RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 MBIPQ9NS73 344 aa28.26■■■□□ 2.11
SEC22C-207ENST00000423701 STARD3NLO95772 234 aa28.25■■■□□ 2.11
SEC22C-207ENST00000423701 SMIM5Q71RC9 77 aa28.25■■■□□ 2.11
SEC22C-207ENST00000423701 CCDC87Q9NVE4 849 aa28.25■■■□□ 2.11
SEC22C-207ENST00000423701 GIGYF1O75420 1035 aaPredicted RBP28.24■■■□□ 2.11
SEC22C-207ENST00000423701 PHF14O94880 888 aa28.24■■■□□ 2.11
SEC22C-207ENST00000423701 USP16Q9Y5T5 823 aa28.24■■■□□ 2.11
SEC22C-207ENST00000423701 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.23■■■□□ 2.11
SEC22C-207ENST00000423701 SSFA2P28290 1259 aa28.23■■■□□ 2.11
SEC22C-207ENST00000423701 RTCBQ9Y3I0 505 aaKnown RBP28.23■■■□□ 2.11
SEC22C-207ENST00000423701 IL16Q14005 1332 aa28.23■■■□□ 2.11
SEC22C-207ENST00000423701 RPS6KA4O75676 772 aa28.22■■■□□ 2.11
SEC22C-207ENST00000423701 COL23A1Q86Y22 540 aaPredicted RBP28.22■■■□□ 2.11
SEC22C-207ENST00000423701 WDR63Q8IWG1 891 aa28.22■■■□□ 2.11
SEC22C-207ENST00000423701 ZBTB1Q9Y2K1 713 aa28.22■■■□□ 2.11
SEC22C-207ENST00000423701 ZNF521Q96K83 1311 aa28.21■■■□□ 2.11
SEC22C-207ENST00000423701 FLAD1Q8NFF5 587 aa28.21■■■□□ 2.11
SEC22C-207ENST00000423701 C4AP0C0L4 1744 aa28.2■■■□□ 2.11
SEC22C-207ENST00000423701 KRT24Q2M2I5 525 aa28.2■■■□□ 2.1
SEC22C-207ENST00000423701 SOS1Q07889 1333 aaPredicted RBP28.19■■■□□ 2.1
SEC22C-207ENST00000423701 MSH5O43196 834 aa28.18■■■□□ 2.1
SEC22C-207ENST00000423701 A1BGP04217 495 aa28.18■■■□□ 2.1
SEC22C-207ENST00000423701 ADRA2BP18089 450 aa28.17■■■□□ 2.1
SEC22C-207ENST00000423701 CANXP27824 592 aaKnown RBP28.17■■■□□ 2.1
SEC22C-207ENST00000423701 TSR2Q969E8 191 aaKnown RBP28.17■■■□□ 2.1
SEC22C-207ENST00000423701 ZBTB7AO95365 584 aa28.16■■■□□ 2.1
SEC22C-207ENST00000423701 TRAPPC3LQ5T215 181 aa28.15■■■□□ 2.1
SEC22C-207ENST00000423701 COL15A1P39059 1388 aa28.15■■■□□ 2.1
SEC22C-207ENST00000423701 SLC16A10Q8TF71 515 aa28.15■■■□□ 2.1
SEC22C-207ENST00000423701 ARHGEF1Q92888 912 aaKnown RBP28.15■■■□□ 2.1
SEC22C-207ENST00000423701 SPINK5Q9NQ38 1064 aaPredicted RBP28.15■■■□□ 2.1
SEC22C-207ENST00000423701 PIP4K2AP48426 406 aaPredicted RBP28.14■■■□□ 2.09
SEC22C-207ENST00000423701 FANCIQ9NVI1 1328 aa28.13■■■□□ 2.09
SEC22C-207ENST00000423701 MTFR1LQ9H019 292 aa28.13■■■□□ 2.09
SEC22C-207ENST00000423701 LRP5O75197 1615 aa28.12■■■□□ 2.09
SEC22C-207ENST00000423701 IL6STP40189 918 aaPredicted RBP28.12■■■□□ 2.09
SEC22C-207ENST00000423701 EIF5P55010 431 aaKnown RBP28.12■■■□□ 2.09
SEC22C-207ENST00000423701 NBPF26B4DH59 902 aa28.11■■■□□ 2.09
SEC22C-207ENST00000423701 HOXB7P09629 217 aa28.11■■■□□ 2.09
SEC22C-207ENST00000423701 DUSP27Q5VZP5 1158 aa28.11■■■□□ 2.09
SEC22C-207ENST00000423701 NBPF10Q6P3W6 841 aaKnown RBP28.11■■■□□ 2.09
SEC22C-207ENST00000423701 NBPF15Q8N660 670 aa28.11■■■□□ 2.09
SEC22C-207ENST00000423701 COL24A1Q17RW2 1714 aa28.11■■■□□ 2.09
SEC22C-207ENST00000423701 EIF2S2P20042 333 aaKnown RBP28.1■■■□□ 2.09
SEC22C-207ENST00000423701 RFC4P35249 363 aa28.1■■■□□ 2.09
SEC22C-207ENST00000423701 C8orf58Q8NAV2 365 aa28.09■■■□□ 2.09
SEC22C-207ENST00000423701 SPON1Q9HCB6 807 aa28.09■■■□□ 2.09
SEC22C-207ENST00000423701 ATF5Q9Y2D1 282 aaPredicted RBP28.09■■■□□ 2.09
SEC22C-207ENST00000423701 ZNF330Q9Y3S2 320 aaPredicted RBP28.09■■■□□ 2.09
SEC22C-207ENST00000423701 ERBB4Q15303 1308 aa28.08■■■□□ 2.09
SEC22C-207ENST00000423701 USP42Q9H9J4 1324 aaKnown RBP28.08■■■□□ 2.09
SEC22C-207ENST00000423701 HNRNPUQ00839 825 aaKnown RBP eCLIP28.08■■■□□ 2.09
SEC22C-207ENST00000423701 GOLGA2Q08379 1002 aa28.08■■■□□ 2.09
SEC22C-207ENST00000423701 MSL1Q68DK7 614 aa28.08■■■□□ 2.09
SEC22C-207ENST00000423701 MYH16Q9H6N6 1097 aa28.08■■■□□ 2.09
SEC22C-207ENST00000423701 ELL2O00472 640 aaPredicted RBP28.07■■■□□ 2.08
SEC22C-207ENST00000423701 SRCAPQ6ZRS2 3230 aa28.07■■■□□ 2.08
SEC22C-207ENST00000423701 NECTIN2Q92692 538 aa28.07■■■□□ 2.08
SEC22C-207ENST00000423701 SRP68Q9UHB9 627 aaKnown RBP28.07■■■□□ 2.08
SEC22C-207ENST00000423701 SCN7AQ01118 1682 aa28.06■■■□□ 2.08
SEC22C-207ENST00000423701 HDGFL1Q5TGJ6 251 aa28.06■■■□□ 2.08
SEC22C-207ENST00000423701 TSPYL6Q8N831 410 aa28.06■■■□□ 2.08
SEC22C-207ENST00000423701 A0A087WZG4 1122 aa28.04■■■□□ 2.08
SEC22C-207ENST00000423701 PTGER2P43116 358 aa28.04■■■□□ 2.08
SEC22C-207ENST00000423701 NARFQ9UHQ1 456 aa28.04■■■□□ 2.08
SEC22C-207ENST00000423701 GYS1P13807 737 aa28.03■■■□□ 2.08
SEC22C-207ENST00000423701 MYL6BP14649 208 aa28.03■■■□□ 2.08
SEC22C-207ENST00000423701 PDIA6Q15084 440 aa28.03■■■□□ 2.08
SEC22C-207ENST00000423701 NPM2Q86SE8 214 aaKnown RBP28.03■■■□□ 2.08
SEC22C-207ENST00000423701 SGIP1Q9BQI5 828 aa28.03■■■□□ 2.08
SEC22C-207ENST00000423701 BCORQ6W2J9 1755 aa28.03■■■□□ 2.08
SEC22C-207ENST00000423701 E9PSI1 815 aa28.02■■■□□ 2.08
SEC22C-207ENST00000423701 ZPR1O75312 459 aa28.02■■■□□ 2.08
SEC22C-207ENST00000423701 USPL1Q5W0Q7 1092 aa28.02■■■□□ 2.08
SEC22C-207ENST00000423701 PROSER3Q2NL68 480 aa28.02■■■□□ 2.08
SEC22C-207ENST00000423701 CDCA7LQ96GN5 454 aa28.02■■■□□ 2.08
SEC22C-207ENST00000423701 TBC1D2BQ9UPU7 963 aa28.02■■■□□ 2.08
SEC22C-207ENST00000423701 EXOSC9Q06265 439 aaKnown RBP28.01■■■□□ 2.07
SEC22C-207ENST00000423701 SLFN5Q08AF3 891 aa28.01■■■□□ 2.07
SEC22C-207ENST00000423701 TWISTNBQ3B726 338 aaPredicted RBP28.01■■■□□ 2.07
SEC22C-207ENST00000423701 LRP10Q7Z4F1 713 aa28.01■■■□□ 2.07
SEC22C-207ENST00000423701 DZIP3Q86Y13 1208 aaKnown RBP28.01■■■□□ 2.07
SEC22C-207ENST00000423701 CHPF2Q9P2E5 772 aa28.01■■■□□ 2.07
SEC22C-207ENST00000423701 ANXA1P04083 346 aa28■■■□□ 2.07
SEC22C-207ENST00000423701 ARXQ96QS3 562 aa27.99■■■□□ 2.07
SEC22C-207ENST00000423701 DDX21Q9NR30 783 aaKnown RBP eCLIP27.99■■■□□ 2.07
SEC22C-207ENST00000423701 FKBP8Q14318 412 aa27.98■■■□□ 2.07
SEC22C-207ENST00000423701 NLGN1Q8N2Q7 840 aa27.98■■■□□ 2.07
SEC22C-207ENST00000423701 BCL2L12Q9HB09 334 aa27.98■■■□□ 2.07
SEC22C-207ENST00000423701 CAMTA2O94983 1202 aa27.97■■■□□ 2.07
SEC22C-207ENST00000423701 POLD1P28340 1107 aa27.97■■■□□ 2.07
SEC22C-207ENST00000423701 DBF4Q9UBU7 674 aaPredicted RBP27.97■■■□□ 2.07
SEC22C-207ENST00000423701 CCDC30Q5VVM6 783 aa27.95■■■□□ 2.06
SEC22C-207ENST00000423701 TTLL7Q6ZT98 887 aa27.95■■■□□ 2.06
SEC22C-207ENST00000423701 TRMT2AQ8IZ69 625 aaKnown RBP27.95■■■□□ 2.06
SEC22C-207ENST00000423701 ZBED9Q6R2W3 1325 aa27.94■■■□□ 2.06
SEC22C-207ENST00000423701 VAMP4O75379 141 aa27.94■■■□□ 2.06
SEC22C-207ENST00000423701 MMP10P09238 476 aa27.94■■■□□ 2.06
SEC22C-207ENST00000423701 CHMP4AQ9BY43 222 aa27.94■■■□□ 2.06
SEC22C-207ENST00000423701 MAP3K15Q6ZN16 1313 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms