RNA–Protein interactions for RNA: ENST00000412777.6

LRTOMT-204, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4

Gene LRTOMT, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-204ENST00000412777 SOS1Q07889 1333 aaPredicted RBP11.83□□□□□ -0.52
LRTOMT-204ENST00000412777 STARD3NLO95772 234 aa11.82□□□□□ -0.52
LRTOMT-204ENST00000412777 PNISRQ8TF01 805 aaKnown RBP11.82□□□□□ -0.52
LRTOMT-204ENST00000412777 MIS18AQ9NYP9 233 aa11.82□□□□□ -0.52
LRTOMT-204ENST00000412777 ZBTB1Q9Y2K1 713 aa11.82□□□□□ -0.52
LRTOMT-204ENST00000412777 RFC4P35249 363 aa11.81□□□□□ -0.52
LRTOMT-204ENST00000412777 FHDC1Q9C0D6 1143 aaPredicted RBP11.81□□□□□ -0.52
LRTOMT-204ENST00000412777 MRS2Q9HD23 443 aa11.81□□□□□ -0.52
LRTOMT-204ENST00000412777 TRIM35Q9UPQ4 493 aa11.81□□□□□ -0.52
LRTOMT-204ENST00000412777 SNRPA1P09661 255 aaKnown RBP11.8□□□□□ -0.52
LRTOMT-204ENST00000412777 NEUROD2Q15784 382 aa11.8□□□□□ -0.52
LRTOMT-204ENST00000412777 SYT17Q9BSW7 474 aa11.8□□□□□ -0.52
LRTOMT-204ENST00000412777 USP42Q9H9J4 1324 aaKnown RBP11.8□□□□□ -0.52
LRTOMT-204ENST00000412777 COL15A1P39059 1388 aa11.79□□□□□ -0.52
LRTOMT-204ENST00000412777 PRAMEF22A3QJZ6 481 aa11.79□□□□□ -0.52
LRTOMT-204ENST00000412777 APAF1O14727 1248 aa11.79□□□□□ -0.52
LRTOMT-204ENST00000412777 GYS1P13807 737 aa11.79□□□□□ -0.52
LRTOMT-204ENST00000412777 CANXP27824 592 aaKnown RBP11.79□□□□□ -0.52
LRTOMT-204ENST00000412777 EIF5P55010 431 aaKnown RBP11.79□□□□□ -0.52
LRTOMT-204ENST00000412777 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
LRTOMT-204ENST00000412777 BABAM1Q9NWV8 329 aa11.79□□□□□ -0.52
LRTOMT-204ENST00000412777 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
LRTOMT-204ENST00000412777 USP16Q9Y5T5 823 aa11.79□□□□□ -0.52
LRTOMT-204ENST00000412777 LAMB4A4D0S4 1761 aa11.79□□□□□ -0.52
LRTOMT-204ENST00000412777 A1BGP04217 495 aa11.78□□□□□ -0.52
LRTOMT-204ENST00000412777 EIF4A1P60842 406 aaKnown RBP11.78□□□□□ -0.52
LRTOMT-204ENST00000412777 TSPYL4Q9UJ04 414 aa11.78□□□□□ -0.52
LRTOMT-204ENST00000412777 GIGYF1O75420 1035 aaPredicted RBP11.77□□□□□ -0.53
LRTOMT-204ENST00000412777 MMP10P09238 476 aa11.77□□□□□ -0.53
LRTOMT-204ENST00000412777 IL6STP40189 918 aaPredicted RBP11.77□□□□□ -0.53
LRTOMT-204ENST00000412777 NARFQ9UHQ1 456 aa11.77□□□□□ -0.53
LRTOMT-204ENST00000412777 A0A087WZG4 1122 aa11.76□□□□□ -0.53
LRTOMT-204ENST00000412777 CHL1O00533 1208 aa11.76□□□□□ -0.53
LRTOMT-204ENST00000412777 ZPR1O75312 459 aa11.76□□□□□ -0.53
LRTOMT-204ENST00000412777 FKBP8Q14318 412 aa11.76□□□□□ -0.53
LRTOMT-204ENST00000412777 USPL1Q5W0Q7 1092 aa11.76□□□□□ -0.53
LRTOMT-204ENST00000412777 KLHL34Q8N239 644 aa11.75□□□□□ -0.53
LRTOMT-204ENST00000412777 BCL2L12Q9HB09 334 aa11.75□□□□□ -0.53
LRTOMT-204ENST00000412777 CD2APQ9Y5K6 639 aa11.75□□□□□ -0.53
LRTOMT-204ENST00000412777 SCN7AQ01118 1682 aa11.75□□□□□ -0.53
LRTOMT-204ENST00000412777 KIF13BQ9NQT8 1826 aa11.74□□□□□ -0.53
LRTOMT-204ENST00000412777 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
LRTOMT-204ENST00000412777 PIP4K2AP48426 406 aaPredicted RBP11.74□□□□□ -0.53
LRTOMT-204ENST00000412777 NBPF10Q6P3W6 841 aaKnown RBP11.74□□□□□ -0.53
LRTOMT-204ENST00000412777 NBPF15Q8N660 670 aa11.74□□□□□ -0.53
LRTOMT-204ENST00000412777 NLGN2Q8NFZ4 835 aa11.74□□□□□ -0.53
LRTOMT-204ENST00000412777 ZNF330Q9Y3S2 320 aaPredicted RBP11.74□□□□□ -0.53
LRTOMT-204ENST00000412777 ZNF853P0CG23 659 aa11.73□□□□□ -0.53
LRTOMT-204ENST00000412777 TM4SF1P30408 202 aa11.73□□□□□ -0.53
LRTOMT-204ENST00000412777 CALD1Q05682 793 aaKnown RBP11.73□□□□□ -0.53
LRTOMT-204ENST00000412777 DDR1Q08345 913 aa11.73□□□□□ -0.53
LRTOMT-204ENST00000412777 NCBP3Q53F19 620 aaKnown RBP11.73□□□□□ -0.53
LRTOMT-204ENST00000412777 BCORQ6W2J9 1755 aa11.73□□□□□ -0.53
LRTOMT-204ENST00000412777 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
LRTOMT-204ENST00000412777 TBC1D2BQ9UPU7 963 aa11.73□□□□□ -0.53
LRTOMT-204ENST00000412777 LAS1LQ9Y4W2 734 aaKnown RBP11.73□□□□□ -0.53
LRTOMT-204ENST00000412777 PARP3Q9Y6F1 533 aa11.73□□□□□ -0.53
LRTOMT-204ENST00000412777 AFDNP55196 1824 aaKnown RBP11.72□□□□□ -0.53
LRTOMT-204ENST00000412777 C10orf71Q711Q0 1435 aa11.72□□□□□ -0.53
LRTOMT-204ENST00000412777 POLRMTO00411 1230 aaKnown RBP11.72□□□□□ -0.53
LRTOMT-204ENST00000412777 CAMTA2O94983 1202 aa11.72□□□□□ -0.53
LRTOMT-204ENST00000412777 NFIXQ14938 502 aa11.72□□□□□ -0.53
LRTOMT-204ENST00000412777 CCDC27Q2M243 656 aa11.72□□□□□ -0.53
LRTOMT-204ENST00000412777 NPM2Q86SE8 214 aaKnown RBP11.72□□□□□ -0.53
LRTOMT-204ENST00000412777 IFT57Q9NWB7 429 aa11.72□□□□□ -0.53
LRTOMT-204ENST00000412777 ERBB4Q15303 1308 aa11.71□□□□□ -0.53
LRTOMT-204ENST00000412777 DZIP3Q86Y13 1208 aaKnown RBP11.71□□□□□ -0.53
LRTOMT-204ENST00000412777 FAM9BQ8IZU0 186 aa11.71□□□□□ -0.53
LRTOMT-204ENST00000412777 MBIPQ9NS73 344 aa11.71□□□□□ -0.53
LRTOMT-204ENST00000412777 KIAA1551Q9HCM1 1747 aa11.71□□□□□ -0.54
LRTOMT-204ENST00000412777 NRXN2Q9P2S2 1712 aa11.71□□□□□ -0.54
LRTOMT-204ENST00000412777 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
LRTOMT-204ENST00000412777 DCAF8L1A6NGE4 600 aa11.7□□□□□ -0.54
LRTOMT-204ENST00000412777 GNAI1P63096 354 aa11.7□□□□□ -0.54
LRTOMT-204ENST00000412777 KRT24Q2M2I5 525 aa11.7□□□□□ -0.54
LRTOMT-204ENST00000412777 WWC1Q8IX03 1113 aa11.7□□□□□ -0.54
LRTOMT-204ENST00000412777 UTRNP46939 3433 aa11.69□□□□□ -0.54
LRTOMT-204ENST00000412777 RGL2O15211 777 aa11.69□□□□□ -0.54
LRTOMT-204ENST00000412777 HOXB7P09629 217 aa11.69□□□□□ -0.54
LRTOMT-204ENST00000412777 EIF2S2P20042 333 aaKnown RBP11.69□□□□□ -0.54
LRTOMT-204ENST00000412777 TBC1D9BQ66K14 1250 aa11.69□□□□□ -0.54
LRTOMT-204ENST00000412777 CLEC4GQ6UXB4 293 aa11.69□□□□□ -0.54
LRTOMT-204ENST00000412777 N4BP2Q86UW6 1770 aaPredicted RBP11.69□□□□□ -0.54
LRTOMT-204ENST00000412777 PXDNLA1KZ92 1463 aa11.69□□□□□ -0.54
LRTOMT-204ENST00000412777 GOLGB1Q14789 3259 aaKnown RBP11.68□□□□□ -0.54
LRTOMT-204ENST00000412777 NUP98P52948 1817 aa11.68□□□□□ -0.54
LRTOMT-204ENST00000412777 CCER2I3L3R5 266 aa11.68□□□□□ -0.54
LRTOMT-204ENST00000412777 TGFB2P61812 414 aa11.68□□□□□ -0.54
LRTOMT-204ENST00000412777 PDIA6Q15084 440 aa11.68□□□□□ -0.54
LRTOMT-204ENST00000412777 BICDL1Q6ZP65 573 aa11.68□□□□□ -0.54
LRTOMT-204ENST00000412777 LRP10Q7Z4F1 713 aa11.68□□□□□ -0.54
LRTOMT-204ENST00000412777 IL16Q14005 1332 aa11.67□□□□□ -0.54
LRTOMT-204ENST00000412777 CHD4Q14839 1912 aa11.67□□□□□ -0.54
LRTOMT-204ENST00000412777 SERPINB2P05120 415 aa11.67□□□□□ -0.54
LRTOMT-204ENST00000412777 MYL6BP14649 208 aa11.67□□□□□ -0.54
LRTOMT-204ENST00000412777 GPR162Q16538 588 aa11.67□□□□□ -0.54
LRTOMT-204ENST00000412777 PROSER3Q2NL68 480 aa11.67□□□□□ -0.54
LRTOMT-204ENST00000412777 DUSP27Q5VZP5 1158 aa11.67□□□□□ -0.54
LRTOMT-204ENST00000412777 NGEFQ8N5V2 710 aa11.67□□□□□ -0.54
LRTOMT-204ENST00000412777 ZNF652Q9Y2D9 606 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms