RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 STARD3NLO95772 234 aa24.87■■□□□ 1.57
TRIM56-202ENST00000412507 GYS1P13807 737 aa24.87■■□□□ 1.57
TRIM56-202ENST00000412507 RIPK4P57078 832 aa24.87■■□□□ 1.57
TRIM56-202ENST00000412507 TEX13AQ9BXU3 409 aaPredicted RBP24.87■■□□□ 1.57
TRIM56-202ENST00000412507 MIS18AQ9NYP9 233 aa24.87■■□□□ 1.57
TRIM56-202ENST00000412507 LAMB4A4D0S4 1761 aa24.87■■□□□ 1.57
TRIM56-202ENST00000412507 CANXP27824 592 aaKnown RBP24.86■■□□□ 1.57
TRIM56-202ENST00000412507 TMPOP42166 694 aaKnown RBP24.86■■□□□ 1.57
TRIM56-202ENST00000412507 NLGN1Q8N2Q7 840 aa24.86■■□□□ 1.57
TRIM56-202ENST00000412507 NLGN2Q8NFZ4 835 aa24.86■■□□□ 1.57
TRIM56-202ENST00000412507 USP42Q9H9J4 1324 aaKnown RBP24.86■■□□□ 1.57
TRIM56-202ENST00000412507 COL15A1P39059 1388 aa24.85■■□□□ 1.57
TRIM56-202ENST00000412507 CHD4Q14839 1912 aa24.85■■□□□ 1.57
TRIM56-202ENST00000412507 MMP10P09238 476 aa24.85■■□□□ 1.57
TRIM56-202ENST00000412507 RUNDC1Q96C34 613 aa24.85■■□□□ 1.57
TRIM56-202ENST00000412507 RRP7AQ9Y3A4 280 aaKnown RBP24.84■■□□□ 1.57
TRIM56-202ENST00000412507 PRAMEF22A3QJZ6 481 aa24.83■■□□□ 1.57
TRIM56-202ENST00000412507 AFDNP55196 1824 aaKnown RBP24.83■■□□□ 1.57
TRIM56-202ENST00000412507 NEUROD2Q15784 382 aa24.82■■□□□ 1.56
TRIM56-202ENST00000412507 CCDC184Q52MB2 194 aa24.82■■□□□ 1.56
TRIM56-202ENST00000412507 USP16Q9Y5T5 823 aa24.82■■□□□ 1.56
TRIM56-202ENST00000412507 N4BP2Q86UW6 1770 aaPredicted RBP24.82■■□□□ 1.56
TRIM56-202ENST00000412507 ZPR1O75312 459 aa24.81■■□□□ 1.56
TRIM56-202ENST00000412507 FKBP8Q14318 412 aa24.81■■□□□ 1.56
TRIM56-202ENST00000412507 USPL1Q5W0Q7 1092 aa24.81■■□□□ 1.56
TRIM56-202ENST00000412507 PNISRQ8TF01 805 aaKnown RBP24.81■■□□□ 1.56
TRIM56-202ENST00000412507 CD2APQ9Y5K6 639 aa24.81■■□□□ 1.56
TRIM56-202ENST00000412507 ANP32CO43423 234 aa24.8■■□□□ 1.56
TRIM56-202ENST00000412507 A1BGP04217 495 aa24.8■■□□□ 1.56
TRIM56-202ENST00000412507 SNRPA1P09661 255 aaKnown RBP24.8■■□□□ 1.56
TRIM56-202ENST00000412507 SCN7AQ01118 1682 aa24.79■■□□□ 1.56
TRIM56-202ENST00000412507 KIAA1551Q9HCM1 1747 aa24.79■■□□□ 1.56
TRIM56-202ENST00000412507 EIF5P55010 431 aaKnown RBP24.79■■□□□ 1.56
TRIM56-202ENST00000412507 LMOD3Q0VAK6 560 aa24.79■■□□□ 1.56
TRIM56-202ENST00000412507 NARFQ9UHQ1 456 aa24.79■■□□□ 1.56
TRIM56-202ENST00000412507 BCORQ6W2J9 1755 aa24.79■■□□□ 1.56
TRIM56-202ENST00000412507 ZNF330Q9Y3S2 320 aaPredicted RBP24.78■■□□□ 1.56
TRIM56-202ENST00000412507 PARP3Q9Y6F1 533 aa24.77■■□□□ 1.56
TRIM56-202ENST00000412507 IL6STP40189 918 aaPredicted RBP24.76■■□□□ 1.55
TRIM56-202ENST00000412507 PIP4K2AP48426 406 aaPredicted RBP24.76■■□□□ 1.55
TRIM56-202ENST00000412507 GPR162Q16538 588 aa24.76■■□□□ 1.55
TRIM56-202ENST00000412507 PELP1Q8IZL8 1130 aaKnown RBP24.76■■□□□ 1.55
TRIM56-202ENST00000412507 A0A087WZG4 1122 aa24.75■■□□□ 1.55
TRIM56-202ENST00000412507 EIF4A1P60842 406 aaKnown RBP24.75■■□□□ 1.55
TRIM56-202ENST00000412507 TRIM35Q9UPQ4 493 aa24.75■■□□□ 1.55
TRIM56-202ENST00000412507 DDR1Q08345 913 aa24.74■■□□□ 1.55
TRIM56-202ENST00000412507 BCL2L12Q9HB09 334 aa24.74■■□□□ 1.55
TRIM56-202ENST00000412507 BRCA1P38398 1863 aaKnown RBP24.73■■□□□ 1.55
TRIM56-202ENST00000412507 NRXN2Q9P2S2 1712 aa24.73■■□□□ 1.55
TRIM56-202ENST00000412507 TM4SF1P30408 202 aa24.73■■□□□ 1.55
TRIM56-202ENST00000412507 TSPYL4Q9UJ04 414 aa24.73■■□□□ 1.55
TRIM56-202ENST00000412507 TBC1D2BQ9UPU7 963 aa24.73■■□□□ 1.55
TRIM56-202ENST00000412507 C10orf71Q711Q0 1435 aa24.72■■□□□ 1.55
TRIM56-202ENST00000412507 NPM2Q86SE8 214 aaKnown RBP24.72■■□□□ 1.55
TRIM56-202ENST00000412507 GIGYF1O75420 1035 aaPredicted RBP24.71■■□□□ 1.55
TRIM56-202ENST00000412507 NBPF26B4DH59 902 aa24.7■■□□□ 1.54
TRIM56-202ENST00000412507 POLRMTO00411 1230 aaKnown RBP24.7■■□□□ 1.54
TRIM56-202ENST00000412507 APAF1O14727 1248 aa24.7■■□□□ 1.54
TRIM56-202ENST00000412507 NBPF10Q6P3W6 841 aaKnown RBP24.7■■□□□ 1.54
TRIM56-202ENST00000412507 NBPF15Q8N660 670 aa24.7■■□□□ 1.54
TRIM56-202ENST00000412507 MRS2Q9HD23 443 aa24.7■■□□□ 1.54
TRIM56-202ENST00000412507 NUP98P52948 1817 aa24.7■■□□□ 1.54
TRIM56-202ENST00000412507 UTRNP46939 3433 aa24.69■■□□□ 1.54
TRIM56-202ENST00000412507 YBX3P16989 372 aaKnown RBP eCLIP24.69■■□□□ 1.54
TRIM56-202ENST00000412507 NFIXQ14938 502 aa24.69■■□□□ 1.54
TRIM56-202ENST00000412507 BABAM1Q9NWV8 329 aa24.69■■□□□ 1.54
TRIM56-202ENST00000412507 GOLGB1Q14789 3259 aaKnown RBP24.69■■□□□ 1.54
TRIM56-202ENST00000412507 DZIP3Q86Y13 1208 aaKnown RBP24.68■■□□□ 1.54
TRIM56-202ENST00000412507 WWC3Q9ULE0 1092 aa24.68■■□□□ 1.54
TRIM56-202ENST00000412507 LAS1LQ9Y4W2 734 aaKnown RBP24.68■■□□□ 1.54
TRIM56-202ENST00000412507 PXDNLA1KZ92 1463 aa24.68■■□□□ 1.54
TRIM56-202ENST00000412507 BICDL1Q6ZP65 573 aa24.67■■□□□ 1.54
TRIM56-202ENST00000412507 CAMTA2O94983 1202 aa24.66■■□□□ 1.54
TRIM56-202ENST00000412507 YY1P25490 414 aa24.65■■□□□ 1.54
TRIM56-202ENST00000412507 TGFB2P61812 414 aa24.65■■□□□ 1.54
TRIM56-202ENST00000412507 TBC1D9BQ66K14 1250 aa24.65■■□□□ 1.54
TRIM56-202ENST00000412507 ANKRD31Q8N7Z5 1873 aa24.65■■□□□ 1.54
TRIM56-202ENST00000412507 A0A0G2JLW4 131 aa24.64■■□□□ 1.54
TRIM56-202ENST00000412507 CHL1O00533 1208 aa24.64■■□□□ 1.54
TRIM56-202ENST00000412507 ARFGEF1Q9Y6D6 1849 aa24.63■■□□□ 1.53
TRIM56-202ENST00000412507 DLEC1Q9Y238 1755 aa24.63■■□□□ 1.53
TRIM56-202ENST00000412507 SERPINB2P05120 415 aa24.63■■□□□ 1.53
TRIM56-202ENST00000412507 SENP3-EIF4A1A0A087X0R7 540 aa24.61■■□□□ 1.53
TRIM56-202ENST00000412507 GRIN3BO60391 1043 aa24.61■■□□□ 1.53
TRIM56-202ENST00000412507 DPEP1P16444 411 aa24.61■■□□□ 1.53
TRIM56-202ENST00000412507 NGEFQ8N5V2 710 aa24.61■■□□□ 1.53
TRIM56-202ENST00000412507 MYL6BP14649 208 aa24.6■■□□□ 1.53
TRIM56-202ENST00000412507 EIF2S2P20042 333 aaKnown RBP24.6■■□□□ 1.53
TRIM56-202ENST00000412507 KRT24Q2M2I5 525 aa24.59■■□□□ 1.53
TRIM56-202ENST00000412507 CFAP44Q96MT7 982 aa24.59■■□□□ 1.53
TRIM56-202ENST00000412507 CACNA1SQ13698 1873 aa24.58■■□□□ 1.53
TRIM56-202ENST00000412507 CARMIL3Q8ND23 1372 aa24.57■■□□□ 1.52
TRIM56-202ENST00000412507 CLEC4GQ6UXB4 293 aa24.57■■□□□ 1.52
TRIM56-202ENST00000412507 SETDB2Q96T68 719 aa24.57■■□□□ 1.52
TRIM56-202ENST00000412507 ERBB4Q15303 1308 aa24.57■■□□□ 1.52
TRIM56-202ENST00000412507 KCNA3P22001 575 aa24.56■■□□□ 1.52
TRIM56-202ENST00000412507 CHRNA5P30532 468 aa24.56■■□□□ 1.52
TRIM56-202ENST00000412507 NECTIN2Q92692 538 aa24.56■■□□□ 1.52
TRIM56-202ENST00000412507 MBIPQ9NS73 344 aa24.56■■□□□ 1.52
TRIM56-202ENST00000412507 ZNF652Q9Y2D9 606 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms