RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 WWC1Q8IX03 1113 aa25.28■■□□□ 1.64
GCDH-202ENST00000421816 SLC16A10Q8TF71 515 aa25.28■■□□□ 1.64
GCDH-202ENST00000421816 CFAP44Q96MT7 982 aa25.28■■□□□ 1.64
GCDH-202ENST00000421816 RTCBQ9Y3I0 505 aaKnown RBP25.28■■□□□ 1.64
GCDH-202ENST00000421816 COL24A1Q17RW2 1714 aa25.28■■□□□ 1.64
GCDH-202ENST00000421816 PRAMEF22A3QJZ6 481 aa25.27■■□□□ 1.64
GCDH-202ENST00000421816 SMIM5Q71RC9 77 aa25.27■■□□□ 1.64
GCDH-202ENST00000421816 NGEFQ8N5V2 710 aa25.27■■□□□ 1.64
GCDH-202ENST00000421816 IFT57Q9NWB7 429 aa25.26■■□□□ 1.63
GCDH-202ENST00000421816 USP16Q9Y5T5 823 aa25.26■■□□□ 1.63
GCDH-202ENST00000421816 C4AP0C0L4 1744 aa25.26■■□□□ 1.63
GCDH-202ENST00000421816 GIGYF1O75420 1035 aaPredicted RBP25.25■■□□□ 1.63
GCDH-202ENST00000421816 PHF14O94880 888 aa25.25■■□□□ 1.63
GCDH-202ENST00000421816 ADRA2BP18089 450 aa25.25■■□□□ 1.63
GCDH-202ENST00000421816 MTFR1LQ9H019 292 aa25.25■■□□□ 1.63
GCDH-202ENST00000421816 LAS1LQ9Y4W2 734 aaKnown RBP25.25■■□□□ 1.63
GCDH-202ENST00000421816 ZBTB7AO95365 584 aa25.24■■□□□ 1.63
GCDH-202ENST00000421816 GNAI1P63096 354 aa25.24■■□□□ 1.63
GCDH-202ENST00000421816 ZBTB1Q9Y2K1 713 aa25.24■■□□□ 1.63
GCDH-202ENST00000421816 SOS1Q07889 1333 aaPredicted RBP25.23■■□□□ 1.63
GCDH-202ENST00000421816 TRAPPC3LQ5T215 181 aa25.23■■□□□ 1.63
GCDH-202ENST00000421816 IL16Q14005 1332 aa25.22■■□□□ 1.63
GCDH-202ENST00000421816 MSH5O43196 834 aa25.22■■□□□ 1.63
GCDH-202ENST00000421816 ARHGEF1Q92888 912 aaKnown RBP25.22■■□□□ 1.63
GCDH-202ENST00000421816 SPON1Q9HCB6 807 aa25.22■■□□□ 1.63
GCDH-202ENST00000421816 MBIPQ9NS73 344 aa25.22■■□□□ 1.63
GCDH-202ENST00000421816 SALL2Q9Y467 1007 aaPredicted RBP25.22■■□□□ 1.63
GCDH-202ENST00000421816 A1BGP04217 495 aa25.2■■□□□ 1.62
GCDH-202ENST00000421816 WDR63Q8IWG1 891 aa25.2■■□□□ 1.62
GCDH-202ENST00000421816 ATF5Q9Y2D1 282 aaPredicted RBP25.2■■□□□ 1.62
GCDH-202ENST00000421816 CANXP27824 592 aaKnown RBP25.19■■□□□ 1.62
GCDH-202ENST00000421816 SGIP1Q9BQI5 828 aa25.19■■□□□ 1.62
GCDH-202ENST00000421816 PTGER2P43116 358 aa25.18■■□□□ 1.62
GCDH-202ENST00000421816 EIF5P55010 431 aaKnown RBP25.18■■□□□ 1.62
GCDH-202ENST00000421816 COL15A1P39059 1388 aa25.18■■□□□ 1.62
GCDH-202ENST00000421816 IL6STP40189 918 aaPredicted RBP25.17■■□□□ 1.62
GCDH-202ENST00000421816 ZNF521Q96K83 1311 aa25.16■■□□□ 1.62
GCDH-202ENST00000421816 RFC4P35249 363 aa25.16■■□□□ 1.62
GCDH-202ENST00000421816 KRT24Q2M2I5 525 aa25.16■■□□□ 1.62
GCDH-202ENST00000421816 NBPF26B4DH59 902 aa25.15■■□□□ 1.62
GCDH-202ENST00000421816 NBPF10Q6P3W6 841 aaKnown RBP25.15■■□□□ 1.62
GCDH-202ENST00000421816 NBPF15Q8N660 670 aa25.15■■□□□ 1.62
GCDH-202ENST00000421816 USP42Q9H9J4 1324 aaKnown RBP25.14■■□□□ 1.62
GCDH-202ENST00000421816 HOXB7P09629 217 aa25.13■■□□□ 1.61
GCDH-202ENST00000421816 ERBB4Q15303 1308 aa25.12■■□□□ 1.61
GCDH-202ENST00000421816 A0A087WZG4 1122 aa25.12■■□□□ 1.61
GCDH-202ENST00000421816 GYS1P13807 737 aa25.12■■□□□ 1.61
GCDH-202ENST00000421816 PIP4K2AP48426 406 aaPredicted RBP25.12■■□□□ 1.61
GCDH-202ENST00000421816 MSL1Q68DK7 614 aa25.12■■□□□ 1.61
GCDH-202ENST00000421816 TSR2Q969E8 191 aaKnown RBP25.12■■□□□ 1.61
GCDH-202ENST00000421816 SRP68Q9UHB9 627 aaKnown RBP25.12■■□□□ 1.61
GCDH-202ENST00000421816 NARFQ9UHQ1 456 aa25.11■■□□□ 1.61
GCDH-202ENST00000421816 SCN7AQ01118 1682 aa25.1■■□□□ 1.61
GCDH-202ENST00000421816 DUSP27Q5VZP5 1158 aa25.1■■□□□ 1.61
GCDH-202ENST00000421816 BCORQ6W2J9 1755 aa25.09■■□□□ 1.61
GCDH-202ENST00000421816 EIF2S2P20042 333 aaKnown RBP25.09■■□□□ 1.61
GCDH-202ENST00000421816 POLD1P28340 1107 aa25.09■■□□□ 1.61
GCDH-202ENST00000421816 NLGN1Q8N2Q7 840 aa25.09■■□□□ 1.61
GCDH-202ENST00000421816 SPINK5Q9NQ38 1064 aaPredicted RBP25.09■■□□□ 1.61
GCDH-202ENST00000421816 ZPR1O75312 459 aa25.08■■□□□ 1.61
GCDH-202ENST00000421816 USPL1Q5W0Q7 1092 aa25.08■■□□□ 1.61
GCDH-202ENST00000421816 C8orf58Q8NAV2 365 aa25.08■■□□□ 1.61
GCDH-202ENST00000421816 ZNF330Q9Y3S2 320 aaPredicted RBP25.08■■□□□ 1.61
GCDH-202ENST00000421816 FANCIQ9NVI1 1328 aa25.08■■□□□ 1.6
GCDH-202ENST00000421816 PDIA6Q15084 440 aa25.07■■□□□ 1.6
GCDH-202ENST00000421816 BCL2L12Q9HB09 334 aa25.07■■□□□ 1.6
GCDH-202ENST00000421816 NPM2Q86SE8 214 aaKnown RBP25.06■■□□□ 1.6
GCDH-202ENST00000421816 ARXQ96QS3 562 aa25.06■■□□□ 1.6
GCDH-202ENST00000421816 TBC1D2BQ9UPU7 963 aa25.06■■□□□ 1.6
GCDH-202ENST00000421816 FKBP8Q14318 412 aa25.05■■□□□ 1.6
GCDH-202ENST00000421816 HDGFL1Q5TGJ6 251 aa25.05■■□□□ 1.6
GCDH-202ENST00000421816 LRP10Q7Z4F1 713 aa25.05■■□□□ 1.6
GCDH-202ENST00000421816 DZIP3Q86Y13 1208 aaKnown RBP25.05■■□□□ 1.6
GCDH-202ENST00000421816 ELL2O00472 640 aaPredicted RBP25.04■■□□□ 1.6
GCDH-202ENST00000421816 CAMTA2O94983 1202 aa25.04■■□□□ 1.6
GCDH-202ENST00000421816 TSPYL6Q8N831 410 aa25.04■■□□□ 1.6
GCDH-202ENST00000421816 NECTIN2Q92692 538 aa25.04■■□□□ 1.6
GCDH-202ENST00000421816 MYH16Q9H6N6 1097 aa25.04■■□□□ 1.6
GCDH-202ENST00000421816 MYL6BP14649 208 aa25.03■■□□□ 1.6
GCDH-202ENST00000421816 GOLGA2Q08379 1002 aa25.03■■□□□ 1.6
GCDH-202ENST00000421816 PROSER3Q2NL68 480 aa25.03■■□□□ 1.6
GCDH-202ENST00000421816 DDX21Q9NR30 783 aaKnown RBP eCLIP25.03■■□□□ 1.6
GCDH-202ENST00000421816 PPP1R1BQ9UD71 204 aaPredicted RBP25.03■■□□□ 1.6
GCDH-202ENST00000421816 MMP10P09238 476 aa25.02■■□□□ 1.6
GCDH-202ENST00000421816 SRCAPQ6ZRS2 3230 aa25.01■■□□□ 1.59
GCDH-202ENST00000421816 TM4SF1P30408 202 aa25.01■■□□□ 1.59
GCDH-202ENST00000421816 CHPF2Q9P2E5 772 aa25.01■■□□□ 1.59
GCDH-202ENST00000421816 RGL2O15211 777 aa25■■□□□ 1.59
GCDH-202ENST00000421816 ANXA1P04083 346 aa25■■□□□ 1.59
GCDH-202ENST00000421816 TWISTNBQ3B726 338 aaPredicted RBP25■■□□□ 1.59
GCDH-202ENST00000421816 E9PSI1 815 aa24.99■■□□□ 1.59
GCDH-202ENST00000421816 EXOSC9Q06265 439 aaKnown RBP24.99■■□□□ 1.59
GCDH-202ENST00000421816 CHMP4AQ9BY43 222 aa24.99■■□□□ 1.59
GCDH-202ENST00000421816 DBF4Q9UBU7 674 aaPredicted RBP24.99■■□□□ 1.59
GCDH-202ENST00000421816 SLFN5Q08AF3 891 aa24.98■■□□□ 1.59
GCDH-202ENST00000421816 TTLL7Q6ZT98 887 aa24.98■■□□□ 1.59
GCDH-202ENST00000421816 DDR1Q08345 913 aa24.97■■□□□ 1.59
GCDH-202ENST00000421816 NFIXQ14938 502 aa24.97■■□□□ 1.59
GCDH-202ENST00000421816 CLEC4GQ6UXB4 293 aa24.97■■□□□ 1.59
GCDH-202ENST00000421816 NUP98P52948 1817 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms