RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 CCDC27Q2M243 656 aa25.88■■□□□ 1.73
RPUSD3-202ENST00000418713 MIS18AQ9NYP9 233 aa25.88■■□□□ 1.73
RPUSD3-202ENST00000418713 A0A087WZG4 1122 aa25.87■■□□□ 1.73
RPUSD3-202ENST00000418713 INTS5Q6P9B9 1019 aaKnown RBP25.87■■□□□ 1.73
RPUSD3-202ENST00000418713 COL5A3P25940 1745 aaPredicted RBP25.87■■□□□ 1.73
RPUSD3-202ENST00000418713 CFAP44Q96MT7 982 aa25.86■■□□□ 1.73
RPUSD3-202ENST00000418713 UBR3Q6ZT12 1888 aa25.85■■□□□ 1.73
RPUSD3-202ENST00000418713 EIF4A1P60842 406 aaKnown RBP25.85■■□□□ 1.73
RPUSD3-202ENST00000418713 GNAI1P63096 354 aa25.85■■□□□ 1.73
RPUSD3-202ENST00000418713 ARHGEF1Q92888 912 aaKnown RBP25.85■■□□□ 1.73
RPUSD3-202ENST00000418713 CHL1O00533 1208 aa25.84■■□□□ 1.73
RPUSD3-202ENST00000418713 NLGN1Q8N2Q7 840 aa25.84■■□□□ 1.73
RPUSD3-202ENST00000418713 LAS1LQ9Y4W2 734 aaKnown RBP25.84■■□□□ 1.73
RPUSD3-202ENST00000418713 TJP1Q07157 1748 aa25.83■■□□□ 1.73
RPUSD3-202ENST00000418713 ZPR1O75312 459 aa25.83■■□□□ 1.73
RPUSD3-202ENST00000418713 TUBGCP6Q96RT7 1819 aa25.82■■□□□ 1.72
RPUSD3-202ENST00000418713 CANXP27824 592 aaKnown RBP25.82■■□□□ 1.72
RPUSD3-202ENST00000418713 IL6STP40189 918 aaPredicted RBP25.82■■□□□ 1.72
RPUSD3-202ENST00000418713 CHMP4AQ9BY43 222 aa25.82■■□□□ 1.72
RPUSD3-202ENST00000418713 GIGYF1O75420 1035 aaPredicted RBP25.81■■□□□ 1.72
RPUSD3-202ENST00000418713 PTGER2P43116 358 aa25.81■■□□□ 1.72
RPUSD3-202ENST00000418713 IFT57Q9NWB7 429 aa25.81■■□□□ 1.72
RPUSD3-202ENST00000418713 ZBTB1Q9Y2K1 713 aa25.81■■□□□ 1.72
RPUSD3-202ENST00000418713 USP16Q9Y5T5 823 aa25.81■■□□□ 1.72
RPUSD3-202ENST00000418713 SOS1Q07889 1333 aaPredicted RBP25.81■■□□□ 1.72
RPUSD3-202ENST00000418713 MYH14Q7Z406 1995 aaKnown RBP25.8■■□□□ 1.72
RPUSD3-202ENST00000418713 ARXQ96QS3 562 aa25.8■■□□□ 1.72
RPUSD3-202ENST00000418713 EIF5P55010 431 aaKnown RBP25.78■■□□□ 1.72
RPUSD3-202ENST00000418713 AMIGO3Q86WK7 504 aa25.78■■□□□ 1.72
RPUSD3-202ENST00000418713 SGIP1Q9BQI5 828 aa25.78■■□□□ 1.72
RPUSD3-202ENST00000418713 KDM3BQ7LBC6 1761 aa25.77■■□□□ 1.72
RPUSD3-202ENST00000418713 WWC1Q8IX03 1113 aa25.77■■□□□ 1.72
RPUSD3-202ENST00000418713 NARFQ9UHQ1 456 aa25.77■■□□□ 1.72
RPUSD3-202ENST00000418713 A1BGP04217 495 aa25.76■■□□□ 1.71
RPUSD3-202ENST00000418713 HOXB7P09629 217 aa25.76■■□□□ 1.71
RPUSD3-202ENST00000418713 WDR63Q8IWG1 891 aa25.76■■□□□ 1.71
RPUSD3-202ENST00000418713 ERBB4Q15303 1308 aa25.76■■□□□ 1.71
RPUSD3-202ENST00000418713 COL15A1P39059 1388 aa25.76■■□□□ 1.71
RPUSD3-202ENST00000418713 IL16Q14005 1332 aa25.75■■□□□ 1.71
RPUSD3-202ENST00000418713 USP42Q9H9J4 1324 aaKnown RBP25.74■■□□□ 1.71
RPUSD3-202ENST00000418713 ZNF853P0CG23 659 aa25.74■■□□□ 1.71
RPUSD3-202ENST00000418713 MSL1Q68DK7 614 aa25.74■■□□□ 1.71
RPUSD3-202ENST00000418713 ZNF330Q9Y3S2 320 aaPredicted RBP25.74■■□□□ 1.71
RPUSD3-202ENST00000418713 GYS1P13807 737 aa25.73■■□□□ 1.71
RPUSD3-202ENST00000418713 SMIM5Q71RC9 77 aa25.73■■□□□ 1.71
RPUSD3-202ENST00000418713 PRAMEF22A3QJZ6 481 aa25.72■■□□□ 1.71
RPUSD3-202ENST00000418713 DCAF8L1A6NGE4 600 aa25.72■■□□□ 1.71
RPUSD3-202ENST00000418713 MBIPQ9NS73 344 aa25.72■■□□□ 1.71
RPUSD3-202ENST00000418713 PARP3Q9Y6F1 533 aa25.71■■□□□ 1.71
RPUSD3-202ENST00000418713 RGL2O15211 777 aa25.7■■□□□ 1.7
RPUSD3-202ENST00000418713 USPL1Q5W0Q7 1092 aa25.7■■□□□ 1.7
RPUSD3-202ENST00000418713 COL24A1Q17RW2 1714 aa25.7■■□□□ 1.7
RPUSD3-202ENST00000418713 EIF2S2P20042 333 aaKnown RBP25.69■■□□□ 1.7
RPUSD3-202ENST00000418713 MIER1Q8N108 512 aa25.69■■□□□ 1.7
RPUSD3-202ENST00000418713 ZNF652Q9Y2D9 606 aa25.69■■□□□ 1.7
RPUSD3-202ENST00000418713 SALL2Q9Y467 1007 aaPredicted RBP25.69■■□□□ 1.7
RPUSD3-202ENST00000418713 DZIP3Q86Y13 1208 aaKnown RBP25.68■■□□□ 1.7
RPUSD3-202ENST00000418713 MMP10P09238 476 aa25.67■■□□□ 1.7
RPUSD3-202ENST00000418713 CLEC4GQ6UXB4 293 aa25.67■■□□□ 1.7
RPUSD3-202ENST00000418713 SRP68Q9UHB9 627 aaKnown RBP25.67■■□□□ 1.7
RPUSD3-202ENST00000418713 CD2APQ9Y5K6 639 aa25.67■■□□□ 1.7
RPUSD3-202ENST00000418713 DUSP27Q5VZP5 1158 aa25.66■■□□□ 1.7
RPUSD3-202ENST00000418713 SYT17Q9BSW7 474 aa25.66■■□□□ 1.7
RPUSD3-202ENST00000418713 FHDC1Q9C0D6 1143 aaPredicted RBP25.66■■□□□ 1.7
RPUSD3-202ENST00000418713 TBC1D2BQ9UPU7 963 aa25.66■■□□□ 1.7
RPUSD3-202ENST00000418713 LAMB4A4D0S4 1761 aa25.65■■□□□ 1.7
RPUSD3-202ENST00000418713 FKBP8Q14318 412 aa25.65■■□□□ 1.7
RPUSD3-202ENST00000418713 NBPF26B4DH59 902 aa25.64■■□□□ 1.7
RPUSD3-202ENST00000418713 NBPF10Q6P3W6 841 aaKnown RBP25.64■■□□□ 1.7
RPUSD3-202ENST00000418713 KIF6Q6ZMV9 814 aa25.64■■□□□ 1.7
RPUSD3-202ENST00000418713 KLHL34Q8N239 644 aa25.64■■□□□ 1.7
RPUSD3-202ENST00000418713 NBPF15Q8N660 670 aa25.64■■□□□ 1.7
RPUSD3-202ENST00000418713 MYH16Q9H6N6 1097 aa25.64■■□□□ 1.7
RPUSD3-202ENST00000418713 GOLGA2Q08379 1002 aa25.63■■□□□ 1.69
RPUSD3-202ENST00000418713 HDGFL1Q5TGJ6 251 aa25.63■■□□□ 1.69
RPUSD3-202ENST00000418713 C4AP0C0L4 1744 aa25.63■■□□□ 1.69
RPUSD3-202ENST00000418713 MYL6BP14649 208 aa25.62■■□□□ 1.69
RPUSD3-202ENST00000418713 TM4SF1P30408 202 aa25.62■■□□□ 1.69
RPUSD3-202ENST00000418713 DBF4Q9UBU7 674 aaPredicted RBP25.62■■□□□ 1.69
RPUSD3-202ENST00000418713 ERVV-1B6SEH8 477 aa25.61■■□□□ 1.69
RPUSD3-202ENST00000418713 DDX21Q9NR30 783 aaKnown RBP eCLIP25.61■■□□□ 1.69
RPUSD3-202ENST00000418713 SENP3-EIF4A1A0A087X0R7 540 aa25.6■■□□□ 1.69
RPUSD3-202ENST00000418713 CAMTA2O94983 1202 aa25.6■■□□□ 1.69
RPUSD3-202ENST00000418713 PIP4K2AP48426 406 aaPredicted RBP25.6■■□□□ 1.69
RPUSD3-202ENST00000418713 SETDB2Q96T68 719 aa25.6■■□□□ 1.69
RPUSD3-202ENST00000418713 HYPKQ9NX55 129 aa25.59■■□□□ 1.69
RPUSD3-202ENST00000418713 NFIXQ14938 502 aa25.58■■□□□ 1.69
RPUSD3-202ENST00000418713 CCDC30Q5VVM6 783 aa25.58■■□□□ 1.69
RPUSD3-202ENST00000418713 BCL2L12Q9HB09 334 aa25.58■■□□□ 1.69
RPUSD3-202ENST00000418713 KRT24Q2M2I5 525 aa25.57■■□□□ 1.68
RPUSD3-202ENST00000418713 ELL2O00472 640 aaPredicted RBP25.56■■□□□ 1.68
RPUSD3-202ENST00000418713 TGFB2P61812 414 aa25.56■■□□□ 1.68
RPUSD3-202ENST00000418713 PDIA6Q15084 440 aa25.56■■□□□ 1.68
RPUSD3-202ENST00000418713 NECTIN2Q92692 538 aa25.56■■□□□ 1.68
RPUSD3-202ENST00000418713 TSR2Q969E8 191 aaKnown RBP25.56■■□□□ 1.68
RPUSD3-202ENST00000418713 MAP3K15Q6ZN16 1313 aa25.56■■□□□ 1.68
RPUSD3-202ENST00000418713 POLRMTO00411 1230 aaKnown RBP25.55■■□□□ 1.68
RPUSD3-202ENST00000418713 SERPINB2P05120 415 aa25.55■■□□□ 1.68
RPUSD3-202ENST00000418713 C8orf58Q8NAV2 365 aa25.55■■□□□ 1.68
RPUSD3-202ENST00000418713 NPHP1O15259 732 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms