RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 KCNQ3O43525 872 aa15.32■□□□□ 0.04
NCDN-204ENST00000423723 STARD3NLO95772 234 aa15.32■□□□□ 0.04
NCDN-204ENST00000423723 TM4SF1P30408 202 aa15.32■□□□□ 0.04
NCDN-204ENST00000423723 MCM10Q7L590 875 aa15.32■□□□□ 0.04
NCDN-204ENST00000423723 NLGN2Q8NFZ4 835 aa15.32■□□□□ 0.04
NCDN-204ENST00000423723 USP42Q9H9J4 1324 aaKnown RBP15.32■□□□□ 0.04
NCDN-204ENST00000423723 DCTN1Q14203 1278 aa15.31■□□□□ 0.04
NCDN-204ENST00000423723 NARFQ9UHQ1 456 aa15.31■□□□□ 0.04
NCDN-204ENST00000423723 ZBTB1Q9Y2K1 713 aa15.31■□□□□ 0.04
NCDN-204ENST00000423723 NEFMP07197 916 aa15.3■□□□□ 0.04
NCDN-204ENST00000423723 MMP10P09238 476 aa15.3■□□□□ 0.04
NCDN-204ENST00000423723 IL6STP40189 918 aaPredicted RBP15.29■□□□□ 0.04
NCDN-204ENST00000423723 BCL2L12Q9HB09 334 aa15.29■□□□□ 0.04
NCDN-204ENST00000423723 SNRPA1P09661 255 aaKnown RBP15.28■□□□□ 0.04
NCDN-204ENST00000423723 FKBP8Q14318 412 aa15.28■□□□□ 0.04
NCDN-204ENST00000423723 PNISRQ8TF01 805 aaKnown RBP15.28■□□□□ 0.04
NCDN-204ENST00000423723 BABAM1Q9NWV8 329 aa15.28■□□□□ 0.04
NCDN-204ENST00000423723 SRP68Q9UHB9 627 aaKnown RBP15.28■□□□□ 0.04
NCDN-204ENST00000423723 USP16Q9Y5T5 823 aa15.28■□□□□ 0.04
NCDN-204ENST00000423723 TMPOP42166 694 aaKnown RBP15.27■□□□□ 0.04
NCDN-204ENST00000423723 TGFB2P61812 414 aa15.27■□□□□ 0.04
NCDN-204ENST00000423723 C4AP0C0L4 1744 aa15.26■□□□□ 0.03
NCDN-204ENST00000423723 COL15A1P39059 1388 aa15.26■□□□□ 0.03
NCDN-204ENST00000423723 RGL2O15211 777 aa15.26■□□□□ 0.03
NCDN-204ENST00000423723 ADAMTS8Q9UP79 889 aa15.26■□□□□ 0.03
NCDN-204ENST00000423723 SUPT16HQ9Y5B9 1047 aaKnown RBP15.26■□□□□ 0.03
NCDN-204ENST00000423723 MAPK8IP3Q9UPT6 1336 aa15.25■□□□□ 0.03
NCDN-204ENST00000423723 KIF13BQ9NQT8 1826 aa15.25■□□□□ 0.03
NCDN-204ENST00000423723 A0A087WZG4 1122 aa15.25■□□□□ 0.03
NCDN-204ENST00000423723 POLRMTO00411 1230 aaKnown RBP15.25■□□□□ 0.03
NCDN-204ENST00000423723 GRIN3BO60391 1043 aa15.25■□□□□ 0.03
NCDN-204ENST00000423723 ZPR1O75312 459 aa15.25■□□□□ 0.03
NCDN-204ENST00000423723 A1BGP04217 495 aa15.25■□□□□ 0.03
NCDN-204ENST00000423723 YBX3P16989 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
NCDN-204ENST00000423723 DDR1Q08345 913 aa15.25■□□□□ 0.03
NCDN-204ENST00000423723 USPL1Q5W0Q7 1092 aa15.25■□□□□ 0.03
NCDN-204ENST00000423723 RUNDC1Q96C34 613 aa15.25■□□□□ 0.03
NCDN-204ENST00000423723 DLG5Q8TDM6 1919 aa15.25■□□□□ 0.03
NCDN-204ENST00000423723 C10orf71Q711Q0 1435 aa15.25■□□□□ 0.03
NCDN-204ENST00000423723 CANXP27824 592 aaKnown RBP15.24■□□□□ 0.03
NCDN-204ENST00000423723 RIPK4P57078 832 aa15.24■□□□□ 0.03
NCDN-204ENST00000423723 EIF4A1P60842 406 aaKnown RBP15.24■□□□□ 0.03
NCDN-204ENST00000423723 GPR162Q16538 588 aa15.24■□□□□ 0.03
NCDN-204ENST00000423723 PARP3Q9Y6F1 533 aa15.24■□□□□ 0.03
NCDN-204ENST00000423723 PRAMEF22A3QJZ6 481 aa15.23■□□□□ 0.03
NCDN-204ENST00000423723 GIGYF1O75420 1035 aaPredicted RBP15.23■□□□□ 0.03
NCDN-204ENST00000423723 MIS18AQ9NYP9 233 aa15.23■□□□□ 0.03
NCDN-204ENST00000423723 KCNA3P22001 575 aa15.22■□□□□ 0.03
NCDN-204ENST00000423723 YY1P25490 414 aa15.22■□□□□ 0.03
NCDN-204ENST00000423723 LMOD3Q0VAK6 560 aa15.22■□□□□ 0.03
NCDN-204ENST00000423723 NFIXQ14938 502 aa15.22■□□□□ 0.03
NCDN-204ENST00000423723 KLHL34Q8N239 644 aa15.22■□□□□ 0.03
NCDN-204ENST00000423723 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
NCDN-204ENST00000423723 NBPF26B4DH59 902 aa15.21■□□□□ 0.03
NCDN-204ENST00000423723 CAMTA2O94983 1202 aa15.21■□□□□ 0.03
NCDN-204ENST00000423723 NBPF10Q6P3W6 841 aaKnown RBP15.21■□□□□ 0.03
NCDN-204ENST00000423723 CLEC4GQ6UXB4 293 aa15.21■□□□□ 0.03
NCDN-204ENST00000423723 NBPF15Q8N660 670 aa15.21■□□□□ 0.03
NCDN-204ENST00000423723 THUMPD2Q9BTF0 503 aaKnown RBP15.21■□□□□ 0.03
NCDN-204ENST00000423723 PXDNLA1KZ92 1463 aa15.2■□□□□ 0.02
NCDN-204ENST00000423723 CHL1O00533 1208 aa15.2■□□□□ 0.02
NCDN-204ENST00000423723 WDR43Q15061 677 aaKnown RBP eCLIP15.2■□□□□ 0.02
NCDN-204ENST00000423723 KIAA1551Q9HCM1 1747 aa15.2■□□□□ 0.02
NCDN-204ENST00000423723 KDM3BQ7LBC6 1761 aa15.19■□□□□ 0.02
NCDN-204ENST00000423723 NRXN2Q9P2S2 1712 aa15.19■□□□□ 0.02
NCDN-204ENST00000423723 CHD4Q14839 1912 aa15.18■□□□□ 0.02
NCDN-204ENST00000423723 NCBP3Q53F19 620 aaKnown RBP15.18■□□□□ 0.02
NCDN-204ENST00000423723 TBC1D2BQ9UPU7 963 aa15.18■□□□□ 0.02
NCDN-204ENST00000423723 ERBB4Q15303 1308 aa15.17■□□□□ 0.02
NCDN-204ENST00000423723 A0A0G2JLW4 131 aa15.17■□□□□ 0.02
NCDN-204ENST00000423723 SERPINB2P05120 415 aa15.17■□□□□ 0.02
NCDN-204ENST00000423723 DPEP1P16444 411 aa15.17■□□□□ 0.02
NCDN-204ENST00000423723 CCDC184Q52MB2 194 aa15.17■□□□□ 0.02
NCDN-204ENST00000423723 TBC1D9BQ66K14 1250 aa15.17■□□□□ 0.02
NCDN-204ENST00000423723 LRP10Q7Z4F1 713 aa15.17■□□□□ 0.02
NCDN-204ENST00000423723 CCDC146Q8IYE0 955 aa15.17■□□□□ 0.02
NCDN-204ENST00000423723 ZNF853P0CG23 659 aa15.16■□□□□ 0.02
NCDN-204ENST00000423723 HNRNPUQ00839 825 aaKnown RBP eCLIP15.16■□□□□ 0.02
NCDN-204ENST00000423723 DZIP3Q86Y13 1208 aaKnown RBP15.16■□□□□ 0.02
NCDN-204ENST00000423723 MRS2Q9HD23 443 aa15.16■□□□□ 0.02
NCDN-204ENST00000423723 NEFLP07196 543 aa15.15■□□□□ 0.02
NCDN-204ENST00000423723 PDIA6Q15084 440 aa15.15■□□□□ 0.02
NCDN-204ENST00000423723 TSPYL4Q9UJ04 414 aa15.15■□□□□ 0.02
NCDN-204ENST00000423723 RRP7AQ9Y3A4 280 aaKnown RBP15.15■□□□□ 0.02
NCDN-204ENST00000423723 ERVV-1B6SEH8 477 aa15.14■□□□□ 0.01
NCDN-204ENST00000423723 CFAP44Q96MT7 982 aa15.14■□□□□ 0.01
NCDN-204ENST00000423723 PIM2Q9P1W9 311 aa15.14■□□□□ 0.01
NCDN-204ENST00000423723 PDZRN3Q9UPQ7 1066 aa15.14■□□□□ 0.01
NCDN-204ENST00000423723 APAF1O14727 1248 aa15.13■□□□□ 0.01
NCDN-204ENST00000423723 PIP4K2AP48426 406 aaPredicted RBP15.13■□□□□ 0.01
NCDN-204ENST00000423723 ZNF784Q8NCA9 323 aaPredicted RBP15.13■□□□□ 0.01
NCDN-204ENST00000423723 BRIP1Q9BX63 1249 aa15.13■□□□□ 0.01
NCDN-204ENST00000423723 AFDNP55196 1824 aaKnown RBP15.13■□□□□ 0.01
NCDN-204ENST00000423723 SCN7AQ01118 1682 aa15.12■□□□□ 0.01
NCDN-204ENST00000423723 CARMIL3Q8ND23 1372 aa15.12■□□□□ 0.01
NCDN-204ENST00000423723 BRCA1P38398 1863 aaKnown RBP15.12■□□□□ 0.01
NCDN-204ENST00000423723 KLRG2A4D1S0 409 aaPredicted RBP15.12■□□□□ 0.01
NCDN-204ENST00000423723 HOXB7P09629 217 aa15.12■□□□□ 0.01
NCDN-204ENST00000423723 CCDC27Q2M243 656 aa15.12■□□□□ 0.01
NCDN-204ENST00000423723 PRR5LQ6MZQ0 368 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms