RNA–Protein interactions for RNA: ENST00000415948.5

CRAT-203, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-203ENST00000415948 IL16Q14005 1332 aa20.15■□□□□ 0.82
CRAT-203ENST00000415948 CNTNAP4Q9C0A0 1308 aa20.15■□□□□ 0.82
CRAT-203ENST00000415948 WDR63Q8IWG1 891 aa20.14■□□□□ 0.81
CRAT-203ENST00000415948 TSPYL6Q8N831 410 aa20.14■□□□□ 0.81
CRAT-203ENST00000415948 C8orf58Q8NAV2 365 aa20.14■□□□□ 0.81
CRAT-203ENST00000415948 COL24A1Q17RW2 1714 aa20.13■□□□□ 0.81
CRAT-203ENST00000415948 GNAI1P63096 354 aa20.13■□□□□ 0.81
CRAT-203ENST00000415948 HNRNPUQ00839 825 aaKnown RBP eCLIP20.13■□□□□ 0.81
CRAT-203ENST00000415948 BCORQ6W2J9 1755 aa20.13■□□□□ 0.81
CRAT-203ENST00000415948 NBPF26B4DH59 902 aa20.12■□□□□ 0.81
CRAT-203ENST00000415948 A1BGP04217 495 aa20.12■□□□□ 0.81
CRAT-203ENST00000415948 NBPF14Q5TI25 921 aa20.12■□□□□ 0.81
CRAT-203ENST00000415948 NBPF10Q6P3W6 841 aaKnown RBP20.12■□□□□ 0.81
CRAT-203ENST00000415948 NBPF15Q8N660 670 aa20.12■□□□□ 0.81
CRAT-203ENST00000415948 STK32BQ9NY57 414 aa20.12■□□□□ 0.81
CRAT-203ENST00000415948 SCN7AQ01118 1682 aa20.12■□□□□ 0.81
CRAT-203ENST00000415948 GNPATO15228 680 aa20.11■□□□□ 0.81
CRAT-203ENST00000415948 SNRPA1P09661 255 aaKnown RBP20.11■□□□□ 0.81
CRAT-203ENST00000415948 SOS1Q07889 1333 aaPredicted RBP20.1■□□□□ 0.81
CRAT-203ENST00000415948 PHF14O94880 888 aa20.1■□□□□ 0.81
CRAT-203ENST00000415948 COL23A1Q86Y22 540 aaPredicted RBP20.1■□□□□ 0.81
CRAT-203ENST00000415948 NGEFQ8N5V2 710 aa20.1■□□□□ 0.81
CRAT-203ENST00000415948 CCDC87Q9NVE4 849 aa20.1■□□□□ 0.81
CRAT-203ENST00000415948 CALD1Q05682 793 aaKnown RBP20.09■□□□□ 0.81
CRAT-203ENST00000415948 PROSER3Q2NL68 480 aa20.09■□□□□ 0.81
CRAT-203ENST00000415948 RC3H1Q5TC82 1133 aaKnown RBP20.09■□□□□ 0.81
CRAT-203ENST00000415948 AK7Q96M32 723 aa20.09■□□□□ 0.81
CRAT-203ENST00000415948 ELL2O00472 640 aaPredicted RBP20.08■□□□□ 0.81
CRAT-203ENST00000415948 ANXA1P04083 346 aa20.08■□□□□ 0.81
CRAT-203ENST00000415948 SLFN5Q08AF3 891 aa20.08■□□□□ 0.81
CRAT-203ENST00000415948 DUSP27Q5VZP5 1158 aa20.08■□□□□ 0.81
CRAT-203ENST00000415948 LRP10Q7Z4F1 713 aa20.08■□□□□ 0.81
CRAT-203ENST00000415948 NECTIN2Q92692 538 aa20.08■□□□□ 0.81
CRAT-203ENST00000415948 TFCP2L1Q9NZI6 479 aa20.08■□□□□ 0.81
CRAT-203ENST00000415948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.07■□□□□ 0.8
CRAT-203ENST00000415948 PDIA6Q15084 440 aa20.07■□□□□ 0.8
CRAT-203ENST00000415948 TRMT2AQ8IZ69 625 aaKnown RBP20.07■□□□□ 0.8
CRAT-203ENST00000415948 RPS6KA4O75676 772 aa20.06■□□□□ 0.8
CRAT-203ENST00000415948 CANXP27824 592 aaKnown RBP20.06■□□□□ 0.8
CRAT-203ENST00000415948 EXOSC9Q06265 439 aaKnown RBP20.06■□□□□ 0.8
CRAT-203ENST00000415948 GOLGA2Q08379 1002 aa20.06■□□□□ 0.8
CRAT-203ENST00000415948 COL15A1P39059 1388 aa20.06■□□□□ 0.8
CRAT-203ENST00000415948 EIF2S2P20042 333 aaKnown RBP20.05■□□□□ 0.8
CRAT-203ENST00000415948 SRP68Q9UHB9 627 aaKnown RBP20.05■□□□□ 0.8
CRAT-203ENST00000415948 ZBED9Q6R2W3 1325 aa20.04■□□□□ 0.8
CRAT-203ENST00000415948 EIF5P55010 431 aaKnown RBP20.04■□□□□ 0.8
CRAT-203ENST00000415948 TCERG1O14776 1098 aaKnown RBP20.03■□□□□ 0.8
CRAT-203ENST00000415948 STARD3NLO95772 234 aa20.03■□□□□ 0.8
CRAT-203ENST00000415948 SSFA2P28290 1259 aa20.03■□□□□ 0.8
CRAT-203ENST00000415948 ARHGEF1Q92888 912 aaKnown RBP20.03■□□□□ 0.8
CRAT-203ENST00000415948 TEX13AQ9BXU3 409 aaPredicted RBP20.03■□□□□ 0.8
CRAT-203ENST00000415948 ZBTB7AO95365 584 aa20.02■□□□□ 0.8
CRAT-203ENST00000415948 CHPF2Q9P2E5 772 aa20.02■□□□□ 0.8
CRAT-203ENST00000415948 RTCBQ9Y3I0 505 aaKnown RBP20.02■□□□□ 0.8
CRAT-203ENST00000415948 E9PSI1 815 aa20.01■□□□□ 0.79
CRAT-203ENST00000415948 MSL1Q68DK7 614 aa20.01■□□□□ 0.79
CRAT-203ENST00000415948 BCL2L12Q9HB09 334 aa20.01■□□□□ 0.79
CRAT-203ENST00000415948 ARFGEF2Q9Y6D5 1785 aa20■□□□□ 0.79
CRAT-203ENST00000415948 NUP98P52948 1817 aa20■□□□□ 0.79
CRAT-203ENST00000415948 VAMP4O75379 141 aa20■□□□□ 0.79
CRAT-203ENST00000415948 HOXB7P09629 217 aa20■□□□□ 0.79
CRAT-203ENST00000415948 TWISTNBQ3B726 338 aaPredicted RBP20■□□□□ 0.79
CRAT-203ENST00000415948 HDGFL1Q5TGJ6 251 aa20■□□□□ 0.79
CRAT-203ENST00000415948 LRP5O75197 1615 aa20■□□□□ 0.79
CRAT-203ENST00000415948 USP42Q9H9J4 1324 aaKnown RBP20■□□□□ 0.79
CRAT-203ENST00000415948 MYL6BP14649 208 aa19.99■□□□□ 0.79
CRAT-203ENST00000415948 IL6STP40189 918 aaPredicted RBP19.99■□□□□ 0.79
CRAT-203ENST00000415948 TTLL7Q6ZT98 887 aa19.99■□□□□ 0.79
CRAT-203ENST00000415948 MYH16Q9H6N6 1097 aa19.99■□□□□ 0.79
CRAT-203ENST00000415948 ZNF330Q9Y3S2 320 aaPredicted RBP19.99■□□□□ 0.79
CRAT-203ENST00000415948 YTHDC1Q96MU7 727 aaKnown RBP19.98■□□□□ 0.79
CRAT-203ENST00000415948 SGIP1Q9BQI5 828 aa19.98■□□□□ 0.79
CRAT-203ENST00000415948 ANKRD36CQ5JPF3 1778 aa19.98■□□□□ 0.79
CRAT-203ENST00000415948 AFDNP55196 1824 aaKnown RBP19.97■□□□□ 0.79
CRAT-203ENST00000415948 GYS1P13807 737 aa19.97■□□□□ 0.79
CRAT-203ENST00000415948 TRAPPC3LQ5T215 181 aa19.97■□□□□ 0.79
CRAT-203ENST00000415948 TBC1D2BQ9UPU7 963 aa19.97■□□□□ 0.79
CRAT-203ENST00000415948 MSH5O43196 834 aa19.96■□□□□ 0.79
CRAT-203ENST00000415948 CAMTA2O94983 1202 aa19.96■□□□□ 0.79
CRAT-203ENST00000415948 ADRA2BP18089 450 aa19.96■□□□□ 0.79
CRAT-203ENST00000415948 PTGER2P43116 358 aa19.96■□□□□ 0.79
CRAT-203ENST00000415948 USPL1Q5W0Q7 1092 aa19.96■□□□□ 0.79
CRAT-203ENST00000415948 ATF5Q9Y2D1 282 aaPredicted RBP19.96■□□□□ 0.79
CRAT-203ENST00000415948 ERBB4Q15303 1308 aa19.96■□□□□ 0.79
CRAT-203ENST00000415948 FKBP8Q14318 412 aa19.95■□□□□ 0.78
CRAT-203ENST00000415948 G2E3Q7L622 706 aa19.95■□□□□ 0.78
CRAT-203ENST00000415948 PHAXQ9H814 394 aaKnown RBP19.95■□□□□ 0.78
CRAT-203ENST00000415948 NRXN2Q9P2S2 1712 aa19.94■□□□□ 0.78
CRAT-203ENST00000415948 CACNA1FO60840 1977 aa19.94■□□□□ 0.78
CRAT-203ENST00000415948 DDX21Q9NR30 783 aaKnown RBP eCLIP19.94■□□□□ 0.78
CRAT-203ENST00000415948 NARFQ9UHQ1 456 aa19.94■□□□□ 0.78
CRAT-203ENST00000415948 SRCAPQ6ZRS2 3230 aa19.94■□□□□ 0.78
CRAT-203ENST00000415948 HLFQ16534 295 aa19.93■□□□□ 0.78
CRAT-203ENST00000415948 DZIP3Q86Y13 1208 aaKnown RBP19.93■□□□□ 0.78
CRAT-203ENST00000415948 XAGE3Q8WTP9 111 aa19.93■□□□□ 0.78
CRAT-203ENST00000415948 RFC4P35249 363 aa19.92■□□□□ 0.78
CRAT-203ENST00000415948 DDR1Q08345 913 aa19.92■□□□□ 0.78
CRAT-203ENST00000415948 FLAD1Q8NFF5 587 aa19.92■□□□□ 0.78
CRAT-203ENST00000415948 MTFR1LQ9H019 292 aa19.92■□□□□ 0.78
CRAT-203ENST00000415948 KIAA1551Q9HCM1 1747 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms