RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 URI1O94763 535 aaPredicted RBP15.13■□□□□ 0.01
SCN1B-202ENST00000415950 CEP57L1Q8IYX8 460 aa15.13■□□□□ 0.01
SCN1B-202ENST00000415950 ABCC11Q96J66 1382 aa15.13■□□□□ 0.01
SCN1B-202ENST00000415950 FOXO3O43524 673 aa15.13■□□□□ 0.01
SCN1B-202ENST00000415950 GLRX3O76003 335 aaKnown RBP15.13■□□□□ 0.01
SCN1B-202ENST00000415950 CFAP100Q494V2 611 aa15.13■□□□□ 0.01
SCN1B-202ENST00000415950 RBM25P49756 843 aaKnown RBP15.13■□□□□ 0.01
SCN1B-202ENST00000415950 ZSWIM4Q9H7M6 989 aa15.13■□□□□ 0.01
SCN1B-202ENST00000415950 TMEM63CQ9P1W3 806 aa15.13■□□□□ 0.01
SCN1B-202ENST00000415950 IKQ13123 557 aaPredicted RBP15.12■□□□□ 0.01
SCN1B-202ENST00000415950 JMYQ8N9B5 988 aa15.12■□□□□ 0.01
SCN1B-202ENST00000415950 ESYT1Q9BSJ8 1104 aa15.12■□□□□ 0.01
SCN1B-202ENST00000415950 ASXL1Q8IXJ9 1541 aa15.12■□□□□ 0.01
SCN1B-202ENST00000415950 CCDC102AQ96A19 550 aa15.12■□□□□ 0.01
SCN1B-202ENST00000415950 SLC52A1Q9NWF4 448 aa15.12■□□□□ 0.01
SCN1B-202ENST00000415950 DACT1Q9NYF0 836 aa15.12■□□□□ 0.01
SCN1B-202ENST00000415950 MAGEC2Q9UBF1 373 aaPredicted RBP15.12■□□□□ 0.01
SCN1B-202ENST00000415950 HIP1O00291 1037 aa15.12■□□□□ 0.01
SCN1B-202ENST00000415950 NUP133Q8WUM0 1156 aa15.12■□□□□ 0.01
SCN1B-202ENST00000415950 ZSCAN31Q96LW9 406 aaPredicted RBP15.12■□□□□ 0.01
SCN1B-202ENST00000415950 PI4KAP2A4QPH2 592 aa15.11■□□□□ 0.01
SCN1B-202ENST00000415950 GADD45BO75293 160 aaPredicted RBP15.11■□□□□ 0.01
SCN1B-202ENST00000415950 UBE2HP62256 183 aa15.11■□□□□ 0.01
SCN1B-202ENST00000415950 PI4KAP1Q8N8J0 262 aa15.11■□□□□ 0.01
SCN1B-202ENST00000415950 POLKQ9UBT6 870 aa15.11■□□□□ 0.01
SCN1B-202ENST00000415950 CCP110O43303 1012 aa15.11■□□□□ 0.01
SCN1B-202ENST00000415950 IBSPP21815 317 aaPredicted RBP15.11■□□□□ 0.01
SCN1B-202ENST00000415950 ZHX3Q9H4I2 956 aa15.11■□□□□ 0.01
SCN1B-202ENST00000415950 DCTPP1Q9H773 170 aa15.11■□□□□ 0.01
SCN1B-202ENST00000415950 PIBF1Q8WXW3 757 aa15.11■□□□□ 0.01
SCN1B-202ENST00000415950 ZNHIT6Q9NWK9 470 aaKnown RBP15.11■□□□□ 0.01
SCN1B-202ENST00000415950 PTGS1P23219 599 aa15.11■□□□□ 0.01
SCN1B-202ENST00000415950 CFAP45Q9UL16 551 aa15.11■□□□□ 0.01
SCN1B-202ENST00000415950 TRIM35Q9UPQ4 493 aa15.11■□□□□ 0.01
SCN1B-202ENST00000415950 ZSCAN22P10073 491 aaPredicted RBP15.1■□□□□ 0.01
SCN1B-202ENST00000415950 CALRP27797 417 aaKnown RBP15.1■□□□□ 0.01
SCN1B-202ENST00000415950 MPRIPQ6WCQ1 1025 aa15.1■□□□□ 0.01
SCN1B-202ENST00000415950 NUP160Q12769 1436 aa15.1■□□□□ 0.01
SCN1B-202ENST00000415950 BTBD11A6QL63 1104 aa15.1■□□□□ 0.01
SCN1B-202ENST00000415950 ANKRD1Q15327 319 aa15.1■□□□□ 0.01
SCN1B-202ENST00000415950 ESCO1Q5FWF5 840 aa15.1■□□□□ 0.01
SCN1B-202ENST00000415950 ANTXR1Q9H6X2 564 aa15.1■□□□□ 0.01
SCN1B-202ENST00000415950 CEP85Q6P2H3 762 aa15.1■□□□□ 0.01
SCN1B-202ENST00000415950 ZNF692Q9BU19 519 aaPredicted RBP15.1■□□□□ 0.01
SCN1B-202ENST00000415950 DNAJC25Q9H1X3 360 aa15.1■□□□□ 0.01
SCN1B-202ENST00000415950 DEF6Q9H4E7 631 aa15.1■□□□□ 0.01
SCN1B-202ENST00000415950 SFPQP23246 707 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCN1B-202ENST00000415950 GTF2F1P35269 517 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCN1B-202ENST00000415950 G2E3Q7L622 706 aa15.09■□□□□ 0.01
SCN1B-202ENST00000415950 ABCA5Q8WWZ7 1642 aa15.09■□□□□ 0.01
SCN1B-202ENST00000415950 GNAT3A8MTJ3 354 aa15.09■□□□□ 0.01
SCN1B-202ENST00000415950 MCM5P33992 734 aa15.09■□□□□ 0.01
SCN1B-202ENST00000415950 ANO6Q4KMQ2 910 aa15.09■□□□□ 0.01
SCN1B-202ENST00000415950 LUZP1Q86V48 1076 aa15.09■□□□□ 0.01
SCN1B-202ENST00000415950 KIF18AQ8NI77 898 aa15.09■□□□□ 0.01
SCN1B-202ENST00000415950 LMBRD1Q9NUN5 540 aa15.09■□□□□ 0.01
SCN1B-202ENST00000415950 POLR3AO14802 1390 aaPredicted RBP15.09■□□□□ 0.01
SCN1B-202ENST00000415950 POLR3DP05423 398 aaPredicted RBP15.09■□□□□ 0.01
SCN1B-202ENST00000415950 TXLNAP40222 546 aa15.09■□□□□ 0.01
SCN1B-202ENST00000415950 ERC1Q8IUD2 1116 aa15.09■□□□□ 0.01
SCN1B-202ENST00000415950 SCAND2PQ9GZW5 306 aaPredicted RBP15.09■□□□□ 0.01
SCN1B-202ENST00000415950 NUP153P49790 1475 aaKnown RBP15.09■□□□□ 0.01
SCN1B-202ENST00000415950 CDK5RAP3Q96JB5 506 aa15.09■□□□□ 0.01
SCN1B-202ENST00000415950 CNNM1Q9NRU3 951 aa15.09■□□□□ 0.01
SCN1B-202ENST00000415950 NOL7Q9UMY1 257 aaKnown RBP15.09■□□□□ 0.01
SCN1B-202ENST00000415950 CCDC181Q5TID7 509 aa15.08■□□□□ 0
SCN1B-202ENST00000415950 TAX1BP1Q86VP1 789 aa15.08■□□□□ 0
SCN1B-202ENST00000415950 TAF3Q5VWG9 929 aa15.08■□□□□ 0
SCN1B-202ENST00000415950 TANGO6Q9C0B7 1094 aa15.08■□□□□ 0
SCN1B-202ENST00000415950 KRT18P05783 430 aaKnown RBP15.07■□□□□ 0
SCN1B-202ENST00000415950 KLHL10Q6JEL2 608 aa15.07■□□□□ 0
SCN1B-202ENST00000415950 RHPN1Q8TCX5 695 aa15.07■□□□□ 0
SCN1B-202ENST00000415950 CPLX3Q8WVH0 158 aa15.07■□□□□ 0
SCN1B-202ENST00000415950 PA2G4Q9UQ80 394 aaKnown RBP15.07■□□□□ 0
SCN1B-202ENST00000415950 TRIM22Q8IYM9 498 aa15.07■□□□□ 0
SCN1B-202ENST00000415950 USP19O94966 1318 aa15.07■□□□□ 0
SCN1B-202ENST00000415950 KIAA0754O94854 1291 aa15.07■□□□□ 0
SCN1B-202ENST00000415950 NEFHP12036 1026 aa15.07■□□□□ 0
SCN1B-202ENST00000415950 AK2P54819 239 aa15.07■□□□□ 0
SCN1B-202ENST00000415950 CCDC158Q5M9N0 1113 aa15.07■□□□□ 0
SCN1B-202ENST00000415950 TTC39AQ5SRH9 613 aa15.07■□□□□ 0
SCN1B-202ENST00000415950 ERLIN1O75477 346 aa15.07■□□□□ 0
SCN1B-202ENST00000415950 ATP2B2Q01814 1243 aa15.07■□□□□ 0
SCN1B-202ENST00000415950 CCAR1Q8IX12 1150 aaKnown RBP15.06■□□□□ 0
SCN1B-202ENST00000415950 FSIP1Q8NA03 581 aa15.06■□□□□ 0
SCN1B-202ENST00000415950 SYT1P21579 422 aa15.06■□□□□ 0
SCN1B-202ENST00000415950 HAND2P61296 217 aa15.06■□□□□ 0
SCN1B-202ENST00000415950 ARHGAP29Q52LW3 1261 aa15.06■□□□□ 0
SCN1B-202ENST00000415950 ARHGAP45Q92619 1136 aa15.06■□□□□ 0
SCN1B-202ENST00000415950 SSBP05455 408 aaKnown RBP eCLIP15.06■□□□□ 0
SCN1B-202ENST00000415950 ZC3H6P61129 1189 aaKnown RBP15.06■□□□□ 0
SCN1B-202ENST00000415950 PLEKHO1Q53GL0 409 aaPredicted RBP15.06■□□□□ 0
SCN1B-202ENST00000415950 TMC6Q7Z403 805 aa15.06■□□□□ 0
SCN1B-202ENST00000415950 SNRKQ9NRH2 765 aa15.06■□□□□ 0
SCN1B-202ENST00000415950 TMCO3Q6UWJ1 677 aa15.05■□□□□ 0
SCN1B-202ENST00000415950 PRIMPOLQ96LW4 560 aa15.05■□□□□ 0
SCN1B-202ENST00000415950 U2AF2P26368 475 aaKnown RBP eCLIP15.05■□□□□ 0
SCN1B-202ENST00000415950 DNAAF4Q8WXU2 420 aa15.05■□□□□ 0
SCN1B-202ENST00000415950 IL16Q14005 1332 aa15.05■□□□□ -0
SCN1B-202ENST00000415950 ERBB4Q15303 1308 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms