RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 STARD3NLO95772 234 aa12.69□□□□□ -0.38
HERC3-204ENST00000422770 CANXP27824 592 aaKnown RBP12.69□□□□□ -0.38
HERC3-204ENST00000422770 PTGER2P43116 358 aa12.69□□□□□ -0.38
HERC3-204ENST00000422770 RC3H1Q5TC82 1133 aaKnown RBP12.69□□□□□ -0.38
HERC3-204ENST00000422770 ARXQ96QS3 562 aa12.69□□□□□ -0.38
HERC3-204ENST00000422770 CCER2I3L3R5 266 aa12.68□□□□□ -0.38
HERC3-204ENST00000422770 CYP19A1P11511 503 aaPredicted RBP12.68□□□□□ -0.38
HERC3-204ENST00000422770 NPM2Q86SE8 214 aaKnown RBP12.68□□□□□ -0.38
HERC3-204ENST00000422770 VSIG10Q8N0Z9 540 aa12.68□□□□□ -0.38
HERC3-204ENST00000422770 APAF1O14727 1248 aa12.67□□□□□ -0.38
HERC3-204ENST00000422770 PNISRQ8TF01 805 aaKnown RBP12.67□□□□□ -0.38
HERC3-204ENST00000422770 ARHGEF1Q92888 912 aaKnown RBP12.67□□□□□ -0.38
HERC3-204ENST00000422770 FHDC1Q9C0D6 1143 aaPredicted RBP12.67□□□□□ -0.38
HERC3-204ENST00000422770 TSPYL4Q9UJ04 414 aa12.67□□□□□ -0.38
HERC3-204ENST00000422770 ZBTB1Q9Y2K1 713 aa12.67□□□□□ -0.38
HERC3-204ENST00000422770 COL15A1P39059 1388 aa12.67□□□□□ -0.38
HERC3-204ENST00000422770 ADRA2BP18089 450 aa12.66□□□□□ -0.38
HERC3-204ENST00000422770 INTS5Q6P9B9 1019 aaKnown RBP12.66□□□□□ -0.38
HERC3-204ENST00000422770 FAM9BQ8IZU0 186 aa12.66□□□□□ -0.38
HERC3-204ENST00000422770 TEX13AQ9BXU3 409 aaPredicted RBP12.66□□□□□ -0.38
HERC3-204ENST00000422770 PRAMEF22A3QJZ6 481 aa12.65□□□□□ -0.38
HERC3-204ENST00000422770 DCAF8L1A6NGE4 600 aa12.65□□□□□ -0.38
HERC3-204ENST00000422770 ZPR1O75312 459 aa12.65□□□□□ -0.38
HERC3-204ENST00000422770 SNRPA1P09661 255 aaKnown RBP12.65□□□□□ -0.38
HERC3-204ENST00000422770 PIP4K2AP48426 406 aaPredicted RBP12.65□□□□□ -0.38
HERC3-204ENST00000422770 SGIP1Q9BQI5 828 aa12.65□□□□□ -0.38
HERC3-204ENST00000422770 SRP68Q9UHB9 627 aaKnown RBP12.65□□□□□ -0.38
HERC3-204ENST00000422770 SOS1Q07889 1333 aaPredicted RBP12.64□□□□□ -0.39
HERC3-204ENST00000422770 A1BGP04217 495 aa12.64□□□□□ -0.39
HERC3-204ENST00000422770 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
HERC3-204ENST00000422770 SCN7AQ01118 1682 aa12.64□□□□□ -0.39
HERC3-204ENST00000422770 MMP10P09238 476 aa12.63□□□□□ -0.39
HERC3-204ENST00000422770 SALL2Q9Y467 1007 aaPredicted RBP12.63□□□□□ -0.39
HERC3-204ENST00000422770 USP16Q9Y5T5 823 aa12.63□□□□□ -0.39
HERC3-204ENST00000422770 BCORQ6W2J9 1755 aa12.63□□□□□ -0.39
HERC3-204ENST00000422770 USPL1Q5W0Q7 1092 aa12.62□□□□□ -0.39
HERC3-204ENST00000422770 NLGN1Q8N2Q7 840 aa12.62□□□□□ -0.39
HERC3-204ENST00000422770 SYT17Q9BSW7 474 aa12.62□□□□□ -0.39
HERC3-204ENST00000422770 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
HERC3-204ENST00000422770 PARP3Q9Y6F1 533 aa12.62□□□□□ -0.39
HERC3-204ENST00000422770 USP42Q9H9J4 1324 aaKnown RBP12.62□□□□□ -0.39
HERC3-204ENST00000422770 AFDNP55196 1824 aaKnown RBP12.61□□□□□ -0.39
HERC3-204ENST00000422770 A0A087WZG4 1122 aa12.61□□□□□ -0.39
HERC3-204ENST00000422770 GYS1P13807 737 aa12.61□□□□□ -0.39
HERC3-204ENST00000422770 EIF4A1P60842 406 aaKnown RBP12.61□□□□□ -0.39
HERC3-204ENST00000422770 NGEFQ8N5V2 710 aa12.61□□□□□ -0.39
HERC3-204ENST00000422770 TBC1D2BQ9UPU7 963 aa12.61□□□□□ -0.39
HERC3-204ENST00000422770 N4BP2Q86UW6 1770 aaPredicted RBP12.61□□□□□ -0.39
HERC3-204ENST00000422770 EIF2S2P20042 333 aaKnown RBP12.6□□□□□ -0.39
HERC3-204ENST00000422770 CALD1Q05682 793 aaKnown RBP12.6□□□□□ -0.39
HERC3-204ENST00000422770 FKBP8Q14318 412 aa12.6□□□□□ -0.39
HERC3-204ENST00000422770 BICDL1Q6ZP65 573 aa12.6□□□□□ -0.39
HERC3-204ENST00000422770 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
HERC3-204ENST00000422770 YTHDC1Q96MU7 727 aaKnown RBP12.6□□□□□ -0.39
HERC3-204ENST00000422770 NPHP1O15259 732 aa12.59□□□□□ -0.39
HERC3-204ENST00000422770 MYL6BP14649 208 aa12.59□□□□□ -0.39
HERC3-204ENST00000422770 IL6STP40189 918 aaPredicted RBP12.59□□□□□ -0.39
HERC3-204ENST00000422770 DZIP3Q86Y13 1208 aaKnown RBP12.59□□□□□ -0.39
HERC3-204ENST00000422770 NLGN2Q8NFZ4 835 aa12.59□□□□□ -0.39
HERC3-204ENST00000422770 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
HERC3-204ENST00000422770 WWC3Q9ULE0 1092 aa12.59□□□□□ -0.39
HERC3-204ENST00000422770 GIGYF1O75420 1035 aaPredicted RBP12.58□□□□□ -0.4
HERC3-204ENST00000422770 EIF5P55010 431 aaKnown RBP12.58□□□□□ -0.4
HERC3-204ENST00000422770 KIF13BQ9NQT8 1826 aa12.58□□□□□ -0.4
HERC3-204ENST00000422770 GNAI1P63096 354 aa12.57□□□□□ -0.4
HERC3-204ENST00000422770 GPR162Q16538 588 aa12.57□□□□□ -0.4
HERC3-204ENST00000422770 KRT24Q2M2I5 525 aa12.57□□□□□ -0.4
HERC3-204ENST00000422770 BABAM1Q9NWV8 329 aa12.57□□□□□ -0.4
HERC3-204ENST00000422770 NUP98P52948 1817 aa12.57□□□□□ -0.4
HERC3-204ENST00000422770 CHL1O00533 1208 aa12.56□□□□□ -0.4
HERC3-204ENST00000422770 CFAP44Q96MT7 982 aa12.56□□□□□ -0.4
HERC3-204ENST00000422770 MBIPQ9NS73 344 aa12.56□□□□□ -0.4
HERC3-204ENST00000422770 CACNA1SQ13698 1873 aa12.55□□□□□ -0.4
HERC3-204ENST00000422770 NBPF26B4DH59 902 aa12.55□□□□□ -0.4
HERC3-204ENST00000422770 DDR1Q08345 913 aa12.55□□□□□ -0.4
HERC3-204ENST00000422770 NFIXQ14938 502 aa12.55□□□□□ -0.4
HERC3-204ENST00000422770 NBPF10Q6P3W6 841 aaKnown RBP12.55□□□□□ -0.4
HERC3-204ENST00000422770 KIF6Q6ZMV9 814 aa12.55□□□□□ -0.4
HERC3-204ENST00000422770 NBPF15Q8N660 670 aa12.55□□□□□ -0.4
HERC3-204ENST00000422770 IFT57Q9NWB7 429 aa12.55□□□□□ -0.4
HERC3-204ENST00000422770 ZNF652Q9Y2D9 606 aa12.55□□□□□ -0.4
HERC3-204ENST00000422770 CD2APQ9Y5K6 639 aa12.55□□□□□ -0.4
HERC3-204ENST00000422770 ELL2O00472 640 aaPredicted RBP12.54□□□□□ -0.4
HERC3-204ENST00000422770 ANXA1P04083 346 aa12.54□□□□□ -0.4
HERC3-204ENST00000422770 TBC1D9BQ66K14 1250 aa12.54□□□□□ -0.4
HERC3-204ENST00000422770 BCL2L12Q9HB09 334 aa12.54□□□□□ -0.4
HERC3-204ENST00000422770 CHD4Q14839 1912 aa12.54□□□□□ -0.4
HERC3-204ENST00000422770 KIAA1551Q9HCM1 1747 aa12.54□□□□□ -0.4
HERC3-204ENST00000422770 C10orf71Q711Q0 1435 aa12.54□□□□□ -0.4
HERC3-204ENST00000422770 ANKRD36CQ5JPF3 1778 aa12.53□□□□□ -0.4
HERC3-204ENST00000422770 FAM177BA6PVY3 158 aa12.53□□□□□ -0.4
HERC3-204ENST00000422770 POLRMTO00411 1230 aaKnown RBP12.53□□□□□ -0.4
HERC3-204ENST00000422770 CAMTA2O94983 1202 aa12.53□□□□□ -0.4
HERC3-204ENST00000422770 SERPINB2P05120 415 aa12.53□□□□□ -0.4
HERC3-204ENST00000422770 YY1P25490 414 aa12.53□□□□□ -0.4
HERC3-204ENST00000422770 HDGFL1Q5TGJ6 251 aa12.53□□□□□ -0.4
HERC3-204ENST00000422770 DUSP27Q5VZP5 1158 aa12.53□□□□□ -0.4
HERC3-204ENST00000422770 WWC1Q8IX03 1113 aa12.53□□□□□ -0.4
HERC3-204ENST00000422770 TSR2Q969E8 191 aaKnown RBP12.53□□□□□ -0.4
HERC3-204ENST00000422770 ZBTB3Q9H5J0 574 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms