RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 SH2D4BQ5SQS7 431 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 PDRG1Q9NUG6 133 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 CPSF2Q9P2I0 782 aaKnown RBP8.52□□□□□ -1.05
PTPN3-203ENST00000412145 ATP2A2P16615 1042 aaKnown RBP8.52□□□□□ -1.05
PTPN3-203ENST00000412145 ATP5DP30049 168 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 NBPF1Q3BBV0 1214 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 SPC24Q8NBT2 197 aa8.52□□□□□ -1.05
PTPN3-203ENST00000412145 KIF4BQ2VIQ3 1234 aa8.51□□□□□ -1.05
PTPN3-203ENST00000412145 RSRC1Q96IZ7 334 aaKnown RBP8.51□□□□□ -1.05
PTPN3-203ENST00000412145 RBM28Q9NW13 759 aaKnown RBP8.51□□□□□ -1.05
PTPN3-203ENST00000412145 RPAP2Q8IXW5 612 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-203ENST00000412145 CUL5Q93034 780 aa8.51□□□□□ -1.05
PTPN3-203ENST00000412145 MATR3P43243 847 aaKnown RBP eCLIP8.51□□□□□ -1.05
PTPN3-203ENST00000412145 NUTM2GQ5VZR2 741 aa8.51□□□□□ -1.05
PTPN3-203ENST00000412145 SELENOOQ9BVL4 669 aa8.51□□□□□ -1.05
PTPN3-203ENST00000412145 CCDC94Q9BW85 323 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-203ENST00000412145 ELL2O00472 640 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-203ENST00000412145 KRT222Q8N1A0 295 aa8.51□□□□□ -1.05
PTPN3-203ENST00000412145 STRN4Q9NRL3 753 aa8.51□□□□□ -1.05
PTPN3-203ENST00000412145 MSANTD4Q8NCY6 345 aa8.51□□□□□ -1.05
PTPN3-203ENST00000412145 CNNM1Q9NRU3 951 aa8.51□□□□□ -1.05
PTPN3-203ENST00000412145 EIF3DO15371 548 aaKnown RBP eCLIP8.51□□□□□ -1.05
PTPN3-203ENST00000412145 TUBB2AQ13885 445 aa8.51□□□□□ -1.05
PTPN3-203ENST00000412145 TUBB2BQ9BVA1 445 aa8.51□□□□□ -1.05
PTPN3-203ENST00000412145 GMNNO75496 209 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 MNAT1P51948 309 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 IFT74Q96LB3 600 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 BCL2L13Q9BXK5 485 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 COMMD10Q9Y6G5 202 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 ABCC11Q96J66 1382 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 BAG4O95429 457 aaKnown RBP8.5□□□□□ -1.05
PTPN3-203ENST00000412145 RNF187Q5TA31 235 aaPredicted RBP8.5□□□□□ -1.05
PTPN3-203ENST00000412145 AFAP1Q8N556 730 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 KIAA0753Q2KHM9 967 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 CTCFLQ8NI51 663 aaPredicted RBP8.5□□□□□ -1.05
PTPN3-203ENST00000412145 A0A1B0GUA9 196 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 STMN1P16949 149 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.5□□□□□ -1.05
PTPN3-203ENST00000412145 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.5□□□□□ -1.05
PTPN3-203ENST00000412145 KIF5AQ12840 1032 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 CCDC113Q9H0I3 377 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 BCCIPQ9P287 314 aaKnown RBP eCLIP8.5□□□□□ -1.05
PTPN3-203ENST00000412145 NCAPGQ9BPX3 1015 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 ZNF692Q9BU19 519 aaPredicted RBP8.5□□□□□ -1.05
PTPN3-203ENST00000412145 HDAC9Q9UKV0 1011 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 KIF5BP33176 963 aa8.5□□□□□ -1.05
PTPN3-203ENST00000412145 ATF7IPQ6VMQ6 1270 aa8.49□□□□□ -1.05
PTPN3-203ENST00000412145 TBC1D5Q92609 795 aa8.49□□□□□ -1.05
PTPN3-203ENST00000412145 MAP7D1Q3KQU3 841 aa8.49□□□□□ -1.05
PTPN3-203ENST00000412145 ZHX3Q9H4I2 956 aa8.49□□□□□ -1.05
PTPN3-203ENST00000412145 LUC7L2Q9Y383 392 aaKnown RBP8.49□□□□□ -1.05
PTPN3-203ENST00000412145 HS1BP3Q53T59 392 aa8.49□□□□□ -1.05
PTPN3-203ENST00000412145 NUP88Q99567 741 aaPredicted RBP8.49□□□□□ -1.05
PTPN3-203ENST00000412145 BCAP29Q9UHQ4 241 aa8.49□□□□□ -1.05
PTPN3-203ENST00000412145 VCXQ9H320 206 aa8.49□□□□□ -1.05
PTPN3-203ENST00000412145 MCM4P33991 863 aa8.49□□□□□ -1.05
PTPN3-203ENST00000412145 RAB3IPQ96QF0 476 aaPredicted RBP8.49□□□□□ -1.05
PTPN3-203ENST00000412145 MPHOSPH8Q99549 860 aa8.49□□□□□ -1.05
PTPN3-203ENST00000412145 VCX3BQ9H321 246 aa8.49□□□□□ -1.05
PTPN3-203ENST00000412145 HAUS2Q9NVX0 235 aa8.49□□□□□ -1.05
PTPN3-203ENST00000412145 FGD5Q6ZNL6 1462 aa8.49□□□□□ -1.05
PTPN3-203ENST00000412145 ESCO1Q5FWF5 840 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 TICAM2Q86XR7 235 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 ERMNQ8TAM6 284 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 SPG7Q9UQ90 795 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 TDO2P48775 406 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 PPFIBP2Q8ND30 876 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 SLC4A3P48751 1232 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 UBE4AQ14139 1066 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 CALML4Q96GE6 196 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 GOPCQ9HD26 462 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 ARFGAP3Q9NP61 516 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 NLRP2Q9NX02 1062 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 SETDB1Q15047 1291 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 AFAP1L2Q8N4X5 818 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 RBM27Q9P2N5 1060 aaKnown RBP8.48□□□□□ -1.05
PTPN3-203ENST00000412145 PPP1R1BQ9UD71 204 aaPredicted RBP8.48□□□□□ -1.05
PTPN3-203ENST00000412145 ZNF652Q9Y2D9 606 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 GLRX3O76003 335 aaKnown RBP8.48□□□□□ -1.05
PTPN3-203ENST00000412145 APBB1IPQ7Z5R6 666 aaPredicted RBP8.48□□□□□ -1.05
PTPN3-203ENST00000412145 HMG20BQ9P0W2 317 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 SMARCA4P51532 1647 aa8.48□□□□□ -1.05
PTPN3-203ENST00000412145 A0A1W2PRG0 241 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 ERICH4A6NGS2 130 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 CACNA2D3Q8IZS8 1091 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 THEMISQ8N1K5 641 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-203ENST00000412145 CYLC1P35663 651 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-203ENST00000412145 GTF2A1P52655 376 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-203ENST00000412145 TRPC3Q13507 836 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 B4GALNT4Q76KP1 1039 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 BCL11BQ9C0K0 894 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-203ENST00000412145 CCDC82Q8N4S0 544 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 NECTIN2Q92692 538 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 DRC1Q96MC2 740 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 PAIP2Q9BPZ3 127 aaKnown RBP8.47□□□□□ -1.05
PTPN3-203ENST00000412145 TCP11L1Q9NUJ3 509 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 ZNF644Q9H582 1327 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-203ENST00000412145 HLTFQ14527 1009 aaKnown RBP eCLIP8.47□□□□□ -1.05
PTPN3-203ENST00000412145 CCDC121Q6ZUS5 278 aa8.47□□□□□ -1.05
PTPN3-203ENST00000412145 ARHGAP24Q8N264 748 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms