RNA–Protein interactions for RNA: ENST00000422877.1

SEC23B-205, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 3

Gene SEC23B, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-205ENST00000422877 PHF14O94880 888 aa18.15■□□□□ 0.5
SEC23B-205ENST00000422877 SNRPA1P09661 255 aaKnown RBP18.15■□□□□ 0.5
SEC23B-205ENST00000422877 TRAPPC3LQ5T215 181 aa18.15■□□□□ 0.5
SEC23B-205ENST00000422877 KIF13BQ9NQT8 1826 aa18.14■□□□□ 0.5
SEC23B-205ENST00000422877 CCER2I3L3R5 266 aa18.14■□□□□ 0.49
SEC23B-205ENST00000422877 MSH5O43196 834 aa18.14■□□□□ 0.49
SEC23B-205ENST00000422877 ATF5Q9Y2D1 282 aaPredicted RBP18.14■□□□□ 0.49
SEC23B-205ENST00000422877 SOS1Q07889 1333 aaPredicted RBP18.14■□□□□ 0.49
SEC23B-205ENST00000422877 CALD1Q05682 793 aaKnown RBP18.13■□□□□ 0.49
SEC23B-205ENST00000422877 CCDC27Q2M243 656 aa18.13■□□□□ 0.49
SEC23B-205ENST00000422877 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
SEC23B-205ENST00000422877 POLD1P28340 1107 aa18.12■□□□□ 0.49
SEC23B-205ENST00000422877 EIF4A1P60842 406 aaKnown RBP18.12■□□□□ 0.49
SEC23B-205ENST00000422877 ARHGEF1Q92888 912 aaKnown RBP18.12■□□□□ 0.49
SEC23B-205ENST00000422877 MIS18AQ9NYP9 233 aa18.12■□□□□ 0.49
SEC23B-205ENST00000422877 ZBTB1Q9Y2K1 713 aa18.12■□□□□ 0.49
SEC23B-205ENST00000422877 COL15A1P39059 1388 aa18.12■□□□□ 0.49
SEC23B-205ENST00000422877 CACNA1FO60840 1977 aa18.11■□□□□ 0.49
SEC23B-205ENST00000422877 PPP1R1BQ9UD71 204 aaPredicted RBP18.11■□□□□ 0.49
SEC23B-205ENST00000422877 AFDNP55196 1824 aaKnown RBP18.11■□□□□ 0.49
SEC23B-205ENST00000422877 CHL1O00533 1208 aa18.1■□□□□ 0.49
SEC23B-205ENST00000422877 RFC4P35249 363 aa18.1■□□□□ 0.49
SEC23B-205ENST00000422877 IL6STP40189 918 aaPredicted RBP18.1■□□□□ 0.49
SEC23B-205ENST00000422877 DIEXFQ68CQ4 756 aaKnown RBP18.1■□□□□ 0.49
SEC23B-205ENST00000422877 NGEFQ8N5V2 710 aa18.1■□□□□ 0.49
SEC23B-205ENST00000422877 CFAP44Q96MT7 982 aa18.1■□□□□ 0.49
SEC23B-205ENST00000422877 NUP98P52948 1817 aa18.09■□□□□ 0.49
SEC23B-205ENST00000422877 USP42Q9H9J4 1324 aaKnown RBP18.09■□□□□ 0.49
SEC23B-205ENST00000422877 GIGYF1O75420 1035 aaPredicted RBP18.09■□□□□ 0.49
SEC23B-205ENST00000422877 EIF5P55010 431 aaKnown RBP18.09■□□□□ 0.49
SEC23B-205ENST00000422877 SMIM5Q71RC9 77 aa18.09■□□□□ 0.49
SEC23B-205ENST00000422877 USP16Q9Y5T5 823 aa18.09■□□□□ 0.49
SEC23B-205ENST00000422877 NRXN2Q9P2S2 1712 aa18.09■□□□□ 0.49
SEC23B-205ENST00000422877 FAM9BQ8IZU0 186 aa18.08■□□□□ 0.48
SEC23B-205ENST00000422877 NLGN1Q8N2Q7 840 aa18.08■□□□□ 0.48
SEC23B-205ENST00000422877 ARXQ96QS3 562 aa18.08■□□□□ 0.48
SEC23B-205ENST00000422877 IFT57Q9NWB7 429 aa18.08■□□□□ 0.48
SEC23B-205ENST00000422877 A0A087WZG4 1122 aa18.07■□□□□ 0.48
SEC23B-205ENST00000422877 ZNF853P0CG23 659 aa18.07■□□□□ 0.48
SEC23B-205ENST00000422877 GYS1P13807 737 aa18.07■□□□□ 0.48
SEC23B-205ENST00000422877 CANXP27824 592 aaKnown RBP18.07■□□□□ 0.48
SEC23B-205ENST00000422877 ERBB4Q15303 1308 aa18.06■□□□□ 0.48
SEC23B-205ENST00000422877 PRAMEF22A3QJZ6 481 aa18.06■□□□□ 0.48
SEC23B-205ENST00000422877 GNAI1P63096 354 aa18.06■□□□□ 0.48
SEC23B-205ENST00000422877 NARFQ9UHQ1 456 aa18.06■□□□□ 0.48
SEC23B-205ENST00000422877 A1BGP04217 495 aa18.05■□□□□ 0.48
SEC23B-205ENST00000422877 MSL1Q68DK7 614 aa18.05■□□□□ 0.48
SEC23B-205ENST00000422877 WWC1Q8IX03 1113 aa18.05■□□□□ 0.48
SEC23B-205ENST00000422877 ANKRD36CQ5JPF3 1778 aa18.04■□□□□ 0.48
SEC23B-205ENST00000422877 IL16Q14005 1332 aa18.04■□□□□ 0.48
SEC23B-205ENST00000422877 ZPR1O75312 459 aa18.04■□□□□ 0.48
SEC23B-205ENST00000422877 HOXB7P09629 217 aa18.04■□□□□ 0.48
SEC23B-205ENST00000422877 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
SEC23B-205ENST00000422877 KIAA1551Q9HCM1 1747 aa18.03■□□□□ 0.48
SEC23B-205ENST00000422877 BRCA1P38398 1863 aaKnown RBP18.03■□□□□ 0.48
SEC23B-205ENST00000422877 LAS1LQ9Y4W2 734 aaKnown RBP18.03■□□□□ 0.48
SEC23B-205ENST00000422877 RGL2O15211 777 aa18.02■□□□□ 0.48
SEC23B-205ENST00000422877 MBIPQ9NS73 344 aa18.02■□□□□ 0.48
SEC23B-205ENST00000422877 SRP68Q9UHB9 627 aaKnown RBP18.02■□□□□ 0.48
SEC23B-205ENST00000422877 NBPF26B4DH59 902 aa18.01■□□□□ 0.47
SEC23B-205ENST00000422877 USPL1Q5W0Q7 1092 aa18.01■□□□□ 0.47
SEC23B-205ENST00000422877 NBPF10Q6P3W6 841 aaKnown RBP18.01■□□□□ 0.47
SEC23B-205ENST00000422877 WDR63Q8IWG1 891 aa18.01■□□□□ 0.47
SEC23B-205ENST00000422877 NBPF15Q8N660 670 aa18.01■□□□□ 0.47
SEC23B-205ENST00000422877 FHDC1Q9C0D6 1143 aaPredicted RBP18.01■□□□□ 0.47
SEC23B-205ENST00000422877 DLEC1Q9Y238 1755 aa18■□□□□ 0.47
SEC23B-205ENST00000422877 MMP10P09238 476 aa18■□□□□ 0.47
SEC23B-205ENST00000422877 SYT17Q9BSW7 474 aa18■□□□□ 0.47
SEC23B-205ENST00000422877 N4BP2Q86UW6 1770 aaPredicted RBP17.99■□□□□ 0.47
SEC23B-205ENST00000422877 FKBP8Q14318 412 aa17.99■□□□□ 0.47
SEC23B-205ENST00000422877 BCL2L12Q9HB09 334 aa17.99■□□□□ 0.47
SEC23B-205ENST00000422877 ZNF330Q9Y3S2 320 aaPredicted RBP17.99■□□□□ 0.47
SEC23B-205ENST00000422877 CD2APQ9Y5K6 639 aa17.99■□□□□ 0.47
SEC23B-205ENST00000422877 CHD4Q14839 1912 aa17.99■□□□□ 0.47
SEC23B-205ENST00000422877 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
SEC23B-205ENST00000422877 DZIP3Q86Y13 1208 aaKnown RBP17.98■□□□□ 0.47
SEC23B-205ENST00000422877 PARP3Q9Y6F1 533 aa17.98■□□□□ 0.47
SEC23B-205ENST00000422877 ANKRD31Q8N7Z5 1873 aa17.98■□□□□ 0.47
SEC23B-205ENST00000422877 CAMTA2O94983 1202 aa17.97■□□□□ 0.47
SEC23B-205ENST00000422877 TM4SF1P30408 202 aa17.97■□□□□ 0.47
SEC23B-205ENST00000422877 PIP4K2AP48426 406 aaPredicted RBP17.97■□□□□ 0.47
SEC23B-205ENST00000422877 CLEC4GQ6UXB4 293 aa17.97■□□□□ 0.47
SEC23B-205ENST00000422877 CHMP4AQ9BY43 222 aa17.97■□□□□ 0.47
SEC23B-205ENST00000422877 TBC1D2BQ9UPU7 963 aa17.97■□□□□ 0.47
SEC23B-205ENST00000422877 ARFGEF2Q9Y6D5 1785 aa17.96■□□□□ 0.47
SEC23B-205ENST00000422877 KRT24Q2M2I5 525 aa17.96■□□□□ 0.47
SEC23B-205ENST00000422877 MIER1Q8N108 512 aa17.96■□□□□ 0.47
SEC23B-205ENST00000422877 ZNF652Q9Y2D9 606 aa17.96■□□□□ 0.47
SEC23B-205ENST00000422877 GOLGB1Q14789 3259 aaKnown RBP17.96■□□□□ 0.47
SEC23B-205ENST00000422877 ZNF521Q96K83 1311 aa17.96■□□□□ 0.46
SEC23B-205ENST00000422877 ARFGEF1Q9Y6D6 1849 aa17.95■□□□□ 0.46
SEC23B-205ENST00000422877 POLRMTO00411 1230 aaKnown RBP17.95■□□□□ 0.46
SEC23B-205ENST00000422877 EIF2S2P20042 333 aaKnown RBP17.95■□□□□ 0.46
SEC23B-205ENST00000422877 PDIA6Q15084 440 aa17.95■□□□□ 0.46
SEC23B-205ENST00000422877 DUSP27Q5VZP5 1158 aa17.95■□□□□ 0.46
SEC23B-205ENST00000422877 LRP10Q7Z4F1 713 aa17.95■□□□□ 0.46
SEC23B-205ENST00000422877 CARMIL3Q8ND23 1372 aa17.94■□□□□ 0.46
SEC23B-205ENST00000422877 DDR1Q08345 913 aa17.94■□□□□ 0.46
SEC23B-205ENST00000422877 NFIXQ14938 502 aa17.94■□□□□ 0.46
SEC23B-205ENST00000422877 HDGFL1Q5TGJ6 251 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms