RNA–Protein interactions for RNA: ENST00000409295.5

COPS7B-205, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-205ENST00000409295 KLHL34Q8N239 644 aa18.82■□□□□ 0.6
COPS7B-205ENST00000409295 KCPQ6ZWJ8 1503 aa18.82■□□□□ 0.6
COPS7B-205ENST00000409295 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
COPS7B-205ENST00000409295 FHDC1Q9C0D6 1143 aaPredicted RBP18.81■□□□□ 0.6
COPS7B-205ENST00000409295 LAS1LQ9Y4W2 734 aaKnown RBP18.81■□□□□ 0.6
COPS7B-205ENST00000409295 SRCAPQ6ZRS2 3230 aa18.81■□□□□ 0.6
COPS7B-205ENST00000409295 TRIM35Q9UPQ4 493 aa18.8■□□□□ 0.6
COPS7B-205ENST00000409295 ZBTB1Q9Y2K1 713 aa18.8■□□□□ 0.6
COPS7B-205ENST00000409295 USP16Q9Y5T5 823 aa18.8■□□□□ 0.6
COPS7B-205ENST00000409295 VIRMAQ69YN4 1812 aaKnown RBP18.79■□□□□ 0.6
COPS7B-205ENST00000409295 SOS1Q07889 1333 aaPredicted RBP18.79■□□□□ 0.6
COPS7B-205ENST00000409295 A1BGP04217 495 aa18.79■□□□□ 0.6
COPS7B-205ENST00000409295 EIF4A1P60842 406 aaKnown RBP18.79■□□□□ 0.6
COPS7B-205ENST00000409295 SYT17Q9BSW7 474 aa18.79■□□□□ 0.6
COPS7B-205ENST00000409295 ZNF330Q9Y3S2 320 aaPredicted RBP18.78■□□□□ 0.6
COPS7B-205ENST00000409295 GYS1P13807 737 aa18.77■□□□□ 0.6
COPS7B-205ENST00000409295 IL6STP40189 918 aaPredicted RBP18.77■□□□□ 0.6
COPS7B-205ENST00000409295 EIF5P55010 431 aaKnown RBP18.77■□□□□ 0.6
COPS7B-205ENST00000409295 FAM9BQ8IZU0 186 aa18.77■□□□□ 0.6
COPS7B-205ENST00000409295 NARFQ9UHQ1 456 aa18.77■□□□□ 0.6
COPS7B-205ENST00000409295 TUBGCP6Q96RT7 1819 aa18.77■□□□□ 0.59
COPS7B-205ENST00000409295 UBR3Q6ZT12 1888 aa18.76■□□□□ 0.59
COPS7B-205ENST00000409295 GIGYF1O75420 1035 aaPredicted RBP18.76■□□□□ 0.59
COPS7B-205ENST00000409295 MMP10P09238 476 aa18.76■□□□□ 0.59
COPS7B-205ENST00000409295 SRP68Q9UHB9 627 aaKnown RBP18.76■□□□□ 0.59
COPS7B-205ENST00000409295 PARP3Q9Y6F1 533 aa18.76■□□□□ 0.59
COPS7B-205ENST00000409295 SIPA1L3O60292 1781 aaPredicted RBP18.76■□□□□ 0.59
COPS7B-205ENST00000409295 USP42Q9H9J4 1324 aaKnown RBP18.75■□□□□ 0.59
COPS7B-205ENST00000409295 PRAMEF22A3QJZ6 481 aa18.75■□□□□ 0.59
COPS7B-205ENST00000409295 CHL1O00533 1208 aa18.75■□□□□ 0.59
COPS7B-205ENST00000409295 USPL1Q5W0Q7 1092 aa18.75■□□□□ 0.59
COPS7B-205ENST00000409295 COL5A3P25940 1745 aaPredicted RBP18.74■□□□□ 0.59
COPS7B-205ENST00000409295 TJP1Q07157 1748 aa18.74■□□□□ 0.59
COPS7B-205ENST00000409295 COL15A1P39059 1388 aa18.74■□□□□ 0.59
COPS7B-205ENST00000409295 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
COPS7B-205ENST00000409295 CD2APQ9Y5K6 639 aa18.74■□□□□ 0.59
COPS7B-205ENST00000409295 DLG5Q8TDM6 1919 aa18.74■□□□□ 0.59
COPS7B-205ENST00000409295 GNAI1P63096 354 aa18.73■□□□□ 0.59
COPS7B-205ENST00000409295 FKBP8Q14318 412 aa18.73■□□□□ 0.59
COPS7B-205ENST00000409295 CICQ96RK0 1608 aaPredicted RBP18.73■□□□□ 0.59
COPS7B-205ENST00000409295 UBR2Q8IWV8 1755 aa18.73■□□□□ 0.59
COPS7B-205ENST00000409295 MYH14Q7Z406 1995 aaKnown RBP18.72■□□□□ 0.59
COPS7B-205ENST00000409295 TBC1D2BQ9UPU7 963 aa18.72■□□□□ 0.59
COPS7B-205ENST00000409295 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
COPS7B-205ENST00000409295 IFT57Q9NWB7 429 aa18.71■□□□□ 0.59
COPS7B-205ENST00000409295 EIF2S2P20042 333 aaKnown RBP18.7■□□□□ 0.58
COPS7B-205ENST00000409295 CCDC27Q2M243 656 aa18.7■□□□□ 0.58
COPS7B-205ENST00000409295 DZIP3Q86Y13 1208 aaKnown RBP18.7■□□□□ 0.58
COPS7B-205ENST00000409295 TM4SF1P30408 202 aa18.69■□□□□ 0.58
COPS7B-205ENST00000409295 PIP4K2AP48426 406 aaPredicted RBP18.69■□□□□ 0.58
COPS7B-205ENST00000409295 DIEXFQ68CQ4 756 aaKnown RBP18.69■□□□□ 0.58
COPS7B-205ENST00000409295 CCER2I3L3R5 266 aa18.68■□□□□ 0.58
COPS7B-205ENST00000409295 NGEFQ8N5V2 710 aa18.68■□□□□ 0.58
COPS7B-205ENST00000409295 ZNF652Q9Y2D9 606 aa18.68■□□□□ 0.58
COPS7B-205ENST00000409295 ERBB4Q15303 1308 aa18.68■□□□□ 0.58
COPS7B-205ENST00000409295 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
COPS7B-205ENST00000409295 NBPF26B4DH59 902 aa18.67■□□□□ 0.58
COPS7B-205ENST00000409295 ZNF853P0CG23 659 aa18.67■□□□□ 0.58
COPS7B-205ENST00000409295 GPR162Q16538 588 aa18.67■□□□□ 0.58
COPS7B-205ENST00000409295 NBPF10Q6P3W6 841 aaKnown RBP18.67■□□□□ 0.58
COPS7B-205ENST00000409295 WWC1Q8IX03 1113 aa18.67■□□□□ 0.58
COPS7B-205ENST00000409295 NBPF15Q8N660 670 aa18.67■□□□□ 0.58
COPS7B-205ENST00000409295 CHMP4AQ9BY43 222 aa18.67■□□□□ 0.58
COPS7B-205ENST00000409295 MBIPQ9NS73 344 aa18.67■□□□□ 0.58
COPS7B-205ENST00000409295 SALL2Q9Y467 1007 aaPredicted RBP18.67■□□□□ 0.58
COPS7B-205ENST00000409295 MYL6BP14649 208 aa18.66■□□□□ 0.58
COPS7B-205ENST00000409295 NFIXQ14938 502 aa18.66■□□□□ 0.58
COPS7B-205ENST00000409295 CLEC4GQ6UXB4 293 aa18.66■□□□□ 0.58
COPS7B-205ENST00000409295 BICDL1Q6ZP65 573 aa18.66■□□□□ 0.58
COPS7B-205ENST00000409295 PELP1Q8IZL8 1130 aaKnown RBP18.66■□□□□ 0.58
COPS7B-205ENST00000409295 CAMTA2O94983 1202 aa18.65■□□□□ 0.58
COPS7B-205ENST00000409295 HOXB7P09629 217 aa18.65■□□□□ 0.58
COPS7B-205ENST00000409295 NLGN2Q8NFZ4 835 aa18.65■□□□□ 0.58
COPS7B-205ENST00000409295 SETDB2Q96T68 719 aa18.65■□□□□ 0.58
COPS7B-205ENST00000409295 BCL2L12Q9HB09 334 aa18.65■□□□□ 0.58
COPS7B-205ENST00000409295 COL24A1Q17RW2 1714 aa18.65■□□□□ 0.58
COPS7B-205ENST00000409295 POLRMTO00411 1230 aaKnown RBP18.64■□□□□ 0.57
COPS7B-205ENST00000409295 NPHP1O15259 732 aa18.64■□□□□ 0.57
COPS7B-205ENST00000409295 TGFB2P61812 414 aa18.64■□□□□ 0.57
COPS7B-205ENST00000409295 KIF6Q6ZMV9 814 aa18.64■□□□□ 0.57
COPS7B-205ENST00000409295 RGL2O15211 777 aa18.63■□□□□ 0.57
COPS7B-205ENST00000409295 SERPINB2P05120 415 aa18.63■□□□□ 0.57
COPS7B-205ENST00000409295 DDR1Q08345 913 aa18.63■□□□□ 0.57
COPS7B-205ENST00000409295 DUSP27Q5VZP5 1158 aa18.63■□□□□ 0.57
COPS7B-205ENST00000409295 WDR63Q8IWG1 891 aa18.63■□□□□ 0.57
COPS7B-205ENST00000409295 NECTIN2Q92692 538 aa18.63■□□□□ 0.57
COPS7B-205ENST00000409295 IL16Q14005 1332 aa18.63■□□□□ 0.57
COPS7B-205ENST00000409295 KDM3BQ7LBC6 1761 aa18.63■□□□□ 0.57
COPS7B-205ENST00000409295 KRT24Q2M2I5 525 aa18.62■□□□□ 0.57
COPS7B-205ENST00000409295 HDGFL1Q5TGJ6 251 aa18.62■□□□□ 0.57
COPS7B-205ENST00000409295 TBC1D9BQ66K14 1250 aa18.62■□□□□ 0.57
COPS7B-205ENST00000409295 ERVV-1B6SEH8 477 aa18.61■□□□□ 0.57
COPS7B-205ENST00000409295 DDX21Q9NR30 783 aaKnown RBP eCLIP18.61■□□□□ 0.57
COPS7B-205ENST00000409295 ELL2O00472 640 aaPredicted RBP18.6■□□□□ 0.57
COPS7B-205ENST00000409295 GRIN3BO60391 1043 aa18.6■□□□□ 0.57
COPS7B-205ENST00000409295 DBF4Q9UBU7 674 aaPredicted RBP18.6■□□□□ 0.57
COPS7B-205ENST00000409295 NIP7Q9Y221 180 aaKnown RBP eCLIP18.59■□□□□ 0.57
COPS7B-205ENST00000409295 CARMIL3Q8ND23 1372 aa18.58■□□□□ 0.57
COPS7B-205ENST00000409295 C4AP0C0L4 1744 aa18.58■□□□□ 0.57
COPS7B-205ENST00000409295 MAP3K15Q6ZN16 1313 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms