RNA–Protein interactions for RNA: ENST00000418511.6

TMEM253-201, Transcript of transmembrane protein 253, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TMEM253, Length 1,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-201ENST00000418511 AMIGO3Q86WK7 504 aa15.97■□□□□ 0.15
TMEM253-201ENST00000418511 CDCA7LQ96GN5 454 aa15.97■□□□□ 0.15
TMEM253-201ENST00000418511 USP16Q9Y5T5 823 aa15.97■□□□□ 0.15
TMEM253-201ENST00000418511 CRKLP46109 303 aaKnown RBP15.96■□□□□ 0.15
TMEM253-201ENST00000418511 SLC15A2Q16348 729 aa15.96■□□□□ 0.15
TMEM253-201ENST00000418511 GOLGA2Q08379 1002 aa15.95■□□□□ 0.14
TMEM253-201ENST00000418511 NBPF14Q5TI25 921 aa15.95■□□□□ 0.14
TMEM253-201ENST00000418511 AK7Q96M32 723 aa15.95■□□□□ 0.14
TMEM253-201ENST00000418511 STK32BQ9NY57 414 aa15.95■□□□□ 0.14
TMEM253-201ENST00000418511 C4AP0C0L4 1744 aa15.95■□□□□ 0.14
TMEM253-201ENST00000418511 CNTNAP4Q9C0A0 1308 aa15.95■□□□□ 0.14
TMEM253-201ENST00000418511 GNPATO15228 680 aa15.94■□□□□ 0.14
TMEM253-201ENST00000418511 PIP4K2AP48426 406 aaPredicted RBP15.94■□□□□ 0.14
TMEM253-201ENST00000418511 INTS5Q6P9B9 1019 aaKnown RBP15.94■□□□□ 0.14
TMEM253-201ENST00000418511 C8orf58Q8NAV2 365 aa15.94■□□□□ 0.14
TMEM253-201ENST00000418511 ELL2O00472 640 aaPredicted RBP15.94■□□□□ 0.14
TMEM253-201ENST00000418511 A1BGP04217 495 aa15.94■□□□□ 0.14
TMEM253-201ENST00000418511 TSPYL6Q8N831 410 aa15.94■□□□□ 0.14
TMEM253-201ENST00000418511 CCDC87Q9NVE4 849 aa15.94■□□□□ 0.14
TMEM253-201ENST00000418511 TFCP2L1Q9NZI6 479 aa15.94■□□□□ 0.14
TMEM253-201ENST00000418511 ZBTB1Q9Y2K1 713 aa15.94■□□□□ 0.14
TMEM253-201ENST00000418511 STARD3NLO95772 234 aa15.93■□□□□ 0.14
TMEM253-201ENST00000418511 DUSP27Q5VZP5 1158 aa15.93■□□□□ 0.14
TMEM253-201ENST00000418511 NECTIN2Q92692 538 aa15.93■□□□□ 0.14
TMEM253-201ENST00000418511 TEX13AQ9BXU3 409 aaPredicted RBP15.93■□□□□ 0.14
TMEM253-201ENST00000418511 PDGFDQ9GZP0 370 aaPredicted RBP15.93■□□□□ 0.14
TMEM253-201ENST00000418511 ZBED9Q6R2W3 1325 aa15.92■□□□□ 0.14
TMEM253-201ENST00000418511 PHF14O94880 888 aa15.92■□□□□ 0.14
TMEM253-201ENST00000418511 EIF2S2P20042 333 aaKnown RBP15.92■□□□□ 0.14
TMEM253-201ENST00000418511 SLFN5Q08AF3 891 aa15.92■□□□□ 0.14
TMEM253-201ENST00000418511 RC3H1Q5TC82 1133 aaKnown RBP15.92■□□□□ 0.14
TMEM253-201ENST00000418511 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
TMEM253-201ENST00000418511 MYH16Q9H6N6 1097 aa15.92■□□□□ 0.14
TMEM253-201ENST00000418511 PNPLA7Q6ZV29 1317 aa15.91■□□□□ 0.14
TMEM253-201ENST00000418511 E9PSI1 815 aa15.91■□□□□ 0.14
TMEM253-201ENST00000418511 CANXP27824 592 aaKnown RBP15.91■□□□□ 0.14
TMEM253-201ENST00000418511 EXOSC9Q06265 439 aaKnown RBP15.91■□□□□ 0.14
TMEM253-201ENST00000418511 NBPF26B4DH59 902 aa15.9■□□□□ 0.14
TMEM253-201ENST00000418511 NBPF10Q6P3W6 841 aaKnown RBP15.9■□□□□ 0.14
TMEM253-201ENST00000418511 NBPF15Q8N660 670 aa15.9■□□□□ 0.14
TMEM253-201ENST00000418511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.89■□□□□ 0.13
TMEM253-201ENST00000418511 RPS6KA4O75676 772 aa15.89■□□□□ 0.13
TMEM253-201ENST00000418511 RTCBQ9Y3I0 505 aaKnown RBP15.89■□□□□ 0.13
TMEM253-201ENST00000418511 ZNF330Q9Y3S2 320 aaPredicted RBP15.89■□□□□ 0.13
TMEM253-201ENST00000418511 SOS1Q07889 1333 aaPredicted RBP15.89■□□□□ 0.13
TMEM253-201ENST00000418511 HMGB2P26583 209 aaKnown RBP15.89■□□□□ 0.13
TMEM253-201ENST00000418511 TWISTNBQ3B726 338 aaPredicted RBP15.89■□□□□ 0.13
TMEM253-201ENST00000418511 COL23A1Q86Y22 540 aaPredicted RBP15.89■□□□□ 0.13
TMEM253-201ENST00000418511 DAXXQ9UER7 740 aaPredicted RBP15.89■□□□□ 0.13
TMEM253-201ENST00000418511 COL15A1P39059 1388 aa15.88■□□□□ 0.13
TMEM253-201ENST00000418511 ANXA1P04083 346 aa15.88■□□□□ 0.13
TMEM253-201ENST00000418511 HOXB7P09629 217 aa15.88■□□□□ 0.13
TMEM253-201ENST00000418511 SSFA2P28290 1259 aa15.88■□□□□ 0.13
TMEM253-201ENST00000418511 PROSER3Q2NL68 480 aa15.88■□□□□ 0.13
TMEM253-201ENST00000418511 HDGFL1Q5TGJ6 251 aa15.88■□□□□ 0.13
TMEM253-201ENST00000418511 TRMT2AQ8IZ69 625 aaKnown RBP15.88■□□□□ 0.13
TMEM253-201ENST00000418511 MSH5O43196 834 aa15.87■□□□□ 0.13
TMEM253-201ENST00000418511 MYL6BP14649 208 aa15.87■□□□□ 0.13
TMEM253-201ENST00000418511 BCORQ6W2J9 1755 aa15.86■□□□□ 0.13
TMEM253-201ENST00000418511 TCERG1O14776 1098 aaKnown RBP15.86■□□□□ 0.13
TMEM253-201ENST00000418511 EIF5P55010 431 aaKnown RBP15.86■□□□□ 0.13
TMEM253-201ENST00000418511 PDIA6Q15084 440 aa15.86■□□□□ 0.13
TMEM253-201ENST00000418511 ARHGEF1Q92888 912 aaKnown RBP15.86■□□□□ 0.13
TMEM253-201ENST00000418511 CHPF2Q9P2E5 772 aa15.86■□□□□ 0.13
TMEM253-201ENST00000418511 SCN7AQ01118 1682 aa15.86■□□□□ 0.13
TMEM253-201ENST00000418511 COL24A1Q17RW2 1714 aa15.86■□□□□ 0.13
TMEM253-201ENST00000418511 IL6STP40189 918 aaPredicted RBP15.85■□□□□ 0.13
TMEM253-201ENST00000418511 TRAPPC3LQ5T215 181 aa15.85■□□□□ 0.13
TMEM253-201ENST00000418511 VAMP4O75379 141 aa15.84■□□□□ 0.13
TMEM253-201ENST00000418511 SRP68Q9UHB9 627 aaKnown RBP15.84■□□□□ 0.13
TMEM253-201ENST00000418511 CACNA1FO60840 1977 aa15.84■□□□□ 0.13
TMEM253-201ENST00000418511 ADRA2BP18089 450 aa15.84■□□□□ 0.13
TMEM253-201ENST00000418511 LRP10Q7Z4F1 713 aa15.84■□□□□ 0.13
TMEM253-201ENST00000418511 ERBB4Q15303 1308 aa15.83■□□□□ 0.13
TMEM253-201ENST00000418511 ZBTB7AO95365 584 aa15.83■□□□□ 0.12
TMEM253-201ENST00000418511 RFC4P35249 363 aa15.83■□□□□ 0.12
TMEM253-201ENST00000418511 FLAD1Q8NFF5 587 aa15.83■□□□□ 0.12
TMEM253-201ENST00000418511 ARXQ96QS3 562 aa15.83■□□□□ 0.12
TMEM253-201ENST00000418511 SPON1Q9HCB6 807 aa15.83■□□□□ 0.12
TMEM253-201ENST00000418511 DDX21Q9NR30 783 aaKnown RBP eCLIP15.83■□□□□ 0.12
TMEM253-201ENST00000418511 TBC1D2BQ9UPU7 963 aa15.83■□□□□ 0.12
TMEM253-201ENST00000418511 NUP98P52948 1817 aa15.82■□□□□ 0.12
TMEM253-201ENST00000418511 CCDC30Q5VVM6 783 aa15.82■□□□□ 0.12
TMEM253-201ENST00000418511 MSL1Q68DK7 614 aa15.82■□□□□ 0.12
TMEM253-201ENST00000418511 PTGER2P43116 358 aa15.81■□□□□ 0.12
TMEM253-201ENST00000418511 TTLL7Q6ZT98 887 aa15.81■□□□□ 0.12
TMEM253-201ENST00000418511 DBF4Q9UBU7 674 aaPredicted RBP15.81■□□□□ 0.12
TMEM253-201ENST00000418511 USP42Q9H9J4 1324 aaKnown RBP15.81■□□□□ 0.12
TMEM253-201ENST00000418511 USPL1Q5W0Q7 1092 aa15.8■□□□□ 0.12
TMEM253-201ENST00000418511 DZIP3Q86Y13 1208 aaKnown RBP15.8■□□□□ 0.12
TMEM253-201ENST00000418511 UTRNP46939 3433 aa15.8■□□□□ 0.12
TMEM253-201ENST00000418511 ARFGEF2Q9Y6D5 1785 aa15.8■□□□□ 0.12
TMEM253-201ENST00000418511 A0A087WZG4 1122 aa15.79■□□□□ 0.12
TMEM253-201ENST00000418511 AIMP1Q12904 312 aaKnown RBP15.79■□□□□ 0.12
TMEM253-201ENST00000418511 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
TMEM253-201ENST00000418511 XAGE3Q8WTP9 111 aa15.79■□□□□ 0.12
TMEM253-201ENST00000418511 PHAXQ9H814 394 aaKnown RBP15.79■□□□□ 0.12
TMEM253-201ENST00000418511 BCL2L12Q9HB09 334 aa15.79■□□□□ 0.12
TMEM253-201ENST00000418511 NARFQ9UHQ1 456 aa15.79■□□□□ 0.12
TMEM253-201ENST00000418511 ATF5Q9Y2D1 282 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms