RNA–Protein interactions for RNA: ENST00000411706.1

KLF4-202, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-202ENST00000411706 BABAM1Q9NWV8 329 aa25.2■■□□□ 1.62
KLF4-202ENST00000411706 SNRPA1P09661 255 aaKnown RBP25.19■■□□□ 1.62
KLF4-202ENST00000411706 ARHGEF1Q92888 912 aaKnown RBP25.19■■□□□ 1.62
KLF4-202ENST00000411706 C4AP0C0L4 1744 aa25.19■■□□□ 1.62
KLF4-202ENST00000411706 SMIM5Q71RC9 77 aa25.18■■□□□ 1.62
KLF4-202ENST00000411706 APAF1O14727 1248 aa25.17■■□□□ 1.62
KLF4-202ENST00000411706 MIS18AQ9NYP9 233 aa25.17■■□□□ 1.62
KLF4-202ENST00000411706 TRIM35Q9UPQ4 493 aa25.16■■□□□ 1.62
KLF4-202ENST00000411706 SOS1Q07889 1333 aaPredicted RBP25.15■■□□□ 1.62
KLF4-202ENST00000411706 MSL1Q68DK7 614 aa25.15■■□□□ 1.62
KLF4-202ENST00000411706 NLGN1Q8N2Q7 840 aa25.15■■□□□ 1.62
KLF4-202ENST00000411706 TSPYL4Q9UJ04 414 aa25.15■■□□□ 1.62
KLF4-202ENST00000411706 ZBTB1Q9Y2K1 713 aa25.15■■□□□ 1.62
KLF4-202ENST00000411706 CANXP27824 592 aaKnown RBP25.13■■□□□ 1.61
KLF4-202ENST00000411706 NPM2Q86SE8 214 aaKnown RBP25.13■■□□□ 1.61
KLF4-202ENST00000411706 LAMB4A4D0S4 1761 aa25.13■■□□□ 1.61
KLF4-202ENST00000411706 A0A087WZG4 1122 aa25.12■■□□□ 1.61
KLF4-202ENST00000411706 EIF4A1P60842 406 aaKnown RBP25.12■■□□□ 1.61
KLF4-202ENST00000411706 CALD1Q05682 793 aaKnown RBP25.12■■□□□ 1.61
KLF4-202ENST00000411706 USP16Q9Y5T5 823 aa25.12■■□□□ 1.61
KLF4-202ENST00000411706 COL15A1P39059 1388 aa25.12■■□□□ 1.61
KLF4-202ENST00000411706 ZPR1O75312 459 aa25.11■■□□□ 1.61
KLF4-202ENST00000411706 IL6STP40189 918 aaPredicted RBP25.11■■□□□ 1.61
KLF4-202ENST00000411706 EIF5P55010 431 aaKnown RBP25.1■■□□□ 1.61
KLF4-202ENST00000411706 FHDC1Q9C0D6 1143 aaPredicted RBP25.1■■□□□ 1.61
KLF4-202ENST00000411706 USP42Q9H9J4 1324 aaKnown RBP25.1■■□□□ 1.61
KLF4-202ENST00000411706 GIGYF1O75420 1035 aaPredicted RBP25.09■■□□□ 1.61
KLF4-202ENST00000411706 A1BGP04217 495 aa25.09■■□□□ 1.61
KLF4-202ENST00000411706 GYS1P13807 737 aa25.09■■□□□ 1.61
KLF4-202ENST00000411706 NCBP3Q53F19 620 aaKnown RBP25.09■■□□□ 1.61
KLF4-202ENST00000411706 SYT17Q9BSW7 474 aa25.09■■□□□ 1.61
KLF4-202ENST00000411706 NARFQ9UHQ1 456 aa25.09■■□□□ 1.61
KLF4-202ENST00000411706 CHL1O00533 1208 aa25.08■■□□□ 1.61
KLF4-202ENST00000411706 PRAMEF22A3QJZ6 481 aa25.07■■□□□ 1.6
KLF4-202ENST00000411706 CFAP44Q96MT7 982 aa25.07■■□□□ 1.6
KLF4-202ENST00000411706 CCDC27Q2M243 656 aa25.06■■□□□ 1.6
KLF4-202ENST00000411706 LAS1LQ9Y4W2 734 aaKnown RBP25.06■■□□□ 1.6
KLF4-202ENST00000411706 FAM9BQ8IZU0 186 aa25.05■■□□□ 1.6
KLF4-202ENST00000411706 SRP68Q9UHB9 627 aaKnown RBP25.05■■□□□ 1.6
KLF4-202ENST00000411706 DCAF8L1A6NGE4 600 aa25.04■■□□□ 1.6
KLF4-202ENST00000411706 MMP10P09238 476 aa25.04■■□□□ 1.6
KLF4-202ENST00000411706 USPL1Q5W0Q7 1092 aa25.04■■□□□ 1.6
KLF4-202ENST00000411706 KLHL34Q8N239 644 aa25.04■■□□□ 1.6
KLF4-202ENST00000411706 ZNF330Q9Y3S2 320 aaPredicted RBP25.04■■□□□ 1.6
KLF4-202ENST00000411706 GNAI1P63096 354 aa25.03■■□□□ 1.6
KLF4-202ENST00000411706 CD2APQ9Y5K6 639 aa25.03■■□□□ 1.6
KLF4-202ENST00000411706 CCER2I3L3R5 266 aa25.02■■□□□ 1.6
KLF4-202ENST00000411706 IFT57Q9NWB7 429 aa25.02■■□□□ 1.6
KLF4-202ENST00000411706 PARP3Q9Y6F1 533 aa25.02■■□□□ 1.6
KLF4-202ENST00000411706 FKBP8Q14318 412 aa25.01■■□□□ 1.59
KLF4-202ENST00000411706 ZNF853P0CG23 659 aa25■■□□□ 1.59
KLF4-202ENST00000411706 NGEFQ8N5V2 710 aa25■■□□□ 1.59
KLF4-202ENST00000411706 ERBB4Q15303 1308 aa25■■□□□ 1.59
KLF4-202ENST00000411706 SCN7AQ01118 1682 aa24.99■■□□□ 1.59
KLF4-202ENST00000411706 DIEXFQ68CQ4 756 aaKnown RBP24.99■■□□□ 1.59
KLF4-202ENST00000411706 NBPF26B4DH59 902 aa24.98■■□□□ 1.59
KLF4-202ENST00000411706 NBPF10Q6P3W6 841 aaKnown RBP24.98■■□□□ 1.59
KLF4-202ENST00000411706 DZIP3Q86Y13 1208 aaKnown RBP24.98■■□□□ 1.59
KLF4-202ENST00000411706 WWC1Q8IX03 1113 aa24.98■■□□□ 1.59
KLF4-202ENST00000411706 NBPF15Q8N660 670 aa24.98■■□□□ 1.59
KLF4-202ENST00000411706 TBC1D2BQ9UPU7 963 aa24.98■■□□□ 1.59
KLF4-202ENST00000411706 KIF13BQ9NQT8 1826 aa24.98■■□□□ 1.59
KLF4-202ENST00000411706 BCORQ6W2J9 1755 aa24.98■■□□□ 1.59
KLF4-202ENST00000411706 HOXB7P09629 217 aa24.97■■□□□ 1.59
KLF4-202ENST00000411706 TM4SF1P30408 202 aa24.97■■□□□ 1.59
KLF4-202ENST00000411706 MBIPQ9NS73 344 aa24.97■■□□□ 1.59
KLF4-202ENST00000411706 PIP4K2AP48426 406 aaPredicted RBP24.96■■□□□ 1.59
KLF4-202ENST00000411706 BCL2L12Q9HB09 334 aa24.96■■□□□ 1.59
KLF4-202ENST00000411706 RGL2O15211 777 aa24.95■■□□□ 1.58
KLF4-202ENST00000411706 EIF2S2P20042 333 aaKnown RBP24.94■■□□□ 1.58
KLF4-202ENST00000411706 CLEC4GQ6UXB4 293 aa24.94■■□□□ 1.58
KLF4-202ENST00000411706 ZNF652Q9Y2D9 606 aa24.94■■□□□ 1.58
KLF4-202ENST00000411706 AFDNP55196 1824 aaKnown RBP24.93■■□□□ 1.58
KLF4-202ENST00000411706 IL16Q14005 1332 aa24.93■■□□□ 1.58
KLF4-202ENST00000411706 CAMTA2O94983 1202 aa24.93■■□□□ 1.58
KLF4-202ENST00000411706 NFIXQ14938 502 aa24.93■■□□□ 1.58
KLF4-202ENST00000411706 POLRMTO00411 1230 aaKnown RBP24.92■■□□□ 1.58
KLF4-202ENST00000411706 WDR63Q8IWG1 891 aa24.92■■□□□ 1.58
KLF4-202ENST00000411706 CHMP4AQ9BY43 222 aa24.92■■□□□ 1.58
KLF4-202ENST00000411706 MYL6BP14649 208 aa24.91■■□□□ 1.58
KLF4-202ENST00000411706 DDR1Q08345 913 aa24.91■■□□□ 1.58
KLF4-202ENST00000411706 NLGN2Q8NFZ4 835 aa24.91■■□□□ 1.58
KLF4-202ENST00000411706 NRXN2Q9P2S2 1712 aa24.9■■□□□ 1.58
KLF4-202ENST00000411706 TGFB2P61812 414 aa24.9■■□□□ 1.58
KLF4-202ENST00000411706 DUSP27Q5VZP5 1158 aa24.9■■□□□ 1.58
KLF4-202ENST00000411706 NUP98P52948 1817 aa24.89■■□□□ 1.58
KLF4-202ENST00000411706 C10orf71Q711Q0 1435 aa24.89■■□□□ 1.58
KLF4-202ENST00000411706 SENP3-EIF4A1A0A087X0R7 540 aa24.89■■□□□ 1.58
KLF4-202ENST00000411706 KRT24Q2M2I5 525 aa24.89■■□□□ 1.58
KLF4-202ENST00000411706 KIF6Q6ZMV9 814 aa24.89■■□□□ 1.58
KLF4-202ENST00000411706 SETDB2Q96T68 719 aa24.89■■□□□ 1.58
KLF4-202ENST00000411706 SALL2Q9Y467 1007 aaPredicted RBP24.89■■□□□ 1.58
KLF4-202ENST00000411706 ERVV-1B6SEH8 477 aa24.88■■□□□ 1.57
KLF4-202ENST00000411706 SERPINB2P05120 415 aa24.88■■□□□ 1.57
KLF4-202ENST00000411706 HDGFL1Q5TGJ6 251 aa24.88■■□□□ 1.57
KLF4-202ENST00000411706 TBC1D9BQ66K14 1250 aa24.88■■□□□ 1.57
KLF4-202ENST00000411706 BICDL1Q6ZP65 573 aa24.88■■□□□ 1.57
KLF4-202ENST00000411706 PDIA6Q15084 440 aa24.87■■□□□ 1.57
KLF4-202ENST00000411706 DDX21Q9NR30 783 aaKnown RBP eCLIP24.87■■□□□ 1.57
KLF4-202ENST00000411706 CARMIL3Q8ND23 1372 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms