RNA–Protein interactions for RNA: ENST00000411466.6

SRCAP-203, Transcript of Snf2 related CREBBP activator protein, humanhuman

TSL 3

Gene SRCAP, Length 836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRCAP-203ENST00000411466 POLD1P28340 1107 aa29.14■■■□□ 2.26
SRCAP-203ENST00000411466 MSL1Q68DK7 614 aa29.14■■■□□ 2.26
SRCAP-203ENST00000411466 COL24A1Q17RW2 1714 aa29.14■■■□□ 2.25
SRCAP-203ENST00000411466 SNRPA1P09661 255 aaKnown RBP29.13■■■□□ 2.25
SRCAP-203ENST00000411466 RFC4P35249 363 aa29.12■■■□□ 2.25
SRCAP-203ENST00000411466 ARXQ96QS3 562 aa29.12■■■□□ 2.25
SRCAP-203ENST00000411466 BABAM1Q9NWV8 329 aa29.12■■■□□ 2.25
SRCAP-203ENST00000411466 ZBTB1Q9Y2K1 713 aa29.12■■■□□ 2.25
SRCAP-203ENST00000411466 SOS1Q07889 1333 aaPredicted RBP29.11■■■□□ 2.25
SRCAP-203ENST00000411466 KDM3BQ7LBC6 1761 aa29.11■■■□□ 2.25
SRCAP-203ENST00000411466 TSPYL4Q9UJ04 414 aa29.1■■■□□ 2.25
SRCAP-203ENST00000411466 PRAMEF22A3QJZ6 481 aa29.09■■■□□ 2.25
SRCAP-203ENST00000411466 EIF4A1P60842 406 aaKnown RBP29.09■■■□□ 2.25
SRCAP-203ENST00000411466 USP16Q9Y5T5 823 aa29.09■■■□□ 2.25
SRCAP-203ENST00000411466 CANXP27824 592 aaKnown RBP29.08■■■□□ 2.25
SRCAP-203ENST00000411466 COL15A1P39059 1388 aa29.05■■■□□ 2.24
SRCAP-203ENST00000411466 USP42Q9H9J4 1324 aaKnown RBP29.05■■■□□ 2.24
SRCAP-203ENST00000411466 CHL1O00533 1208 aa29.05■■■□□ 2.24
SRCAP-203ENST00000411466 A1BGP04217 495 aa29.05■■■□□ 2.24
SRCAP-203ENST00000411466 GYS1P13807 737 aa29.05■■■□□ 2.24
SRCAP-203ENST00000411466 NLGN1Q8N2Q7 840 aa29.05■■■□□ 2.24
SRCAP-203ENST00000411466 C4AP0C0L4 1744 aa29.04■■■□□ 2.24
SRCAP-203ENST00000411466 GIGYF1O75420 1035 aaPredicted RBP29.04■■■□□ 2.24
SRCAP-203ENST00000411466 EIF5P55010 431 aaKnown RBP29.04■■■□□ 2.24
SRCAP-203ENST00000411466 FAM9BQ8IZU0 186 aa29.04■■■□□ 2.24
SRCAP-203ENST00000411466 FHDC1Q9C0D6 1143 aaPredicted RBP29.04■■■□□ 2.24
SRCAP-203ENST00000411466 SRP68Q9UHB9 627 aaKnown RBP29.04■■■□□ 2.24
SRCAP-203ENST00000411466 IL6STP40189 918 aaPredicted RBP29.03■■■□□ 2.24
SRCAP-203ENST00000411466 CALD1Q05682 793 aaKnown RBP29.02■■■□□ 2.24
SRCAP-203ENST00000411466 LAS1LQ9Y4W2 734 aaKnown RBP29.02■■■□□ 2.24
SRCAP-203ENST00000411466 ZPR1O75312 459 aa29.01■■■□□ 2.23
SRCAP-203ENST00000411466 A0A087WZG4 1122 aa29■■■□□ 2.23
SRCAP-203ENST00000411466 CFAP44Q96MT7 982 aa29■■■□□ 2.23
SRCAP-203ENST00000411466 NARFQ9UHQ1 456 aa29■■■□□ 2.23
SRCAP-203ENST00000411466 MMP10P09238 476 aa28.99■■■□□ 2.23
SRCAP-203ENST00000411466 CCDC27Q2M243 656 aa28.99■■■□□ 2.23
SRCAP-203ENST00000411466 USPL1Q5W0Q7 1092 aa28.99■■■□□ 2.23
SRCAP-203ENST00000411466 SYT17Q9BSW7 474 aa28.99■■■□□ 2.23
SRCAP-203ENST00000411466 SENP3-EIF4A1A0A087X0R7 540 aa28.98■■■□□ 2.23
SRCAP-203ENST00000411466 NCBP3Q53F19 620 aaKnown RBP28.98■■■□□ 2.23
SRCAP-203ENST00000411466 DIEXFQ68CQ4 756 aaKnown RBP28.98■■■□□ 2.23
SRCAP-203ENST00000411466 ZNF330Q9Y3S2 320 aaPredicted RBP28.98■■■□□ 2.23
SRCAP-203ENST00000411466 PIP4K2AP48426 406 aaPredicted RBP28.97■■■□□ 2.23
SRCAP-203ENST00000411466 FKBP8Q14318 412 aa28.97■■■□□ 2.23
SRCAP-203ENST00000411466 NPM2Q86SE8 214 aaKnown RBP28.97■■■□□ 2.23
SRCAP-203ENST00000411466 NBPF26B4DH59 902 aa28.96■■■□□ 2.23
SRCAP-203ENST00000411466 CCER2I3L3R5 266 aa28.96■■■□□ 2.23
SRCAP-203ENST00000411466 ZNF853P0CG23 659 aa28.96■■■□□ 2.23
SRCAP-203ENST00000411466 NBPF10Q6P3W6 841 aaKnown RBP28.96■■■□□ 2.23
SRCAP-203ENST00000411466 NBPF15Q8N660 670 aa28.96■■■□□ 2.23
SRCAP-203ENST00000411466 IFT57Q9NWB7 429 aa28.96■■■□□ 2.23
SRCAP-203ENST00000411466 LAMB4A4D0S4 1761 aa28.96■■■□□ 2.23
SRCAP-203ENST00000411466 KLHL34Q8N239 644 aa28.95■■■□□ 2.22
SRCAP-203ENST00000411466 GNAI1P63096 354 aa28.94■■■□□ 2.22
SRCAP-203ENST00000411466 WWC1Q8IX03 1113 aa28.94■■■□□ 2.22
SRCAP-203ENST00000411466 MBIPQ9NS73 344 aa28.93■■■□□ 2.22
SRCAP-203ENST00000411466 TBC1D2BQ9UPU7 963 aa28.93■■■□□ 2.22
SRCAP-203ENST00000411466 BCL2L12Q9HB09 334 aa28.92■■■□□ 2.22
SRCAP-203ENST00000411466 CD2APQ9Y5K6 639 aa28.91■■■□□ 2.22
SRCAP-203ENST00000411466 TM4SF1P30408 202 aa28.9■■■□□ 2.22
SRCAP-203ENST00000411466 KRT24Q2M2I5 525 aa28.9■■■□□ 2.22
SRCAP-203ENST00000411466 DZIP3Q86Y13 1208 aaKnown RBP28.9■■■□□ 2.22
SRCAP-203ENST00000411466 PARP3Q9Y6F1 533 aa28.9■■■□□ 2.22
SRCAP-203ENST00000411466 ERBB4Q15303 1308 aa28.89■■■□□ 2.21
SRCAP-203ENST00000411466 CAMTA2O94983 1202 aa28.88■■■□□ 2.21
SRCAP-203ENST00000411466 DDR1Q08345 913 aa28.88■■■□□ 2.21
SRCAP-203ENST00000411466 SALL2Q9Y467 1007 aaPredicted RBP28.88■■■□□ 2.21
SRCAP-203ENST00000411466 EIF2S2P20042 333 aaKnown RBP28.87■■■□□ 2.21
SRCAP-203ENST00000411466 GOLGB1Q14789 3259 aaKnown RBP28.87■■■□□ 2.21
SRCAP-203ENST00000411466 HOXB7P09629 217 aa28.86■■■□□ 2.21
SRCAP-203ENST00000411466 NFIXQ14938 502 aa28.86■■■□□ 2.21
SRCAP-203ENST00000411466 NGEFQ8N5V2 710 aa28.86■■■□□ 2.21
SRCAP-203ENST00000411466 NLGN2Q8NFZ4 835 aa28.86■■■□□ 2.21
SRCAP-203ENST00000411466 IL16Q14005 1332 aa28.86■■■□□ 2.21
SRCAP-203ENST00000411466 MYL6BP14649 208 aa28.85■■■□□ 2.21
SRCAP-203ENST00000411466 SCN7AQ01118 1682 aa28.85■■■□□ 2.21
SRCAP-203ENST00000411466 POLRMTO00411 1230 aaKnown RBP28.84■■■□□ 2.21
SRCAP-203ENST00000411466 MIER1Q8N108 512 aa28.84■■■□□ 2.21
SRCAP-203ENST00000411466 PDIA6Q15084 440 aa28.83■■■□□ 2.21
SRCAP-203ENST00000411466 WDR63Q8IWG1 891 aa28.83■■■□□ 2.21
SRCAP-203ENST00000411466 DUSP27Q5VZP5 1158 aa28.82■■■□□ 2.2
SRCAP-203ENST00000411466 TBC1D9BQ66K14 1250 aa28.82■■■□□ 2.2
SRCAP-203ENST00000411466 NECTIN2Q92692 538 aa28.82■■■□□ 2.2
SRCAP-203ENST00000411466 C10orf71Q711Q0 1435 aa28.81■■■□□ 2.2
SRCAP-203ENST00000411466 RGL2O15211 777 aa28.81■■■□□ 2.2
SRCAP-203ENST00000411466 CLEC4GQ6UXB4 293 aa28.81■■■□□ 2.2
SRCAP-203ENST00000411466 TSR2Q969E8 191 aaKnown RBP28.81■■■□□ 2.2
SRCAP-203ENST00000411466 DCAF8L1A6NGE4 600 aa28.8■■■□□ 2.2
SRCAP-203ENST00000411466 HDGFL1Q5TGJ6 251 aa28.8■■■□□ 2.2
SRCAP-203ENST00000411466 BICDL1Q6ZP65 573 aa28.8■■■□□ 2.2
SRCAP-203ENST00000411466 LRP10Q7Z4F1 713 aa28.8■■■□□ 2.2
SRCAP-203ENST00000411466 ZNF652Q9Y2D9 606 aa28.8■■■□□ 2.2
SRCAP-203ENST00000411466 BCORQ6W2J9 1755 aa28.79■■■□□ 2.2
SRCAP-203ENST00000411466 PROSER3Q2NL68 480 aa28.78■■■□□ 2.2
SRCAP-203ENST00000411466 C8orf58Q8NAV2 365 aa28.78■■■□□ 2.2
SRCAP-203ENST00000411466 DDX21Q9NR30 783 aaKnown RBP eCLIP28.78■■■□□ 2.2
SRCAP-203ENST00000411466 UTRNP46939 3433 aa28.78■■■□□ 2.2
SRCAP-203ENST00000411466 SERPINB2P05120 415 aa28.77■■■□□ 2.2
SRCAP-203ENST00000411466 KIF6Q6ZMV9 814 aa28.77■■■□□ 2.2
SRCAP-203ENST00000411466 TTLL7Q6ZT98 887 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms