RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 ZNF853P0CG23 659 aa33.02■■■□□ 2.88
TSPAN3-203ENST00000424443 MBIPQ9NS73 344 aa33.02■■■□□ 2.88
TSPAN3-203ENST00000424443 USP16Q9Y5T5 823 aa33.02■■■□□ 2.88
TSPAN3-203ENST00000424443 IL16Q14005 1332 aa33.02■■■□□ 2.88
TSPAN3-203ENST00000424443 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.02■■■□□ 2.88
TSPAN3-203ENST00000424443 PRAMEF22A3QJZ6 481 aa33.02■■■□□ 2.88
TSPAN3-203ENST00000424443 GIGYF1O75420 1035 aaPredicted RBP33.02■■■□□ 2.88
TSPAN3-203ENST00000424443 UBR3Q6ZT12 1888 aa33.01■■■□□ 2.88
TSPAN3-203ENST00000424443 INTS5Q6P9B9 1019 aaKnown RBP33.01■■■□□ 2.87
TSPAN3-203ENST00000424443 MYH14Q7Z406 1995 aaKnown RBP33■■■□□ 2.87
TSPAN3-203ENST00000424443 TRAPPC3LQ5T215 181 aa33■■■□□ 2.87
TSPAN3-203ENST00000424443 COL23A1Q86Y22 540 aaPredicted RBP33■■■□□ 2.87
TSPAN3-203ENST00000424443 PDGFDQ9GZP0 370 aaPredicted RBP33■■■□□ 2.87
TSPAN3-203ENST00000424443 ZBTB1Q9Y2K1 713 aa32.99■■■□□ 2.87
TSPAN3-203ENST00000424443 ADRA2BP18089 450 aa32.98■■■□□ 2.87
TSPAN3-203ENST00000424443 CANXP27824 592 aaKnown RBP32.98■■■□□ 2.87
TSPAN3-203ENST00000424443 NPM2Q86SE8 214 aaKnown RBP32.98■■■□□ 2.87
TSPAN3-203ENST00000424443 SMIM5Q71RC9 77 aa32.97■■■□□ 2.87
TSPAN3-203ENST00000424443 AMIGO3Q86WK7 504 aa32.97■■■□□ 2.87
TSPAN3-203ENST00000424443 SLC16A10Q8TF71 515 aa32.97■■■□□ 2.87
TSPAN3-203ENST00000424443 CASZ1Q86V15 1759 aa32.96■■■□□ 2.87
TSPAN3-203ENST00000424443 A1BGP04217 495 aa32.96■■■□□ 2.87
TSPAN3-203ENST00000424443 ZBTB7AO95365 584 aa32.95■■■□□ 2.87
TSPAN3-203ENST00000424443 RFC4P35249 363 aa32.94■■■□□ 2.86
TSPAN3-203ENST00000424443 LAMB4A4D0S4 1761 aa32.94■■■□□ 2.86
TSPAN3-203ENST00000424443 TSR2Q969E8 191 aaKnown RBP32.93■■■□□ 2.86
TSPAN3-203ENST00000424443 ZNF330Q9Y3S2 320 aaPredicted RBP32.93■■■□□ 2.86
TSPAN3-203ENST00000424443 ARHGEF1Q92888 912 aaKnown RBP32.92■■■□□ 2.86
TSPAN3-203ENST00000424443 MTFR1LQ9H019 292 aa32.92■■■□□ 2.86
TSPAN3-203ENST00000424443 SOS1Q07889 1333 aaPredicted RBP32.92■■■□□ 2.86
TSPAN3-203ENST00000424443 EIF2S2P20042 333 aaKnown RBP32.92■■■□□ 2.86
TSPAN3-203ENST00000424443 KRT24Q2M2I5 525 aa32.92■■■□□ 2.86
TSPAN3-203ENST00000424443 MYH16Q9H6N6 1097 aa32.91■■■□□ 2.86
TSPAN3-203ENST00000424443 SPON1Q9HCB6 807 aa32.91■■■□□ 2.86
TSPAN3-203ENST00000424443 IL6STP40189 918 aaPredicted RBP32.9■■■□□ 2.86
TSPAN3-203ENST00000424443 ATF5Q9Y2D1 282 aaPredicted RBP32.9■■■□□ 2.86
TSPAN3-203ENST00000424443 ZNF521Q96K83 1311 aa32.9■■■□□ 2.86
TSPAN3-203ENST00000424443 COL15A1P39059 1388 aa32.89■■■□□ 2.86
TSPAN3-203ENST00000424443 HOXB7P09629 217 aa32.89■■■□□ 2.86
TSPAN3-203ENST00000424443 DUSP27Q5VZP5 1158 aa32.89■■■□□ 2.86
TSPAN3-203ENST00000424443 A0A087WZG4 1122 aa32.88■■■□□ 2.85
TSPAN3-203ENST00000424443 PIP4K2AP48426 406 aaPredicted RBP32.88■■■□□ 2.85
TSPAN3-203ENST00000424443 HNRNPUQ00839 825 aaKnown RBP eCLIP32.88■■■□□ 2.85
TSPAN3-203ENST00000424443 GOLGA2Q08379 1002 aa32.88■■■□□ 2.85
TSPAN3-203ENST00000424443 ARXQ96QS3 562 aa32.87■■■□□ 2.85
TSPAN3-203ENST00000424443 ELL2O00472 640 aaPredicted RBP32.87■■■□□ 2.85
TSPAN3-203ENST00000424443 ZPR1O75312 459 aa32.87■■■□□ 2.85
TSPAN3-203ENST00000424443 EIF5P55010 431 aaKnown RBP32.87■■■□□ 2.85
TSPAN3-203ENST00000424443 FANCIQ9NVI1 1328 aa32.86■■■□□ 2.85
TSPAN3-203ENST00000424443 NECTIN2Q92692 538 aa32.86■■■□□ 2.85
TSPAN3-203ENST00000424443 HDGFL1Q5TGJ6 251 aa32.85■■■□□ 2.85
TSPAN3-203ENST00000424443 ERBB4Q15303 1308 aa32.85■■■□□ 2.85
TSPAN3-203ENST00000424443 CHMP4AQ9BY43 222 aa32.84■■■□□ 2.85
TSPAN3-203ENST00000424443 SPINK5Q9NQ38 1064 aaPredicted RBP32.84■■■□□ 2.85
TSPAN3-203ENST00000424443 MSL1Q68DK7 614 aa32.83■■■□□ 2.85
TSPAN3-203ENST00000424443 C8orf58Q8NAV2 365 aa32.83■■■□□ 2.85
TSPAN3-203ENST00000424443 C4AP0C0L4 1744 aa32.83■■■□□ 2.85
TSPAN3-203ENST00000424443 NBPF26B4DH59 902 aa32.82■■■□□ 2.85
TSPAN3-203ENST00000424443 MYL6BP14649 208 aa32.82■■■□□ 2.85
TSPAN3-203ENST00000424443 NBPF10Q6P3W6 841 aaKnown RBP32.82■■■□□ 2.85
TSPAN3-203ENST00000424443 NBPF15Q8N660 670 aa32.82■■■□□ 2.85
TSPAN3-203ENST00000424443 USP42Q9H9J4 1324 aaKnown RBP32.82■■■□□ 2.84
TSPAN3-203ENST00000424443 E9PSI1 815 aa32.82■■■□□ 2.84
TSPAN3-203ENST00000424443 POLD1P28340 1107 aa32.82■■■□□ 2.84
TSPAN3-203ENST00000424443 SRP68Q9UHB9 627 aaKnown RBP32.81■■■□□ 2.84
TSPAN3-203ENST00000424443 NARFQ9UHQ1 456 aa32.81■■■□□ 2.84
TSPAN3-203ENST00000424443 DZIP3Q86Y13 1208 aaKnown RBP32.79■■■□□ 2.84
TSPAN3-203ENST00000424443 NLGN1Q8N2Q7 840 aa32.79■■■□□ 2.84
TSPAN3-203ENST00000424443 TBC1D2BQ9UPU7 963 aa32.79■■■□□ 2.84
TSPAN3-203ENST00000424443 TWISTNBQ3B726 338 aaPredicted RBP32.78■■■□□ 2.84
TSPAN3-203ENST00000424443 USPL1Q5W0Q7 1092 aa32.78■■■□□ 2.84
TSPAN3-203ENST00000424443 GYS1P13807 737 aa32.77■■■□□ 2.84
TSPAN3-203ENST00000424443 TSPYL6Q8N831 410 aa32.77■■■□□ 2.84
TSPAN3-203ENST00000424443 PPP1R1BQ9UD71 204 aaPredicted RBP32.77■■■□□ 2.84
TSPAN3-203ENST00000424443 EXOSC9Q06265 439 aaKnown RBP32.77■■■□□ 2.84
TSPAN3-203ENST00000424443 DBF4Q9UBU7 674 aaPredicted RBP32.76■■■□□ 2.83
TSPAN3-203ENST00000424443 SLFN5Q08AF3 891 aa32.75■■■□□ 2.83
TSPAN3-203ENST00000424443 CCDC30Q5VVM6 783 aa32.75■■■□□ 2.83
TSPAN3-203ENST00000424443 DDX21Q9NR30 783 aaKnown RBP eCLIP32.75■■■□□ 2.83
TSPAN3-203ENST00000424443 CHPF2Q9P2E5 772 aa32.75■■■□□ 2.83
TSPAN3-203ENST00000424443 LRP5O75197 1615 aa32.74■■■□□ 2.83
TSPAN3-203ENST00000424443 PTGER2P43116 358 aa32.74■■■□□ 2.83
TSPAN3-203ENST00000424443 PDIA6Q15084 440 aa32.73■■■□□ 2.83
TSPAN3-203ENST00000424443 ANXA1P04083 346 aa32.72■■■□□ 2.83
TSPAN3-203ENST00000424443 KIF6Q6ZMV9 814 aa32.72■■■□□ 2.83
TSPAN3-203ENST00000424443 CDCA7LQ96GN5 454 aa32.72■■■□□ 2.83
TSPAN3-203ENST00000424443 FKBP8Q14318 412 aa32.71■■■□□ 2.83
TSPAN3-203ENST00000424443 PROSER3Q2NL68 480 aa32.71■■■□□ 2.83
TSPAN3-203ENST00000424443 SGIP1Q9BQI5 828 aa32.71■■■□□ 2.83
TSPAN3-203ENST00000424443 STK31Q9BXU1 1019 aa32.7■■■□□ 2.83
TSPAN3-203ENST00000424443 HYPKQ9NX55 129 aa32.7■■■□□ 2.83
TSPAN3-203ENST00000424443 ZNF652Q9Y2D9 606 aa32.7■■■□□ 2.83
TSPAN3-203ENST00000424443 CAMTA2O94983 1202 aa32.69■■■□□ 2.82
TSPAN3-203ENST00000424443 COL24A1Q17RW2 1714 aa32.68■■■□□ 2.82
TSPAN3-203ENST00000424443 MMP10P09238 476 aa32.68■■■□□ 2.82
TSPAN3-203ENST00000424443 AIMP1Q12904 312 aaKnown RBP32.68■■■□□ 2.82
TSPAN3-203ENST00000424443 TTLL7Q6ZT98 887 aa32.67■■■□□ 2.82
TSPAN3-203ENST00000424443 BCL2L12Q9HB09 334 aa32.67■■■□□ 2.82
TSPAN3-203ENST00000424443 PARP3Q9Y6F1 533 aa32.67■■■□□ 2.82
TSPAN3-203ENST00000424443 ZBED9Q6R2W3 1325 aa32.66■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 241.6 ms