ADRA2BP18089 450 aa26.69■■□□□ 1.86
PMS1-211ENST00000424766 SLFN5Q08AF3 891 aa26.69■■□□□ 1.86
PMS1-211ENST00000424766 C8orf58Q8NAV2 365 aa26.69■■□□□ 1.86
PMS1-211ENST00000424766 ZBTB1Q9Y2K1 713 aa26.69■■□□□ 1.86
PMS1-211ENST00000424766 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.67■■□□□ 1.86
PMS1-211ENST00000424766 CANXP27824 592 aaKnown RBP26.67■■□□□ 1.86
PMS1-211ENST00000424766 TRAPPC3LQ5T215 181 aa26.67■■□□□ 1.86
PMS1-211ENST00000424766 AMIGO3Q86WK7 504 aa26.67■■□□□ 1.86
PMS1-211ENST00000424766 COL23A1Q86Y22 540 aaPredicted RBP26.67■■□□□ 1.86
PMS1-211ENST00000424766 CHMP4AQ9BY43 222 aa26.67■■□□□ 1.86
PMS1-211ENST00000424766 EIF2S2P20042 333 aaKnown RBP26.66■■□□□ 1.86
PMS1-211ENST00000424766 IL6STP40189 918 aaPredicted RBP26.66■■□□□ 1.86
PMS1-211ENST00000424766 ERBB4Q15303 1308 aa26.65■■□□□ 1.86
PMS1-211ENST00000424766 EIF5P55010 431 aaKnown RBP26.65■■□□□ 1.86
PMS1-211ENST00000424766 TRMT2AQ8IZ69 625 aaKnown RBP26.65■■□□□ 1.86
PMS1-211ENST00000424766 SLC16A10Q8TF71 515 aa26.65■■□□□ 1.86
PMS1-211ENST00000424766 CDCA7LQ96GN5 454 aa26.65■■□□□ 1.86
PMS1-211ENST00000424766 CASZ1Q86V15 1759 aa26.65■■□□□ 1.86
PMS1-211ENST00000424766 ZBED9Q6R2W3 1325 aa26.65■■□□□ 1.86
PMS1-211ENST00000424766 ELL2O00472 640 aaPredicted RBP26.64■■□□□ 1.86
PMS1-211ENST00000424766 PHF14O94880 888 aa26.64■■□□□ 1.86
PMS1-211ENST00000424766 EXOSC9Q06265 439 aaKnown RBP26.64■■□□□ 1.86
PMS1-211ENST00000424766 SMIM5Q71RC9 77 aa26.64■■□□□ 1.86
PMS1-211ENST00000424766 ARHGEF1Q92888 912 aaKnown RBP26.64■■□□□ 1.86
PMS1-211ENST00000424766 NBPF26B4DH59 902 aa26.63■■□□□ 1.85
PMS1-211ENST00000424766 NBPF10Q6P3W6 841 aaKnown RBP26.63■■□□□ 1.85
PMS1-211ENST00000424766 NBPF15Q8N660 670 aa26.63■■□□□ 1.85
PMS1-211ENST00000424766 TSPYL6Q8N831 410 aa26.63■■□□□ 1.85
PMS1-211ENST00000424766 A0A087WZG4 1122 aa26.62■■□□□ 1.85
PMS1-211ENST00000424766 MSH5O43196 834 aa26.62■■□□□ 1.85
PMS1-211ENST00000424766 TWISTNBQ3B726 338 aaPredicted RBP26.62■■□□□ 1.85
PMS1-211ENST00000424766 HDGFL1Q5TGJ6 251 aa26.62■■□□□ 1.85
PMS1-211ENST00000424766 PDGFDQ9GZP0 370 aaPredicted RBP26.62■■□□□ 1.85
PMS1-211ENST00000424766 RFC4P35249 363 aa26.61■■□□□ 1.85
PMS1-211ENST00000424766 NPM2Q86SE8 214 aaKnown RBP26.61■■□□□ 1.85
PMS1-211ENST00000424766 COL15A1P39059 1388 aa26.6■■□□□ 1.85
PMS1-211ENST00000424766 PIP4K2AP48426 406 aaPredicted RBP26.59■■□□□ 1.85
PMS1-211ENST00000424766 PDIA6Q15084 440 aa26.59■■□□□ 1.85
PMS1-211ENST00000424766 NECTIN2Q92692 538 aa26.59■■□□□ 1.85
PMS1-211ENST00000424766 DDX21Q9NR30 783 aaKnown RBP eCLIP26.59■■□□□ 1.85
PMS1-211ENST00000424766 C4AP0C0L4 1744 aa26.59■■□□□ 1.85
PMS1-211ENST00000424766 VAMP4O75379 141 aa26.58■■□□□ 1.85
PMS1-211ENST00000424766 CCDC30Q5VVM6 783 aa26.58■■□□□ 1.85
PMS1-211ENST00000424766 DBF4Q9UBU7 674 aaPredicted RBP26.58■■□□□ 1.85
PMS1-211ENST00000424766 CACNA1FO60840 1977 aa26.57■■□□□ 1.84
PMS1-211ENST00000424766 MYL6BP14649 208 aa26.56■■□□□ 1.84
PMS1-211ENST00000424766 NARFQ9UHQ1 456 aa26.56■■□□□ 1.84
PMS1-211ENST00000424766 ZNF330Q9Y3S2 320 aaPredicted RBP26.56■■□□□ 1.84
PMS1-211ENST00000424766 ZPR1O75312 459 aa26.55■■□□□ 1.84
PMS1-211ENST00000424766 MTFR1LQ9H019 292 aa26.55■■□□□ 1.84
PMS1-211ENST00000424766 LRP10Q7Z4F1 713 aa26.54■■□□□ 1.84
PMS1-211ENST00000424766 CHPF2Q9P2E5 772 aa26.54■■□□□ 1.84
PMS1-211ENST00000424766 USP42Q9H9J4 1324 aaKnown RBP26.54■■□□□ 1.84
PMS1-211ENST00000424766 PROSER3Q2NL68 480 aa26.53■■□□□ 1.84
PMS1-211ENST00000424766 DZIP3Q86Y13 1208 aaKnown RBP26.53■■□□□ 1.84
PMS1-211ENST00000424766 HYPKQ9NX55 129 aa26.53■■□□□ 1.84
PMS1-211ENST00000424766 TBC1D2BQ9UPU7 963 aa26.53■■□□□ 1.84
PMS1-211ENST00000424766 ZBTB7AO95365 584 aa26.52■■□□□ 1.84
PMS1-211ENST00000424766 COL24A1Q17RW2 1714 aa26.52■■□□□ 1.84
PMS1-211ENST00000424766 SRP68Q9UHB9 627 aaKnown RBP26.52■■□□□ 1.84
PMS1-211ENST00000424766 ANXA1P04083 346 aa26.51■■□□□ 1.83
PMS1-211ENST00000424766 GYS1P13807 737 aa26.51■■□□□ 1.83
PMS1-211ENST00000424766 NLGN1Q8N2Q7 840 aa26.51■■□□□ 1.83
PMS1-211ENST00000424766 ARXQ96QS3 562 aa26.51■■□□□ 1.83
PMS1-211ENST00000424766 SPON1Q9HCB6 807 aa26.51■■□□□ 1.83
PMS1-211ENST00000424766 CT47B1P0C2W7 299 aaPredicted RBP26.5■■□□□ 1.83
PMS1-211ENST00000424766 USPL1Q5W0Q7 1092 aa26.5■■□□□ 1.83
PMS1-211ENST00000424766 STK31Q9BXU1 1019 aa26.5■■□□□ 1.83
PMS1-211ENST00000424766 ATF5Q9Y2D1 282 aaPredicted RBP26.5■■□□□ 1.83
PMS1-211ENST00000424766 RGL2O15211 777 aa26.49■■□□□ 1.83
PMS1-211ENST00000424766 ZNF428Q96B54 188 aa26.49■■□□□ 1.83
PMS1-211ENST00000424766 CAMTA2O94983 1202 aa26.48■■□□□ 1.83
PMS1-211ENST00000424766 COPS6Q7L5N1 327 aa26.48■■□□□ 1.83
PMS1-211ENST00000424766 ERVV-1B6SEH8 477 aa26.47■■□□□ 1.83
PMS1-211ENST00000424766 KIF6Q6ZMV9 814 aa26.47■■□□□ 1.83
PMS1-211ENST00000424766 TTLL7Q6ZT98 887 aa26.47■■□□□ 1.83
PMS1-211ENST00000424766 XAGE3Q8WTP9 111 aa26.47■■□□□ 1.83
PMS1-211ENST00000424766 BCL2L12Q9HB09 334 aa26.47■■□□□ 1.83
PMS1-211ENST00000424766 BCORQ6W2J9 1755 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms