RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 SLC15A2Q16348 729 aa34.66■■■■□ 3.14
CGREF1-204ENST00000402550 C4BP0C0L5 1744 aa34.66■■■■□ 3.14
CGREF1-204ENST00000402550 RC3H1Q5TC82 1133 aaKnown RBP34.66■■■■□ 3.14
CGREF1-204ENST00000402550 CRKLP46109 303 aaKnown RBP34.65■■■■□ 3.14
CGREF1-204ENST00000402550 EXOSC9Q06265 439 aaKnown RBP34.65■■■■□ 3.14
CGREF1-204ENST00000402550 STK32BQ9NY57 414 aa34.65■■■■□ 3.14
CGREF1-204ENST00000402550 CNTNAP4Q9C0A0 1308 aa34.63■■■■□ 3.13
CGREF1-204ENST00000402550 MYH14Q7Z406 1995 aaKnown RBP34.63■■■■□ 3.13
CGREF1-204ENST00000402550 C8orf58Q8NAV2 365 aa34.63■■■■□ 3.13
CGREF1-204ENST00000402550 INTS5Q6P9B9 1019 aaKnown RBP34.62■■■■□ 3.13
CGREF1-204ENST00000402550 CENPBP07199 599 aaPredicted RBP34.62■■■■□ 3.13
CGREF1-204ENST00000402550 AK7Q96M32 723 aa34.62■■■■□ 3.13
CGREF1-204ENST00000402550 CCDC87Q9NVE4 849 aa34.61■■■■□ 3.13
CGREF1-204ENST00000402550 TFCP2L1Q9NZI6 479 aa34.61■■■■□ 3.13
CGREF1-204ENST00000402550 ELL2O00472 640 aaPredicted RBP34.6■■■■□ 3.13
CGREF1-204ENST00000402550 GNPATO15228 680 aa34.58■■■■□ 3.13
CGREF1-204ENST00000402550 A1BGP04217 495 aa34.58■■■■□ 3.13
CGREF1-204ENST00000402550 HOXB7P09629 217 aa34.58■■■■□ 3.13
CGREF1-204ENST00000402550 CT47B1P0C2W7 299 aaPredicted RBP34.58■■■■□ 3.13
CGREF1-204ENST00000402550 TWISTNBQ3B726 338 aaPredicted RBP34.58■■■■□ 3.13
CGREF1-204ENST00000402550 TSPYL6Q8N831 410 aa34.58■■■■□ 3.13
CGREF1-204ENST00000402550 SOS1Q07889 1333 aaPredicted RBP34.58■■■■□ 3.13
CGREF1-204ENST00000402550 RPS6KA4O75676 772 aa34.57■■■■□ 3.12
CGREF1-204ENST00000402550 EIF2S2P20042 333 aaKnown RBP34.57■■■■□ 3.12
CGREF1-204ENST00000402550 R3HDM1Q15032 1099 aaKnown RBP34.57■■■■□ 3.12
CGREF1-204ENST00000402550 AMIGO3Q86WK7 504 aa34.57■■■■□ 3.12
CGREF1-204ENST00000402550 ZBTB1Q9Y2K1 713 aa34.57■■■■□ 3.12
CGREF1-204ENST00000402550 RTCBQ9Y3I0 505 aaKnown RBP34.55■■■■□ 3.12
CGREF1-204ENST00000402550 CANXP27824 592 aaKnown RBP34.54■■■■□ 3.12
CGREF1-204ENST00000402550 SMIM5Q71RC9 77 aa34.54■■■■□ 3.12
CGREF1-204ENST00000402550 CHMP4AQ9BY43 222 aa34.54■■■■□ 3.12
CGREF1-204ENST00000402550 LAMB4A4D0S4 1761 aa34.53■■■■□ 3.12
CGREF1-204ENST00000402550 UBR3Q6ZT12 1888 aa34.53■■■■□ 3.12
CGREF1-204ENST00000402550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.51■■■■□ 3.12
CGREF1-204ENST00000402550 PSDA5PKW4 1024 aaPredicted RBP34.51■■■■□ 3.12
CGREF1-204ENST00000402550 NBPF26B4DH59 902 aa34.51■■■■□ 3.12
CGREF1-204ENST00000402550 PIP4K2AP48426 406 aaPredicted RBP34.51■■■■□ 3.12
CGREF1-204ENST00000402550 NBPF10Q6P3W6 841 aaKnown RBP34.51■■■■□ 3.12
CGREF1-204ENST00000402550 NBPF15Q8N660 670 aa34.51■■■■□ 3.12
CGREF1-204ENST00000402550 NECTIN2Q92692 538 aa34.51■■■■□ 3.12
CGREF1-204ENST00000402550 ZNF428Q96B54 188 aa34.51■■■■□ 3.12
CGREF1-204ENST00000402550 PNPLA7Q6ZV29 1317 aa34.51■■■■□ 3.11
CGREF1-204ENST00000402550 VAMP4O75379 141 aa34.5■■■■□ 3.11
CGREF1-204ENST00000402550 SSFA2P28290 1259 aa34.5■■■■□ 3.11
CGREF1-204ENST00000402550 HDGFL1Q5TGJ6 251 aa34.5■■■■□ 3.11
CGREF1-204ENST00000402550 TUBGCP6Q96RT7 1819 aa34.5■■■■□ 3.11
CGREF1-204ENST00000402550 PHF14O94880 888 aa34.49■■■■□ 3.11
CGREF1-204ENST00000402550 IL6STP40189 918 aaPredicted RBP34.49■■■■□ 3.11
CGREF1-204ENST00000402550 EIF5P55010 431 aaKnown RBP34.49■■■■□ 3.11
CGREF1-204ENST00000402550 TRAPPC3LQ5T215 181 aa34.49■■■■□ 3.11
CGREF1-204ENST00000402550 FLAD1Q8NFF5 587 aa34.49■■■■□ 3.11
CGREF1-204ENST00000402550 COL23A1Q86Y22 540 aaPredicted RBP34.48■■■■□ 3.11
CGREF1-204ENST00000402550 PDGFDQ9GZP0 370 aaPredicted RBP34.48■■■■□ 3.11
CGREF1-204ENST00000402550 PDIA6Q15084 440 aa34.47■■■■□ 3.11
CGREF1-204ENST00000402550 CACNA1FO60840 1977 aa34.47■■■■□ 3.11
CGREF1-204ENST00000402550 ERBB4Q15303 1308 aa34.46■■■■□ 3.11
CGREF1-204ENST00000402550 ADRA2BP18089 450 aa34.46■■■■□ 3.11
CGREF1-204ENST00000402550 ARHGEF1Q92888 912 aaKnown RBP34.46■■■■□ 3.11
CGREF1-204ENST00000402550 QSER1Q2KHR3 1735 aa34.46■■■■□ 3.11
CGREF1-204ENST00000402550 CCDC30Q5VVM6 783 aa34.45■■■■□ 3.1
CGREF1-204ENST00000402550 RCAN3Q9UKA8 241 aa34.44■■■■□ 3.1
CGREF1-204ENST00000402550 MYL6BP14649 208 aa34.43■■■■□ 3.1
CGREF1-204ENST00000402550 ZNF330Q9Y3S2 320 aaPredicted RBP34.43■■■■□ 3.1
CGREF1-204ENST00000402550 DDX21Q9NR30 783 aaKnown RBP eCLIP34.42■■■■□ 3.1
CGREF1-204ENST00000402550 CHPF2Q9P2E5 772 aa34.42■■■■□ 3.1
CGREF1-204ENST00000402550 DBF4Q9UBU7 674 aaPredicted RBP34.42■■■■□ 3.1
CGREF1-204ENST00000402550 MSH5O43196 834 aa34.41■■■■□ 3.1
CGREF1-204ENST00000402550 PROSER3Q2NL68 480 aa34.41■■■■□ 3.1
CGREF1-204ENST00000402550 STK31Q9BXU1 1019 aa34.41■■■■□ 3.1
CGREF1-204ENST00000402550 COL15A1P39059 1388 aa34.41■■■■□ 3.1
CGREF1-204ENST00000402550 ANXA1P04083 346 aa34.4■■■■□ 3.1
CGREF1-204ENST00000402550 RFC4P35249 363 aa34.4■■■■□ 3.1
CGREF1-204ENST00000402550 ALDH1L2Q3SY69 923 aa34.4■■■■□ 3.1
CGREF1-204ENST00000402550 NPM2Q86SE8 214 aaKnown RBP34.4■■■■□ 3.1
CGREF1-204ENST00000402550 LRP10Q7Z4F1 713 aa34.4■■■■□ 3.1
CGREF1-204ENST00000402550 RARSP54136 660 aaKnown RBP34.38■■■■□ 3.09
CGREF1-204ENST00000402550 A0A087WZG4 1122 aa34.37■■■■□ 3.09
CGREF1-204ENST00000402550 SMC4Q9NTJ3 1288 aa34.37■■■■□ 3.09
CGREF1-204ENST00000402550 TCERG1O14776 1098 aaKnown RBP34.36■■■■□ 3.09
CGREF1-204ENST00000402550 TBC1D2BQ9UPU7 963 aa34.36■■■■□ 3.09
CGREF1-204ENST00000402550 SLC16A10Q8TF71 515 aa34.36■■■■□ 3.09
CGREF1-204ENST00000402550 SSH1Q8WYL5 1049 aa34.35■■■■□ 3.09
CGREF1-204ENST00000402550 ARXQ96QS3 562 aa34.35■■■■□ 3.09
CGREF1-204ENST00000402550 NARFQ9UHQ1 456 aa34.35■■■■□ 3.09
CGREF1-204ENST00000402550 CASZ1Q86V15 1759 aa34.34■■■■□ 3.09
CGREF1-204ENST00000402550 HYPKQ9NX55 129 aa34.34■■■■□ 3.09
CGREF1-204ENST00000402550 C4AP0C0L4 1744 aa34.33■■■■□ 3.09
CGREF1-204ENST00000402550 DZIP3Q86Y13 1208 aaKnown RBP34.33■■■■□ 3.09
CGREF1-204ENST00000402550 BCL2L13Q9BXK5 485 aa34.33■■■■□ 3.09
CGREF1-204ENST00000402550 SRP68Q9UHB9 627 aaKnown RBP34.33■■■■□ 3.09
CGREF1-204ENST00000402550 USP42Q9H9J4 1324 aaKnown RBP34.33■■■■□ 3.09
CGREF1-204ENST00000402550 ZPR1O75312 459 aa34.32■■■■□ 3.09
CGREF1-204ENST00000402550 SLC4A2P04920 1241 aa34.32■■■■□ 3.08
CGREF1-204ENST00000402550 COPS6Q7L5N1 327 aa34.32■■■■□ 3.08
CGREF1-204ENST00000402550 TTLL7Q6ZT98 887 aa34.31■■■■□ 3.08
CGREF1-204ENST00000402550 USPL1Q5W0Q7 1092 aa34.3■■■■□ 3.08
CGREF1-204ENST00000402550 ZBTB7AO95365 584 aa34.29■■■■□ 3.08
CGREF1-204ENST00000402550 GYS1P13807 737 aa34.29■■■■□ 3.08
CGREF1-204ENST00000402550 AIMP1Q12904 312 aaKnown RBP34.29■■■■□ 3.08
CGREF1-204ENST00000402550 XAGE3Q8WTP9 111 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms